Os08g0546400
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os08g0546400 |
|---|---|
| Description |
UBA-like domain containing protein |
| Version |
NM_001068956.1 GI:115477650 GeneID:4346226 |
| Length |
5686 bp |
| Definition |
Oryza sativa Japonica Group Os08g0546400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:27453143..27458828 |
| Sequence Coding Region |
27453409..27453522,27454215..27454271,27454349..27454492,27455017..27455181,27455267..27455455 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:27453143..27458828 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:27453143..27458828 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggtgaggccgacgcaggacgcgatcgacaccttcgtcggcatcaccggcgccgatgaggccgtcgccgcccgcaagctcgaggaacatcatggtgacctaaatgaagctgtgaatgcctatttcaatgaaggagataggaccagcaccagagccaatgaaaatcctatacctaccggttatgatgacatggagttggatgaaccatttggtcctgttcctacatttcacatgcctttgggcaaccctttttcacttctggatcaaggttttttagaacgagctgctgctgtgtatggtgagggacctcatattacacaccctagggaggtgaggcggatagatgttgaagttaaggacaacaatactccagcaggtagttctggtcatggtcctgttattgaagatgttactggacatgagttttcacatgggccggaaattcgtgggactgttctgattgatgaagatgatgatgatgataacttgccatctgctcaagatactcgtctcccaagcaatccttcaacttcaaactattctgtaccaagagctcctccaattgctaatgttagtgactacaacaatgacatagaagaggagatggttcgcgctgcaatagaagcatcaaaaagggacgcagatggactgacaaatggtctaagaagtggagaacgtgaaaatgcatcacgtggcagagatgatgatgagattgctcgggcggtttctatgtccttggagacagcagaacaagagagagttctgcgccaagtgggagcgcatgtgtctgatcattctgatttatccgataaggaagacattgaaggagcaactgggacagtggaaaggcaagtaccaacttcagggaaagttggaacatctgatcagttggtagatgaagagaatttccaggatgatgacgttgaggaacattcttttgttagacaacactctaggcgtgtaccatctggaaatgatgagtccacagaagcacttgaaagggccaacagtcatccatccagtctcctccctcataacattgaaaacaatcagcagttcaatggagtttttccatcagagtggggtggcatttcttctgaagaacatgatgaagctgttatgcttgaagctgcaatgtttggtggaattcctggaagagcagcatatccattttctctcccgtatcatcaaaactcaagtcgctaccccacggttgctcatcctccgtcaccaacattaactgcacaacggttgttaagggagcagcaggacgatgagtatctagcatctctcgaagctgaccgagaaaaagaattgaaggcagagcaggaggctgagctccgcagattagaagctgctgctgaaagagaagctgctattgcaaagcaaaaacaagaggaggaagaaaagcgaagaaaacaactcgaggaagaggaattggagtccaagcttgcagccaaacaagcatcattgccaaaggagccattaccagatgatgtaggggccgtcactgttgtagttcgcatgcctgatggtcgtcgtcagggaaggcgctttatgaaatccgacaaccttcaggtcctttttgatttcatagatatctccaggactttcaaaccaggaacctataggctggtgaggtcttatcccaggcgtgcattcaccgactctgagtctcagatgtctttaagtgatcttggcctcaatagcaagcaggaagccttgtttctagagcagatttcaggatag</cdnaseq> |
| Protein Sequence |
