Os08g0462300

From RiceWiki
Revision as of 20:51, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0462300

Description

Cyclin-like F-box domain containing protein

Version

NM_001068520.1 GI:115476777 GeneID:4345772

Length

1980 bp

Definition

Oryza sativa Japonica Group Os08g0462300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:22780357..22782336

Sequence Coding Region

22780595..22780882,22781070..22781219,22781471..22782289

Expression

GEO Profiles:Os08g0462300

Genome Context

<gbrowseImage1> name=NC_008401:22780357..22782336 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:22780357..22782336 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgcgcgaagaatatagggccaagcgccgccgtttgccggcggcggagccggacttcctggccggcctcccgccggagatcgtcgacgacatcatctcccgcctcgacatacgcgacgtcgtccgcacctccgccctctcccgcgcctggcgccgccgctgggagtccgtccgcggcctcgacctcagcttcagatcctccgcccccgccgccgccatctcctccgtcctgaagcgcgccgccgcgccggtccgcgggctcggcctccgagtccccggtcgccggttccgccgcgccgtccactggctccgcctcctcccccgcaagcgcgtccagtccctcgacctccacttcgagttcgtgttcggcgagaagcccagcctcgaccccagcatcctctcctgcctggagctcaccacgctggtcctcgagggctgcatcttcccgccgtcgccgccgccgccgtcgtttgtggggttcccggagttgaccaagctgtccctctccgagatcgacctcccgcgccacggggggaggcggctggaggcgatgatcgccgcgtcgccgcttctcgtcgagctgtctctctcgaacgtgcgcagcctccatcactgggagaggtggttcatccggggaccaaacctccggtccgtttggatctggacggattacgattatggctgcaggataggggagctcccgcggctagagcacgccatcgtcttcgcgtcggccatcaagactgaagttttgtgcaaaattctggaagggattagtcatgcggagactcttggattcgatgcaattacagaccagttcaatggtaacccaccggagaggttttcattcacttttcagaacttgaggtcgttggacctgcatgcttgtctagatcaaatctcaagtacttcttgggtcttttgcatacttagaagtgccccgaacctggaaacacttgaaatcgaggttgattgtgatgatgatgaagtggatgctggatctgtcgaaggattcgcaaacgcacaagcaagtgatgacattttccctagacttcgagatgtctggttacatagtattgactgctcctcaaatgagatgtgcttcatcaagtttgtcctatccaaagcaagatcgctagaactgttctctgttcgtgtcacctccagtaggttatcttatcaggaggcatgcatagagatggcaaaatacaaaagagcatcgccgttagctaagctcagactcatccgtggatga</cdnaseq>

Protein Sequence

<aaseq>MPREEYRAKRRRLPAAEPDFLAGLPPEIVDDIISRLDIRDVVRT SALSRAWRRRWESVRGLDLSFRSSAPAAAISSVLKRAAAPVRGLGLRVPGRRFRRAVH WLRLLPRKRVQSLDLHFEFVFGEKPSLDPSILSCLELTTLVLEGCIFPPSPPPPSFVG FPELTKLSLSEIDLPRHGGRRLEAMIAASPLLVELSLSNVRSLHHWERWFIRGPNLRS VWIWTDYDYGCRIGELPRLEHAIVFASAIKTEVLCKILEGISHAETLGFDAITDQFNG NPPERFSFTFQNLRSLDLHACLDQISSTSWVFCILRSAPNLETLEIEVDCDDDEVDAG SVEGFANAQASDDIFPRLRDVWLHSIDCSSNEMCFIKFVLSKARSLELFSVRVTSSRL SYQEACIEMAKYKRASPLAKLRLIRG</aaseq>

Gene Sequence

<dnaseqindica>1455..1742#1118..1267#48..866#aaatgcgatttgcgaagtaaaatcgacggcgacccaaaaagggaaaaatgccgcgcgaagaatatagggccaagcgccgccgtttgccggcggcggagccggacttcctggccggcctcccgccggagatcgtcgacgacatcatctcccgcctcgacatacgcgacgtcgtccgcacctccgccctctcccgcgcctggcgccgccgctgggagtccgtccgcggcctcgacctcagcttcagatcctccgcccccgccgccgccatctcctccgtcctgaagcgcgccgccgcgccggtccgcgggctcggcctccgagtccccggtcgccggttccgccgcgccgtccactggctccgcctcctcccccgcaagcgcgtccagtccctcgacctccacttcgagttcgtgttcggcgagaagcccagcctcgaccccagcatcctctcctgcctggagctcaccacgctggtcctcgagggctgcatcttcccgccgtcgccgccgccgccgtcgtttgtggggttcccggagttgaccaagctgtccctctccgagatcgacctcccgcgccacggggggaggcggctggaggcgatgatcgccgcgtcgccgcttctcgtcgagctgtctctctcgaacgtgcgcagcctccatcactgggagaggtggttcatccggggaccaaacctccggtccgtttggatctggacggattacgattatggctgcaggataggggagctcccgcggctagagcacgccatcgtcttcgcgtcggccatcaagactgaagttttgtgcaaaattctggaagggattagtcatgcggagactcttggattcgatgcaattacagaccaggtactttactttgctagttgcttcaccgtgcgtcccgtgccctccaaatttttaattaacagttagcaaaccatgaaacttaaaatccttttacagtttttatactcactagtgggtaaaaattagagcagctcaatgtaaactcgaatctaaattcagtggtaattcaccagaggtttttattcacatttgaggttattacacctggattcttgtctagaccaaatctaatgtactattgtgatttgcagttcaatggtaacccaccggagaggttttcattcacttttcagaacttgaggtcgttggacctgcatgcttgtctagatcaaatctcaagtacttcttgggtcttttgcatacttagaagtgccccgaacctggaaacacttgaaatcgaggtaatgtagaaaaccccagaaagttactttacatattatggttcctagatggctagatcgtgaatgcgcaaacaattcgcggatcttttcaataagcagagagttccaatatctgttttggctgattgagttatttatttgcatttataacatttgcaattcacaaattatgttcttcctttggtaggttgattgtgatgatgatgaagtggatgctggatctgtcgaaggattcgcaaacgcacaagcaagtgatgacattttccctagacttcgagatgtctggttacatagtattgactgctcctcaaatgagatgtgcttcatcaagtttgtcctatccaaagcaagatcgctagaactgttctctgttcgtgtcacctccagtaggttatcttatcaggaggcatgcatagagatggcaaaatacaaaagagcatcgccgttagctaagctcagactcatccgtggatgactggctagcttgactttgcagagcacctgaacttctcatgctttttcatcccattgtttgtattcagtgaaagatatctctgttgaactgtgtggatgttgaatttccatcaggcaacatgcatgacatctgcaatagtgtgcctatgtaggtaatgcatactgcttgcctatatattttgatgaagtttaaataatgccttcccattgttattaattcccgaatgaggattcaatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0462300, RefSeq:Os08g0462300