Os08g0485700
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os08g0485700 |
|---|---|
| Description |
Methyl-CpG binding domain containing protein |
| Version |
NM_001068625.1 GI:115476987 GeneID:4345880 |
| Length |
5594 bp |
| Definition |
Oryza sativa Japonica Group Os08g0485700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:24103067..24108660 |
| Sequence Coding Region |
24103227..24103909,24105325..24105466,24105540..24106784,24107700..24108287 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:24103067..24108660 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:24103067..24108660 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggagacggaggtgttccccgtggttgacctccgcgtgctctcgcagtccgacctggaagcgctcgccgccgcctcagcccacgcggtggccccggggggcagctgccccgacgccgaccaactcccgccgctgaagatcgaccgcgccgtcttcaacgagagcgccggctcgcgcaagcagaccttctcccgcgtccgcttcggcgccgccgccgccgtcgccgcctccccttcctccccctccccctccgccgccgccaagctgcccaggggcaacgacaaggaggacagcttcatcgcctaccacctccgccgcctcttcgcgcccgacgacccctcctctccccaaatccaaaccctagctctacccgcgccgccgtctcccgaccccgaccagttgaccaccaactccaagggggtctccgttgatctggtgagcctctcacggcttgccgacccgtacgacgcggagctcgggaagcggactgcggggatgaccacggaggaggagctgatgggcttcatctctagcctcgcgggtcagtgggtgagccagaggatgcggaggaagttagttgatgcgtccttcttcggggatcacctccccagcgggtggaggctgcagcttgggatcaagcggaaggaccgcaaggcctgggtgaactgcttcagttatgtgagccccaagggacagagttttgctacttgccaagaggtttctgcatacctcatgtcccttcttgggtatccggagttcaaaacggataatattgagtatggtagcacacaacaacatggcttgtgtgctgacgatggtgttaatgttttaggtgttcaacaccaaattggtacaggtatggacagtcaaagtattttgccagttgcttctattaccttttctagtcattcaagagatcaagacgaaacagatgcagatgatataaattcttatgaatgtcaacaatgcaatttaacttttcatggtcagagtgcctatgcgcatcacctgatcacttttcacaaaatgggttctaaaaggcgtaagattaacaaggttggcaaatttggtgagccagtgataggcaaagatgggaaatttgaatgcccagtatgtaataagacgtttgaggaacagtcacggtactttggtcacgttggatcccatgcaaagtatcacgggctgactcctgaagcattcctacaaaccttgtcaggaaaggttggtaacgattcttttgcaggtttgtcatgtagccttcaagatttggtcggatcaccacaactgaatgagaagactactgctagtgaagcacgatcacagcatcacaattgttcaactaaacatggaggcaatagtacaagaggtatagacctttttaactcaaattgtccagctaacttcaatgggcataatcaaacttggtgtagacctgatgaaattcctcccaccacagatgctccaagcacatggacttatagaaataatgtgacgaactgtgctgatagaactgttccgagaacagcacctcagcccaatgatcacatggattgcagggttagtggctttgctgaagcaactaattttaacgatcaagcaggaagacaccaaggttttagaccttcctcctttggaactaccaaccattgtcaaggccagataattgatcatgcagtagctgcttccaagcatgctgaggttaataatagtatgaaatcaagagatgtcaacctcaattcacgcctgaacacaatatcctttcctattgcaactgcgaacaatgaaacatcgactgcccttaatgacgtgaatcggtcatgcattactggaaaaggttttagtggaagtttcagtaacaatgatggtgctgcatctatcgtgttgcccagttctggattaaacaataaaattcctagctccctcggtgtagctgacagatcatctattgctgcaagatctttcaatgctggttatgttaatgaaaatggtgcttctgaagctaacaatattggcaacaaaaacaataccatggtgtatcagacaagtttggccatgcgcccagtctctccttgtgatctgcaacttggatttagtggtcagaagcagcagatattgcctggttatggagaacttagaccagctgcgtctgggtcccctcagcttgggggcatggcagcaaacagttcaattcccaccagaccctctcagccgcagtttgggagtatggccagaaccgatgctttgcctactggaccctctcaaccagggagcttggccagacctaattttgtgcccacaggattttctcagtttgcaagcaggccacctacttctgtaccaccagccgattcctctcagtttgcagggggcatggccaggcaaaacattccgaccacgtctgaaccaactctagtattgggctatactcctcagatggtcaatggccctccagcccagctaggatgggatctatctttgtcaaggatggtcagtgaaggcatgctcccagtgttatgtatatggtgcaacagccaattccaccattttggccccattgatgcacagcaatctggttcgtttggtttcatttgcccagcttgcaaggagaagatgtcaggcaatcctaatgcgcccaataacggtccatggcaaccatga</cdnaseq> |
| Protein Sequence |
<aaseq>METEVFPVVDLRVLSQSDLEALAAASAHAVAPGGSCPDADQLPP LKIDRAVFNESAGSRKQTFSRVRFGAAAAVAASPSSPSPSAAAKLPRGNDKEDSFIAY HLRRLFAPDDPSSPQIQTLALPAPPSPDPDQLTTNSKGVSVDLVSLSRLADPYDAELG KRTAGMTTEEELMGFISSLAGQWVSQRMRRKLVDASFFGDHLPSGWRLQLGIKRKDRK AWVNCFSYVSPKGQSFATCQEVSAYLMSLLGYPEFKTDNIEYGSTQQHGLCADDGVNV LGVQHQIGTGMDSQSILPVASITFSSHSRDQDETDADDINSYECQQCNLTFHGQSAYA HHLITFHKMGSKRRKINKVGKFGEPVIGKDGKFECPVCNKTFEEQSRYFGHVGSHAKY HGLTPEAFLQTLSGKVGNDSFAGLSCSLQDLVGSPQLNEKTTASEARSQHHNCSTKHG GNSTRGIDLFNSNCPANFNGHNQTWCRPDEIPPTTDAPSTWTYRNNVTNCADRTVPRT APQPNDHMDCRVSGFAEATNFNDQAGRHQGFRPSSFGTTNHCQGQIIDHAVAASKHAE VNNSMKSRDVNLNSRLNTISFPIATANNETSTALNDVNRSCITGKGFSGSFSNNDGAA SIVLPSSGLNNKIPSSLGVADRSSIAARSFNAGYVNENGASEANNIGNKNNTMVYQTS LAMRPVSPCDLQLGFSGQKQQILPGYGELRPAASGSPQLGGMAANSSIPTRPSQPQFG SMARTDALPTGPSQPGSLARPNFVPTGFSQFASRPPTSVPPADSSQFAGGMARQNIPT TSEPTLVLGYTPQMVNGPPAQLGWDLSLSRMVSEGMLPVLCIWCNSQFHHFGPIDAQQ SGSFGFICPACKEKMSGNPNAPNNGPWQP</aaseq> |
| Gene Sequence |
<dnaseqindica>161..843#2259..2400#2474..3718#4634..5221#ctcgtggagccccaacccaactacgccgccgccacctcatccccccggcgagcgacacggtcgcatcccaccggagctccgaccgccgcagcggcggtcgcctcgccggagaagaagccgcgtgggggggaaggcggaggagggggggggtgggggtgcaatggagacggaggtgttccccgtggttgacctccgcgtgctctcgcagtccgacctggaagcgctcgccgccgcctcagcccacgcggtggccccggggggcagctgccccgacgccgaccaactcccgccgctgaagatcgaccgcgccgtcttcaacgagagcgccggctcgcgcaagcagaccttctcccgcgtccgcttcggcgccgccgccgccgtcgccgcctccccttcctccccctccccctccgccgccgccaagctgcccaggggcaacgacaaggaggacagcttcatcgcctaccacctccgccgcctcttcgcgcccgacgacccctcctctccccaaatccaaaccctagctctacccgcgccgccgtctcccgaccccgaccagttgaccaccaactccaagggggtctccgttgatctggtgagcctctcacggcttgccgacccgtacgacgcggagctcgggaagcggactgcggggatgaccacggaggaggagctgatgggcttcatctctagcctcgcgggtcagtgggtgagccagaggatgcggaggaagttagttgatgcgtccttcttcggggatcacctccccagcgggtggaggctgcagcttgggatcaagcggaaggaccgcaaggcctgggtgaactgcttcagttatgtgaggtgagcctcatcatcctttactgacaaatgctgcaatgttaggggatctgttgttagtaactggaatgggggttataaattgcaataagctagctgcctggatgcttgctatgatgtttagagatgcggttatgtgtgactatagatgcaaacttgcaaaggatgtgtggtggatttggtttgtgaagattgttttatactcttctagcgtagtcaactgatgctaatcaatccgtgcacaagtttatcagatcagttcttgacagttttgaatgattgatttttttttcaacatggccttcttgctgtcattctgtggattgcctactttctaaggaagaataaatcttattggttaacaataactgaacaccccctaggatgagctgtttcatgacgagggggaaatgctatggctggcctcaggattagcatgtgctgcagcaattggagaatcatagtagacaaatagatattctactccttatttctccattagagtttcctagttttgtcattggagtcctagtagtattagatactagtttgtttcctttgccttatctagaggcacctcaatatacaaaggtagcctagtactggattatgccttaagcaataagaaatatctaaaggggattgacccaaaagcccagtcgtttcaatgacatactagttaaatgataattctgaatattctggggggcaaagacatgacttttgcctaccatagtataagagcagcgtggagtgttattgctttaagataatgagttttgttttattcctttgatatttgtttttcggcacttcatttgatctgtgcttttaaggcatgcatgttatgcgattgcagcagcattatctagcaatggcttgattgatgcttactatatcataggttaaacattaagatagattcgtatggcacatatgatatctcaagtacataacataacacatgtatgtgtaaatttgcttctcctgccgagttctcactgatacacaggtcctaatccaacttgtcaatgagaaccagtggataaagtgaattaaggccatggcatggtgtctaaaacaatcattaattttcatttgctttatttaactgcaatgcctatttgaagtagtgactagagcacatgagcatttcaatcattatctcgaatgttccacagaactcaggtgttccaccatatatgctcagatttatcatctgtcgttgatgaataattttgttgtaataatagtaaagatcacttctcatcactattagtttgaaagtacgtgttaagatacatgcctatttatctgctcagtgaacatatgttgtgaatggctgcatcatttcagcgcaataattttgtttgtcgcattttttcccctgtactaaatgggcatattgtactttccagccccaagggacagagttttgctacttgccaagaggtttctgcatacctcatgtcccttcttgggtatccggagttcaaaacggataatattgagtatggtagcacacaacaacatggcttgtgtgctgacgatggtgttaatgtaagttgaaagtgtatgtcactttatcttgtgaacttgagtttgtctagtttaatttttgggtttgtggcaggttttaggtgttcaacaccaaattggtacaggtatggacagtcaaagtattttgccagttgcttctattaccttttctagtcattcaagagatcaagacgaaacagatgcagatgatataaattcttatgaatgtcaacaatgcaatttaacttttcatggtcagagtgcctatgcgcatcacctgatcacttttcacaaaatgggttctaaaaggcgtaagattaacaaggttggcaaatttggtgagccagtgataggcaaagatgggaaatttgaatgcccagtatgtaataagacgtttgaggaacagtcacggtactttggtcacgttggatcccatgcaaagtatcacgggctgactcctgaagcattcctacaaaccttgtcaggaaaggttggtaacgattcttttgcaggtttgtcatgtagccttcaagatttggtcggatcaccacaactgaatgagaagactactgctagtgaagcacgatcacagcatcacaattgttcaactaaacatggaggcaatagtacaagaggtatagacctttttaactcaaattgtccagctaacttcaatgggcataatcaaacttggtgtagacctgatgaaattcctcccaccacagatgctccaagcacatggacttatagaaataatgtgacgaactgtgctgatagaactgttccgagaacagcacctcagcccaatgatcacatggattgcagggttagtggctttgctgaagcaactaattttaacgatcaagcaggaagacaccaaggttttagaccttcctcctttggaactaccaaccattgtcaaggccagataattgatcatgcagtagctgcttccaagcatgctgaggttaataatagtatgaaatcaagagatgtcaacctcaattcacgcctgaacacaatatcctttcctattgcaactgcgaacaatgaaacatcgactgcccttaatgacgtgaatcggtcatgcattactggaaaaggttttagtggaagtttcagtaacaatgatggtgctgcatctatcgtgttgcccagttctggattaaacaataaaattcctagctccctcggtgtagctgacagatcatctattgctgcaagatctttcaatgctggttatgttaatgaaaatggtgcttctgaagctaacaatattggcaacaaaaacaataccatggtgtatcagacaagtttggccatgcgcccagtctctcctgtaagtaacatggattgcttcatttcctgttcagtgcatttaaaaatagcaacagacatctgtatgatacaaatgaatgaatggatagcatacaaaacaaaactagtaactaagctagattttctgttgatgcttataataataaaatcttgactggcagtgtcactgaaaggagtctacccagtgtaatagaaactccagtcacgtaggacctaatatttcaagccacgattcatcacttcctaaatcaagcacactagcagccagtaacttaagcaaggggagtgatgtcaactggaaggtttcttttgttaatagaagcaattccaactgcataatgggctcttttgttacccactagtttctgcttgaggttttgggaaggactagtagtgttatgcaaaatcgatacaatgattgtgccactgcttgtaacttgctcgcttcagcaagtactagccagaatgccaacaatcttatgcctatgtaggacaattttggtcatgtgtagtttacgctctggtttgttctgttggtgatgttccaatcagcagcacaaccagagatcaggtagactgcatcaaacattctttttagtctgatcactcctgtgatgtttaaaaatgctttcgatattttatttttgtaaatctagtggaacccagtaatataatgcctctttaggtcagttcatttgacataaatcaaccagtataattagactatgcaataggaaaggaggaaatgaacattgtgtttctcaagactattgcttataagttgttttgcttttgtcattgttaccagttttgttaaagtgtgcatagagtgaatggttttttcctctcatgaacgactatgacatttcatgctgagtgtcctacatgctgatttgatcttatttttcctacacagtgtgatctgcaacttggatttagtggtcagaagcagcagatattgcctggttatggagaacttagaccagctgcgtctgggtcccctcagcttgggggcatggcagcaaacagttcaattcccaccagaccctctcagccgcagtttgggagtatggccagaaccgatgctttgcctactggaccctctcaaccagggagcttggccagacctaattttgtgcccacaggattttctcagtttgcaagcaggccacctacttctgtaccaccagccgattcctctcagtttgcagggggcatggccaggcaaaacattccgaccacgtctgaaccaactctagtattgggctatactcctcagatggtcaatggccctccagcccagctaggatgggatctatctttgtcaaggatggtcagtgaaggcatgctcccagtgttatgtatatggtgcaacagccaattccaccattttggccccattgatgcacagcaatctggttcgtttggtttcatttgcccagcttgcaaggagaagatgtcaggcaatcctaatgcgcccaataacggtccatggcaaccatgataactgttgtggctggtctacaatcatttctgttgctggatctttggtctaaggttagctgcggtgtgcctgcaccccagagttttagtagggtatctaggaacgatgtctgtattttgtggactctcttctgtacgtacttctgttgaaatgtgaagaaaaccccaagagaaaaacccactgaatgttgtacttttggcaggatggatctccagtaagattcaagggttgtacgcagccatcatccaaaaagagtttatgagatagattttgatgtagtattattgtttggcaacaaaggtacaagttgatcgcacgctgatcgcgtgatagacctggtactggtagaatccatacgacaacgatttggacg</dnaseqindica> |
| External Link(s) |
