Os08g0539300
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os08g0539300 |
|---|---|
| Description |
Zinc finger, RING-type domain containing protein |
| Version |
NM_001068911.1 GI:115477560 GeneID:4346180 |
| Length |
4717 bp |
| Definition |
Oryza sativa Japonica Group Os08g0539300, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:27036606..27041322 |
| Sequence Coding Region |
27036728..27036878,27037989..27038152,27038407..27038465,27039733..27039758,27039843..27040209 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:27036606..27041322 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:27036606..27041322 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggatctggagaggtcgccgccgccgccgccgcccgagggaggaggaggaggaggaggaggaggcgcgtcgtgctccatctgcctggatccggtggtggccgggggcaggtccgtcgccaggctgcaatgcgggcacgagttccacctagactgcattggatcggcatttaatgcaaaaggggccatgcaatgccctaattgtcggaagattgagaaaggccgctggctttacgcaagtgggcaccatccatctcctgatattgatataggtggctgggtgactggtgaaacctatgacatcacctcagatattccatttggttttcaatggtgcccctttagtggattcacccagctagcatctgtatttgaggagggtgaagctgaacaaacttcttatcatacagttggagatcattcaaatgctgctagcagttctcttgtttgcccttaccttgcactgcgtggttttctccatcctgtgcatgtcccttctagttctagttctggtgccgaaaacagttcatttcatcggcatccaactagcttggaaggccatgcagcccacgatttgagcaatacacaagttttccatgcaacagagtcaagaaatcatgacaatgaccaccgctatatgagcaatcttcctgtgtcaggcattcctgatcattctgtagctccatttggtataggattgccgagatatgacagcagcagccaacagagaacaaggccatatgcacatcaccgtcccctagttcacaggcccacacctcgcaacggaagcaatatggttacaccattagggtctgtgccagctgttatggctgagactagaggccatggtcatggtgcgaggggacacatgtatcaacagtcaatgcactcattgcagagcagcccattcccccctacatctagaagggttaggcctagggctttaacaattacatctttcatcgcagcatcatcctcagctgagattggaggacaccatggctttgctcctcctgtgaacaggagcaattcctcggatggtgaggctgtttctagacctgttgatcggccatatgggtggggccaggagggctttaccccatttccctggatcccagctgacggtgaatctcactggtggggcaccttcaatcccatgcagaaccatacacatggaggctttactcgaagacccaccggggagcgaatgccgcagagccacccagatagtggatatcattccatgcatcctcagaggatgccgccattcttgtaa</cdnaseq> |
| Protein Sequence |
<aaseq>MDLERSPPPPPPEGGGGGGGGGASCSICLDPVVAGGRSVARLQC GHEFHLDCIGSAFNAKGAMQCPNCRKIEKGRWLYASGHHPSPDIDIGGWVTGETYDIT SDIPFGFQWCPFSGFTQLASVFEEGEAEQTSYHTVGDHSNAASSSLVCPYLALRGFLH PVHVPSSSSSGAENSSFHRHPTSLEGHAAHDLSNTQVFHATESRNHDNDHRYMSNLPV SGIPDHSVAPFGIGLPRYDSSSQQRTRPYAHHRPLVHRPTPRNGSNMVTPLGSVPAVM AETRGHGHGARGHMYQQSMHSLQSSPFPPTSRRVRPRALTITSFIAASSSAEIGGHHG FAPPVNRSNSSDGEAVSRPVDRPYGWGQEGFTPFPWIPADGESHWWGTFNPMQNHTHG GFTRRPTGERMPQSHPDSGYHSMHPQRMPPFL</aaseq> |
| Gene Sequence |
<dnaseqindica>123..273#1384..1547#1802..1860#3128..3153#3238..3604#3928..4435#cccttccttccttcctttggacacacctccccatttccctccctctctcctcttccacgagctcacctctcctctcctctcctctcctctcccgcgagcgagcgagagagaggcaggcggtgatggatctggagaggtcgccgccgccgccgccgcccgagggaggaggaggaggaggaggaggaggcgcgtcgtgctccatctgcctggatccggtggtggccgggggcaggtccgtcgccaggctgcaatgcgggcacgagttccacctaggtcagattctcccccgctcccgctcccgcgctctccccgggcacgcacgtttctggaccggatctgtgggagaacgggcggggttggctcaattctcacggagggtggtttgacgtagatgcgaaatttgagtggttattagaatttttaattgtagctagggtgatcggtgtggttgaattcgcggagagctgcagatgtgatgtgtggagatggagtggaatgagaggaaaaaagaaaaagaaaaaccataaggattgcggcattagtcaatcggtaattttaattttaagcatggatttgacgcgaatttatgttggtttacttgttcgattccttgccgattgatgcgatttggcagcattggtgctgggtctattacctatagtggcatctcactttctgctcagccagatagtcacttacagaaacacacaaaagtagcgaatttgtagcggtaatacgagatattgttctagctgtaagcttttggtgcttgctgtttcgatttgatctatggcttctatgtgttatccatggagtgtatataaaaataaggcctctttagtttgctgaccgtgggctggacatcgcgtgcaatgctttcatatggtgcaagcaatgcttgtatatagggaatagagggactagaataagaaggcacatatagaattcgggcaccagattagaccttttcaagttccatggctaatctcttgcttttaccatataatgcaacgcatactaatgcattgttctagaatgagcctgatcatcttcgaactatggtaacaactacacaccatgcggtcatgcaaatgaatatgttatgctcatacaatgtagagaattgtttgaatttgttgccagctttaaacaaattcaactttttctggaagcatcatgtaatttatattttgtgaaaagccacttataacttattttgttttaaattgctgttgtgtagttttttttttcaaattctggcttgggatcgtttatgagccaagcatgtattcatagcctcatctgtgtacatcttcatgcatgtataaaaataaactttggcgcccttcacaggtggttaaactaacattttttccctgttagactgcattggatcggcatttaatgcaaaaggggccatgcaatgccctaattgtcggaagattgagaaaggccgctggctttacgcaagtgggcaccatccatctcctgatattgatataggtggctgggtgactggtgaaacctatgacatcacctcagatattgtaagtgttcagctgagagttaatatgcatatagggaaaaaaattggcatgccaattcctgttcaacctttgtaaataatgacatttcattactttgcatatcatatgctctggagctatttgtcttatgtcaatgagttgcatgcagccttgcatccaatttacccttgcaaaagacaggtttcagttttggtatgtagacaagtctgacatcatttcacctgtctcctgtttctaattattctgtttcacagccatttggttttcaatggtgcccctttagtggattcacccagctagcatctgtatttgagtaagcatgtctcttcttatctcaatatgtatgggtcattgtatatgcaattaatgatttacaagcaagagcaggtatttggtcatagtactaattttagtaagagaatattctgttttgtcgtatgtcatgttggtaattaatgttggtgttagttttttaaatagattatatggtactgccttcttgattgctgcactcgtgtcagtgagcactaaaataaaggccaatgccacaggatgagtttaactcatcttcctaaaacgaagaaacctaataacgtaaatagaaatgttggagacctggccatgataaacttttattattaaaatatgtaggtacgacttgattttgcattgatcataagtactccctccgtcccataatatagaaacctagtgctggatgggacgtatcctagtactacaaatctaaacacacctcctatccagattcatactactaggacgtcccattcattactaggtttctatattttgggtcagggcctcaggggtagtagttaccaagtcataaatagtaacctgtcaaaaaaaactaaacaggccattgatttgatgacaacctgcatggttgtaccctgcacaaaatgactactgcaccaacccttgggtcctcgatggtctcatgtctgaagtgtccagtgtgattgggtagagccaagaaggatttatggacttagttgccaagcgaactggcccatctcagtattttccatgatgcacaacccagtaaaggtgtttttctttcaatgcctgttttaccaccctccgaccttcctctttctgcttccatggtagccacctgccctgaacagctaaggatatttcctggttgtttggagccaacctggatccagctggccaagcatgccccgaagatggttctaccaatgctatacccaaagcaacaagaacaaccatttcactattcgtaaggcaactcagttgttattcaccaagcacttttttttaatggtcgtctagattttgttgtcagttattagattttggctcttgtttttttaatgaagtggcagcacaatatatatgtcaagatgtttgtcttgtccactgtatttgtgcatagccctggttagttgtaatttactggagttcctgtgttacaagatctatgttgtttgctctatgatggattggaatttggaacctcaggttcttctaaaagaattacgagtatattttaaaatttcaagttctgaatttagttgccactttatttgcagggagggtgaagctgaacaaacttcttgtaagcatgtctacttgaacttttaacatctttgatttcaattttcaatcttgttcattgcttttttgttttcctttcatgaagatcatacagttggagatcattcaaatgctgctagcagttctcttgtttgcccttaccttgcactgcgtggttttctccatcctgtgcatgtcccttctagttctagttctggtgccgaaaacagttcatttcatcggcatccaactagcttggaaggccatgcagcccacgatttgagcaatacacaagttttccatgcaacagagtcaagaaatcatgacaatgaccaccgctatatgagcaatcttcctgtgtcaggcattcctgatcattctgtagctccatttggtataggattgccgagatatgacagcagcagccaacagagaacaaggccatatgcacatcaccgtcccctagttcacaggtataagattatgggaacatcataaaacttgttatttctacattctagacagattcaacctattatgttcagaagtacagatgcttcagtacatagatagtgtagtgcctgatgaccaatgataacctaagtacttggctacttgcatatgttatttataagcactgtaaccagaattgttggtctgcctgatgatttccgtaggctatttctaaggataagaatatagctgatagcttggtaatgcaactcatggcaatttttctttaaggttttgccatcttaaccaccttgctgacctcttgtaatgtttaacactacaggcccacacctcgcaacggaagcaatatggttacaccattagggtctgtgccagctgttatggctgagactagaggccatggtcatggtgcgaggggacacatgtatcaacagtcaatgcactcattgcagagcagcccattcccccctacatctagaagggttaggcctagggctttaacaattacatctttcatcgcagcatcatcctcagctgagattggaggacaccatggctttgctcctcctgtgaacaggagcaattcctcggatggtgaggctgtttctagacctgttgatcggccatatgggtggggccaggagggctttaccccatttccctggatcccagctgacggtgaatctcactggtggggcaccttcaatcccatgcagaaccatacacatggaggctttactcgaagacccaccggggagcgaatgccgcagagccacccagatagtggatatcattccatgcatcctcagaggatgccgccattcttgtaaaggttatcttcctcgttgtttgtgtatatctcaaaattagttggaattatttgctccgagagaaaacgatgaatcagatgctattgtttccaaggaactaaatgatgctgcttctgttgtcggaatttagggttttctagctggcagccctaggtttgattaagggttgtgctttatcctatctcatttgttgcaatgggcagaaactatttggaaacataagcttaaactgtaccaagcagcgattgttgccattgaacatagttgtgatgccattgatgc</dnaseqindica> |
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