Os08g0525800
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os08g0525800 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001068829.2 GI:297608866 GeneID:4346092 |
| Length |
3562 bp |
| Definition |
Oryza sativa Japonica Group Os08g0525800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:26237622..26241183 |
| Sequence Coding Region |
26237622..26237634,26239699..26241025,26241108..26241183 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:26237622..26241183 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:26237622..26241183 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcttcttcctccctcgccgccgccgccgccgccgccttcctcctcgccgtcgccatgtcgtgccattgccatgtggcgcgagggtggggcggactcggcgtcaactacggcacggtcgccgacgacctccccacggcggcgcgctccgtcgagctcctccgcgcggcgggcgcgggggcggtgaggatctacgacgcgaacgcggacatcctgcgcgcgctcgccgggacgggcgtgccggtgtccgtcacggtgccgaacgacgccatcccgtcgctcgccgcggcggcgtcgcccgccgccgtggacgagtgggtggcgcgcaacctcgcgccgcacatcccggcggcgcgggtgctgtgcctgctcgtcgggaacgaggtgctctccgaccgcgccaccgcggggaccgcgtggcccagcctcgtgccggcgatggccaacctccgccgcgcgctctccgcgcgcggtctcggccgcgtcaaggtcgggacgacgctcgccatggacgcgctcggtacctcctacccgccgtccgccggcgcgttccgcgacgacatcgccggcgccgtcgtgcggccgctgctcgagttcctgaacgccacgggctcgtactacttcgtcgacgcctacccgtacttcgcctgggcggcgaaccaccgctccatctcgctggactacgccctgttccagggcgaggcgagcacccactacgtcgacccgggcacgggcctcacatacaccaacctgttcgaccaaatgctcgacgcggtcgtcgccgccatggcgaggctcgggtacgggaacgtgaagctggcggtctcggagaccgggtggccgaccgccggcgacgcggacgagctcggcgcgaacgtccacaacgccgccacctacaaccgcaacctcgccgcgcggatggccaagaaccccggcacgccggcgcggccgggagccgagataccggtgttcctcttctccctctacaacgagaaccgcaagccggggccgggcaccgagcggcactggggtctctactacccgaacgcgacgtgggtctacgaggtggacctcgccgggcggcggccggcggcgtcgtacccgccgctggcgcccacgccgccggcgccggaccaggacgggactcccgtgtggtgcgttcttgccggcggcggcggcgaggcggcgaacgagacggcggtggcggccgccgtggagtacgcgtgccggcagcggagcgggacgtgcgccgccatcgaggccggcggcgagtgcaaccagccggacacgctcgccgcgcacgcgagctacgcgttcaatgcgtattggcagctgttcaggaaagctggtggcacctgctacttcaacggccttgcagagaagaccaccatagatccaagtaaaaaagaggagtaa</cdnaseq> |
| Protein Sequence |
<aaseq>MSSSSLAAAAAAAFLLAVAMSCHCHVARGWGGLGVNYGTVADDL PTAARSVELLRAAGAGAVRIYDANADILRALAGTGVPVSVTVPNDAIPSLAAAASPAA VDEWVARNLAPHIPAARVLCLLVGNEVLSDRATAGTAWPSLVPAMANLRRALSARGLG RVKVGTTLAMDALGTSYPPSAGAFRDDIAGAVVRPLLEFLNATGSYYFVDAYPYFAWA ANHRSISLDYALFQGEASTHYVDPGTGLTYTNLFDQMLDAVVAAMARLGYGNVKLAVS ETGWPTAGDADELGANVHNAATYNRNLAARMAKNPGTPARPGAEIPVFLFSLYNENRK PGPGTERHWGLYYPNATWVYEVDLAGRRPAASYPPLAPTPPAPDQDGTPVWCVLAGGG GEAANETAVAAAVEYACRQRSGTCAAIEAGGECNQPDTLAAHASYAFNAYWQLFRKAG GTCYFNGLAEKTTIDPSKKEE</aaseq> |
| Gene Sequence |
<dnaseqindica>3550..3562#159..1485#1..76#atgtcttcttcctccctcgccgccgccgccgccgccgccttcctcctcgccgtcgccatgtcgtgccattgccatggtgatgatcacctcacctcgcgcctcgacgatttcatggcgttgagctaatgcctaatggcttctgttgctttgcattgcagtggcgcgagggtggggcggactcggcgtcaactacggcacggtcgccgacgacctccccacggcggcgcgctccgtcgagctcctccgcgcggcgggcgcgggggcggtgaggatctacgacgcgaacgcggacatcctgcgcgcgctcgccgggacgggcgtgccggtgtccgtcacggtgccgaacgacgccatcccgtcgctcgccgcggcggcgtcgcccgccgccgtggacgagtgggtggcgcgcaacctcgcgccgcacatcccggcggcgcgggtgctgtgcctgctcgtcgggaacgaggtgctctccgaccgcgccaccgcggggaccgcgtggcccagcctcgtgccggcgatggccaacctccgccgcgcgctctccgcgcgcggtctcggccgcgtcaaggtcgggacgacgctcgccatggacgcgctcggtacctcctacccgccgtccgccggcgcgttccgcgacgacatcgccggcgccgtcgtgcggccgctgctcgagttcctgaacgccacgggctcgtactacttcgtcgacgcctacccgtacttcgcctgggcggcgaaccaccgctccatctcgctggactacgccctgttccagggcgaggcgagcacccactacgtcgacccgggcacgggcctcacatacaccaacctgttcgaccaaatgctcgacgcggtcgtcgccgccatggcgaggctcgggtacgggaacgtgaagctggcggtctcggagaccgggtggccgaccgccggcgacgcggacgagctcggcgcgaacgtccacaacgccgccacctacaaccgcaacctcgccgcgcggatggccaagaaccccggcacgccggcgcggccgggagccgagataccggtgttcctcttctccctctacaacgagaaccgcaagccggggccgggcaccgagcggcactggggtctctactacccgaacgcgacgtgggtctacgaggtggacctcgccgggcggcggccggcggcgtcgtacccgccgctggcgcccacgccgccggcgccggaccaggacgggactcccgtgtggtgcgttcttgccggcggcggcggcgaggcggcgaacgagacggcggtggcggccgccgtggagtacgcgtgccggcagcggagcgggacgtgcgccgccatcgaggccggcggcgagtgcaaccagccggacacgctcgccgcgcacgcgagctacgcgttcaatgcgtattggcagctgttcaggaaagctggtggcacctgctacttcaacggccttgcagagaagaccaccatagatccaagtaagttactgctccctccgtttcttgttataaatcgttttgaatttttttagctaaactttttttaagttagatttgtataaaaaaatatagcagcatttcaaacataaagaaaatatattatcattatatattcaatgttacatttaatgatgctaattcggtgttttaaatgttgttaaaattttctataaaattcctcaaacataaagaagtttgactatgaaaaaagtcaaagttattaattatccatttgtgttattcaaaacaagcaaactaatctatagaaattggtgattgctatattgatattgtttgctgtttaagctaatcttcaagttggtgatttgctagttagattggcattactgttttagatttgtgctcattatggttagtcgatgaagtaggttaaattcggtgtttattagtgaggagaaggttttaatgtgttaatgccttctgcaaaacgtaaggaccaattgcagtatcataaaataaaaattatggatcttgaggctaagaaacaaatatagttgagcctccggtgcccatcactcttcactgggatgttggaagctggaatgagcacagctgcatcaatctaacagaatcatataattagtggctgttgctttcaactaatatatagatagctacatgtttattatcatgtactgtatattaatgccgtgccatccactgcttcatttcataaattcttgttggaatgtggccaacttgcaacctgcaaatgtatgcttgtatttttaattttgcaaagggcatgcccaaaaactaactatgatggatttccaattgatcgaaacggccaacagtctatcaattgattttagcattttagtttagttttagtgtgatccaatttgccttgcacattattcttgaaaccctgcctattcctaatttcctgtcagtggaaagtatctgctgcaaagctctgctaattaatgatttcaacgtctttccgccttcaatgagatcaatctaattgctggcgctcatgcattagtgcattagcttgttagataaaagtgaaaaaaaaaacgcgaacgttaggaaaggacctaatatcaaataattagaagaagtgatatcgtctagaccaccatcttatgaagctagctggaaaactcctgaacttttctgtgtctacccaacaacttacaatttatatgcatgtcagcctttgcactcagaagtaaacatgcaaaaccatttgttaacctgcaatgtgatcgcgcagttcctagcttggtggaattcagagtttcagctctaaactgtgctcagaagcaaaatgtatagaaattttatcttcagtctttcactcgtatgctcttatgtcattgtcaactatggtacgactagatctgctatttccatgaacaattttttgtcctctagagaaaagggaaaaaagaccggcaagatatattttttaagataatagaatataatatcccgacaagatatttatcttccgtttacatccttactggttaatgattggttgctaatgtagtaacaagggtgtgttttgcaggccatggatcttgcaagttcattagttctttggattagttatatgcaaaagaagattgacagagcacgatgactggattaggaggaatgaaggtcattgcctatatgacctcagattaattgttctacatgcctctgaagcaagcaaagaatcacctgtgattgatcagcttcaaattgatctcagtttttaaccaagtttttttataactttttttaaccaagttaaattttgtttcctcatctttctcctcaaaaagtaaaagaaaatgttagttcaaaacccaaaatgagtagctttaattatatgtcattcacttggattcaagttctgcttgtttggtagataccaggattacccttagacattgttcggttaatccccaagagaaaaagattagtgtgactgatggaaattaatgtggaattattcctctctaaattttgctcaatcctcttattgatgggattaaacaattctcctcaatcctcttataataagaaaagaggagtaa</dnaseqindica> |
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