Os08g0490000
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os08g0490000 |
|---|---|
| Description |
Basic helix-loop-helix dimerisation region bHLH domain containing protein |
| Version |
NM_001068644.1 GI:115477025 GeneID:4345899 |
| Length |
6241 bp |
| Definition |
Oryza sativa Japonica Group Os08g0490000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:24310417..24316657 |
| Sequence Coding Region |
24310570..24310582,24310697..24310819,24311488..24311736,24313764..24313967,24314111..24314240 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:24310417..24316657 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:24310417..24316657 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggactgcaagggaataaggcgacgcacgacttcctctcgctgtacgccgccgccgccaccgccacggactactcgccgctcccgcgccacccggactccaagccctcggcgccggcgccgccgcccgctcaagatttcttcctcaagacacacgacttcctgccgcaggtagagaagagagccgaccagacaccaccgccgccgccgccgccgccgccccacgccgcggtcaccgccgagaagcagctgctccaccagcacgcgttggccgccgccggcgcgttcaccatcaaccacgccgtggccgcggccgccaccgccgtcaagcaggagccgcccttcgcgccgtggtgccagcccgtcgccgccgtagatccccgaggtcaccagtggtcgctccccttcgccgcgcgcgccgtcgccgtcgcctcctccaggccgcagcagcagcagcagcagccaccgccgccggagaggaagggtggcggtggattcatggacgccggctccagatccagtggcggcgcgggcttcgacgacgacgacggccatgccgcgcgccgcgaggtctcctcctcgctgaaagagctcacggtcagggtggaagggaaaggtgggagctgcagcggcagcgctggcacggatcagatgccgaacacgccgcgctcgaagcactccgccaccgagcagcgcaggcgcagcaaaatcaacgacagatttcaacttcttagagacttattgcctcataatgatcaaaagagagacaaagcatcatttctcttagaggttattgaatacatacggtttttacaagagaaagtacaaaagtatgaggtttcatacccggagtggaaccaagaaaatgcaaaggttgtgccatggacaaacatctatttccgttcttcctggaaaaatgcgcagaacaaaggccaagttcctgcagatcattcacctgaccctccagaacttctgaaaaatggttccccctatatgttcccttttacagggaactctgataataacaatgcagttgaaactgcagctgcttcaggtgcacaggatcaggcagaaactgatccaatgagtcgtgtgtcttacagatcagtggacactcccagtcccaataatgttgcagacaaagttacatctcagccacacgctcaactggtgagaccatcacctgcagagaatcacacagtaaactgcgacaagttaaataattctgaccttgccatcgatgagggaacaatcagtctatcaagccaatattcccaagagttgcttaacaagttgaatcatgccctggaaaactcgggtatagatttgtcccaagccagcatctccgtgcaaataaatcttggcaagagggctatgaagagatctactcctgctgcaacctccacttctaaggagctcactgatccggcatctaatagtcaagcaatgggccgtcagcttaggttgggtgatggcgctgaagaacatcgacaagcctcaaagcgacacaaatcagataacagctga</cdnaseq> |
| Protein Sequence |
<aaseq>MGLQGNKATHDFLSLYAAAATATDYSPLPRHPDSKPSAPAPPPA QDFFLKTHDFLPQVEKRADQTPPPPPPPPPHAAVTAEKQLLHQHALAAAGAFTINHAV AAAATAVKQEPPFAPWCQPVAAVDPRGHQWSLPFAARAVAVASSRPQQQQQQPPPPER KGGGGFMDAGSRSSGGAGFDDDDGHAARREVSSSLKELTVRVEGKGGSCSGSAGTDQM PNTPRSKHSATEQRRRSKINDRFQLLRDLLPHNDQKRDKASFLLEVIEYIRFLQEKVQ KYEVSYPEWNQENAKVVPWTNIYFRSSWKNAQNKGQVPADHSPDPPELLKNGSPYMFP FTGNSDNNNAVETAAASGAQDQAETDPMSRVSYRSVDTPSPNNVADKVTSQPHAQLVR PSPAENHTVNCDKLNNSDLAIDEGTISLSSQYSQELLNKLNHALENSGIDLSQASISV QINLGKRAMKRSTPAATSTSKELTDPASNSQAMGRQLRLGDGAEEHRQASKRHKSDNS </aaseq> |
| Gene Sequence |
<dnaseqindica>154..166#281..403#1072..1320#3348..3551#3695..3824#4441..4510#4597..4731#4827..5040#5145..5286#5461..5593#5828..5941#gagagagaggaactgaggaagcgaagcgaagcgagagaggaggagaaagcccggagagcttgccctcgccgcgccgcggagatccgcttccccatccccccaacacgtcgccgccgccgccgccttccttgctgcgcggggtaatgcgcggccatgggactgcaaggtacgcgcgctctctctctcctcttccctgttcgttcgttcgttcgctcgccggagtgggggttttcgccgaggttttctcctcctgagatcgatttggttgatgtatacgcagggaataaggcgacgcacgacttcctctcgctgtacgccgccgccgccaccgccacggactactcgccgctcccgcgccacccggactccaagccctcggcgccggcgccgccgcccgctcaaggtgagctagctcacgcaattttttttttctcccggatggtgaggtggatctcccgtctcgaaatactttgccaaattcggcatagttttttttttcttttcttgttctcgtgtgaaaccacacagaattaaccagaacggatcaaggaattgctaccgtcataatcctactatttgcagtggtttaaaaactaaatactaggagtatatcattatggtttatgtcttgtggaaaaagataaacttttttgcgatgtttggtcaaggaaaacgacgagttaacgaagggaaatgatcacgtgtagctaggctgtgtgtgtgagagagagagagggggcacgatgcaaagagacgtccacgacttcctttctgttgcagtctacgattttctttttcaaaaattccgaatgttagtgtgcaaaagtggtcggcatatcattattcttgcaggttgtcatgccagatcattatcggtcgatcagatctccgcaagttggttttcgaattcgtattcttattattactacaagtttaaactgttttcatccaaaccactcgatccactccatattatgcatgctaaattgcacaaaaaaaaagtaattgagagatggatttttgatggattttttttcgatgatgctgaacttgtgatcatttccgttgcagatttcttcctcaagacacacgacttcctgccgcaggtagagaagagagccgaccagacaccaccgccgccgccgccgccgccgccccacgccgcggtcaccgccgagaagcagctgctccaccagcacgcgttggccgccgccggcgcgttcaccatcaaccacgccgtggccgcggccgccaccgccgtcaagcaggagccgcccttcgcgccgtggtgccagcccgtcgccgccgtagatccccgaggtacgcccgtgctctcgtcgcttgcgccttcgatcgcgatcgtcgtgagccgcgccgcgcgcgtggcggtgcccgccggtggttgggcgcgccgcgcgccacctcctccacgtgcccggcgcggcgccttcctcctcctccggtggttggggcgtcggcgtcgccgccgcgcggcgagcacgtcgacgcacgcgcgcgacgcgcgtagctggtggccacccgctgacacgcggaggcggtagggggatggtagggtgggcggggctagggagtaggcgagtaggcctggccggccgcacgggggacgtgggctcgctgggcccggatgcgtgtgggggacgggcctggacgtgggccagaggctgcgtgctgggtgcacgtggatagcagcatgggcccgggtacgggcctggttgtgggccatgggacgtgagcactagagcgctcgcttttctggatagacccggaccacaagtaatactgggacaagcagatgaatccactttcaaacttaaaaaagcttactttgtatatgaattttattctatagaatggaggaggtagtaaatcatattgccatttgttatatatcattgtattattaggattttataagtgaagcttgggctttacgataagagttaattaaagtgttcatagtccactaaaaaaagtgttaatagattctgtagtatttttcacaggaaacaatgtgactaatgtgaaaatcattacatctaagggcttcttttgaatcaaaggaattatgatgaatttcataaaattaaaattctatatagagtaaatttcacaaaactacatatactatgacaaaattattacaaaactacatatttaactcaatgtatcacaaaactatacatttaacatcaaatttatcacaaaactacacatttaagatgaagtgtcacaaaattacatgtttagtaactaaattatcataaaattacaggtttagaaccaatttgatcacaaagtaataatgtttataactccaccataacaatggtgctagggatttaaactccaaaagttgtagttttgtgataagtttcatattaaatatgcatttttgtgatacttaacctaaaatctgcagttttgtgataaatttggtgctaaatgtgtagttttatgatacaactccttaagtatgtagttttgtgataatttgatcaaaatacatgtagttttgtgaaatttactcttctatataaaattttcatatgtagcccttttattaaaaagattgaagttttcctaatccaataaaattcctatagagtaatagaatggttcattacatataaattttggagaaaacttagtaagaggttcaacctcttgaaaaaattcttctgagcctatctctcacgttcaatttccgtattttttccgtggtccaatcaaataatcattcttgtgtttttcatgtattttacaatcttccattcagaaatcatgtaattttactattcctctattttttaatcatacgatttaaagtaccttgaatgaatcctgaaccatgtaacgtgggtaaacaatttttttaccttgagtttcaactggcaagacttttgctagggcaaagattcgggtttggatttaaaaaaaggattcgggtttgattcacagcactgtttaccttacggttttctctgtgaatatacaagtaatagttgtccttttgtcgttcagctaactcctctttccatcacatgcttattacactttttttttgtactactacaatattccaagtccaaacagcacctccaaaggcgagtacatgaagattaaatatttaacaaaccgtagtatcctaagacgtggaaaatatattcaataatcatcctgacaatagactttggaaacatctaatgattctttctctgttccaactcttcatccaaacacactcctactagttgtacagtagttcagaaaaaccggaggaaagggagctaaaggcgtgtgctttgtgctgtttgttcacccggcaggtcaccagtggtcgctccccttcgccgcgcgcgccgtcgccgtcgcctcctccaggccgcagcagcagcagcagcagccaccgccgccggagaggaagggtggcggtggattcatggacgccggctccagatccagtggcggcgcgggcttcgacgacgacgacggccatgccgcgcgccgcgaggtctcctcctcgctgaaaggtggagtacctcaattctgcatttctgatgaatcagtttggtatacgcgcttttggagacattttggatgtggggggtggtgaaaatgaacgagtttttgtcgagatttttgtgttaattttgttttctttttttgggtttagagctcacggtcagggtggaagggaaaggtgggagctgcagcggcagcgctggcacggatcagatgccgaacacgccgcgctcgaagcactccgccaccgagcagcgcaggcgcagcaaaatcaacgacaggtgagtggagaatcggagtgctacttgtctagtttgataagctctcggttactaatctgtcgttgtatatgcgtaaaaggatcttttgtcgatctataaataaatttgtgtcaacagtttaagctgcattcaactgtttgcgctgctatttgctgggaaaatagtctgcatgaatccaatgttgtgaacttgtggtgccactagaaagtgctcatctttctgcaacataaatgccaattatctgaacctttgaggagttggtttgaggagaggctgtagcatttagggtagttcctaaggctaacagtggagacggtgctcatcttttctacagcaaagttgtccattgcctgagatgctggaagctgtaggtgtttggttaggctagaaagatgtgaatataatagatcgtggatatcctgttattacggagtttgagaataatgcgctggagtttggaatagttatgctcaaatagatgaactactgcactgtgaaatgcatcttagtttgggttttcagatttcttgccaaaaaaaaagcattgctgttgtgcatataattattgtttaaatggtccatctaaatttattttgcacgtccaattattttgcagatttcaacttcttagagacttattgcctcataatgatcaaaagagagacaaagcatcatttctcttagaggtaagaaagtttattgattgctttagttgtaatctgttttctatcgactatctttactatctctaacgatatttatttcaattcaggttattgaatacatacggtttttacaagagaaagtacaaaagtatgaggtttcatacccggagtggaaccaagaaaatgcaaaggttgtgccatggacaaacatctatttccgttcttcctggaaaaatgcgcaggtaagtttgctactaacaaatctttacatcttacttgtcgaggcttattatgaggtactaacaagacttcccttcatcacatgtttgctttgcagaacaaaggccaagttcctgcagatcattcacctgaccctccagaacttctgaaaaatggttccccctatatgttcccttttacagggaactctgataataacaatgcagttgaaactgcagctgcttcaggtgcacaggatcaggcagaaactgatccaatgagtcgtgtgtcttacagatcagtggacactcccagtcccaataatgttgcaggtacaatttctagtccaacctagctttataacttgcaggacttctgcactccttcattagagttagaaactctctcaagtttcaacctgtttgttaatgtgtagacaaagttacatctcagccacacgctcaactggtgagaccatcacctgcagagaatcacacagtaaactgcgacaagttaaataattctgaccttgccatcgatgagggaacaatcagtctatcaagccaatattcccaagagtatgtactaataacgtttttttctgtaaaaactgctttacccatctgtgtcaccattgtttacgcatttcttttttttctcttgtttccaattttgatatgcaacacctgacatgcatttttttccacgaattttttgatgaagttggattttgtttttttcgtccataacaggttgcttaacaagttgaatcatgccctggaaaactcgggtatagatttgtcccaagccagcatctccgtgcaaataaatcttggcaagagggctatgaagagatctactcctgctgcaacctccacttctaaggtaggatttatgtctcgtattgacactaagagccactacattatgtttgtggtaattgaaattggagctggcaatggatgttatacatggtttagttgttttacaatgttgacttcgttggttataacacaatttggacctccgaggcaattcttgggcagcatcagagcatttttacaatctgcacaatttaatcctttgacattgttatctgatatgctatttacgttataggagctcactgatccggcatctaatagtcaagcaatgggccgtcagcttaggttgggtgatggcgctgaagaacatcgacaagcctcaaagcgacacaaatcagataacagctgatggtttgctcctgaaaaccccagatattcaaccattttttgctcctaactgtgtacggggagccccaaggttttatgtatattaagtttacctgtgacgtctcgacaaaacaaggccttgatgtattctttcatttaatcacttcgccgttctagcccctagggaagaaaggaagcttccattgcagattgtgaagctgcttttgtccatatgcttccattcatatgagaagtttctcccaccctctgacagaatgtcttttgtaacataattcagaaatgagctatccaaagttccatc</dnaseqindica> 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