<aaseq>MVRPTQDAIDTFVGITGADEAVAARKLEEHHGDLNEAVNAYFNE GDRTSTRANENPIPTGYDDMELDEPFGPVPTFHMPLGNPFSLLDQGFLERAAAVYGEG PHITHPREVRRIDVEVKDNNTPAGSSGHGPVIEDVTGHEFSHGPEIRGTVLIDEDDDD DNLPSAQDTRLPSNPSTSNYSVPRAPPIANVSDYNNDIEEEMVRAAIEASKRDADGLT NGLRSGERENASRGRDDDEIARAVSMSLETAEQERVLRQVGAHVSDHSDLSDKEDIEG ATGTVERQVPTSGKVGTSDQLVDEENFQDDDVEEHSFVRQHSRRVPSGNDESTEALER ANSHPSSLLPHNIENNQQFNGVFPSEWGGISSEEHDEAVMLEAAMFGGIPGRAAYPFS LPYHQNSSRYPTVAHPPSPTLTAQRLLREQQDDEYLASLEADREKELKAEQEAELRRL EAAAEREAAIAKQKQEEEEKRRKQLEEEELESKLAAKQASLPKEPLPDDVGAVTVVVR MPDGRRQGRRFMKSDNLQVLFDFIDISRTFKPGTYRLVRSYPRRAFTDSESQMSLSDL GLNSKQEALFLEQISG</aaseq> |
| Gene Sequence |
<dnaseqindica>5307..5420#4558..4614#4337..4480#3648..3812#3374..3562#3047..3278#2650..2756#2479..2562#1887..2397#1728..1789#126..209#gcgactcctcctcctcttctcgtcttgggtttctctccctcctcctcgccgtcgcgtcgccgcggaggcggaggcggagagccaaggccgcggcggtgcagccgccctcccctcctcccgccgccatggtgaggccgacgcaggacgcgatcgacaccttcgtcggcatcaccggcgccgatgaggccgtcgccgcccgcaagctcgaggtgacgcccacccgctccgttcccgtttgttccccccatcacccccccccttctcctcccttcaccgtcgccattctacgcctcggaatgtgtggggcttggatgcgtcgggtctcgagttaggtttgttgtgttagatggcgttgcgctgcggcgggggatgggtggtgcgggtgcgatgcgcgatttgcgggaggtgatgagaacgtggggggggggatggggttctagggtgtttagagttgagaacattttggggattggggattgtgtggtgcaatgccttcgaattttgagctttttagtgatgcatatgctcttagttttctcttcagcttgcgcggtcaggaatgctgaacacattagtggattagtttatgggcattgctatgggtacgattgtgaattgtcgattcacgcggtaggacatccaactttgtttatgttatggaactttgttgacacaatcctacttggagtaagagttggatggagtaattcctattttaatgtttttttagggaaatcctattataatgtcttggtcttccattttgtaggaagaccgctgttgtcactgaatggtttaataaatgtttgcagatctgctttctgtaattttattgaacattgatttatctatcgggcaagatggtctttattgatcaatagtctttgtgagaacaattttcagattatggtccattgagtttaagcatgagaaaattactttattcaatctttatgtggatttttgactagtacagcaaataagcattctgcttagtgaatatttggacaggttagttatattgttgttgttgcaataactcttgccaatcattggtctgtttggaaatgctctgttggagtgctgagtgaagtactgctttatacttgtttcttctggttgcagtaggaataacttagcatagtaccttctgcacctctgccgaagatgctgaatcagagtctgttgggccttagcctctttcttcttcaattatgagtttggaaagattgttatcttattttgttaggaatcatatatattaggatccttattacaactcctctttatataaaggaaatatcaggaagaaataatgcgagcaaagtattacgctacttcttctgcctctcttccactgcatttcttctgcctctcttccactgcatgcttctgcccttttccccgttacccttgagtactacttcttccgttctgaaatataagcatatctaggattcaaattctgtacacaatataaggattcctagaatacttgtcccattaatcacctttcattcaaattgtctccccatcttaccacaaccacccctcatttaatcaggacactatattcttctctcctcaaaacttaatctatgctaaacaacctagaactgcatatatttgggaatggagggggtacaacacacagaggcatacacaaagtccttacacaagtagatatttcaaaacgaatttctaactgactaaaatcattctaccaggaacatcatggtgacctaaatgaagctgtgaatgcctatttcaatgaaggagataggaccaggtacgtgttttttctcctagcggttcttatgtgcatttattgacctgataccatgttgttcccgttgttatatttaactgactcatacaattttcagcaccagagccaatgaaaatcctatacctaccggttatgatgacatggagttggatgaaccatttggtcctgttcctacatttcacatgcctttgggcaaccctttttcacttctggatcaaggttttttagaacgagctgctgctgtgtatggtgagggacctcatattacacaccctagggaggtgaggcggatagatgttgaagttaaggacaacaatactccagcaggtagttctggtcatggtcctgttattgaagatgttactggacatgagttttcacatgggccggaaattcgtgggactgttctgattgatgaagatgatgatgatgataacttgccatctgctcaagatactcgtctcccaagcaatccttcaacttcaaactattctgtaccaagagctcctccaattgctaatgttagtgactacaacaatgacatagaagaggagatggttcgcgctgcaatagaagcatcaaaaagggacgcagatggactgacaaatgtaagactgcttatcagatatctacttttaaaaatttggaacctacacatcttttttatcaaaacatttggtactatgcagggtctaagaagtggagaacgtgaaaatgcatcacgtggcagagatgatgatgagattgctcgggcggtttctatgtccttggaggtagttgttgaacacacaaagttctgtttttatgtgttctgttttttgtgtgttatgctgaattcatttttttttgtgactatttagacagcagaacaagagagagttctgcgccaagtgggagcgcatgtgtctgatcattctgatttatccgataaggaagacattgaaggagcaactgggacagtggaaaggtgtccatcaaatatattgtctaacaatctatgcatgtgtgatttttcattatatttggttattcatatatcaagttttattaggttcctagttactcaatgtccattgttccatgaatcttgagttctcttaatggtttcagcttcataaaagcaatgcattcttgcagctgcacctaccatattctttggatatcttttttgttattaagtttgttgtgattagctgagcatgagcttcttctatctagttgtgactgattcattgtacatattatttcttgttgtaggcaagtaccaacttcagggaaagttggaacatctgatcagttggtagatgaagagaatttccaggatgatgacgttgaggaacattcttttgttagacaacactctaggcgtgtaccatctggaaatgatgagtccacagaagcacttgaaagggccaacagtcatccatccagtctcctccctcataacattgaaaacaatcagcagttcaatggagtttttccatcagaggtggtattttaatccatcacacctgtaatgagatagaatttaaccatactacagcttcttcactgcttacaaacccgttaatttttgttgcaaagtggggtggcatttcttctgaagaacatgatgaagctgttatgcttgaagctgcaatgtttggtggaattcctggaagagcagcatatccattttctctcccgtatcatcaaaactcaagtcgctaccccacggttgctcatcctccgtcaccaacattaactgcacaacggttgttaagggagcagcaggtatagactttggagtagtatctatctgtgggataacataacaacggctgcatgcaagtatgttaacctggtgtttgaattgtaggacgatgagtatctagcatctctcgaagctgaccgagaaaaagaattgaaggcagagcaggaggctgagctccgcagattagaagctgctgctgaaagagaagctgctattgcaaagcaaaaacaagaggaggaagaaaagcgaagaaaacaactcgaggaagaggtaattgagttagtagttagcgcgtttgagagttgaatggatagtagtcatagaactgttcatacattagttatattggcatataaccatgctaatcatatcgttatggtttattaaattaaagtcatgccacactgttggcaggccagtgtgcttgatgaattttatcattagtgcagatacgattgcatgtcggtaacaatgtctggattgttgcaagttatattgctttacttgtttcttatctggaggacttctcagactaactaactccttaggtctgatgagaaacattcttctgtattcttctgtaaattatgtcattagtagtaagaaaaggtagttaaaagctagcactatgatctgactgtgaccatctttaccatctacgtaatatcaaataaatgataaggaagtaattatgtgtcctttagaacttgcctactatgccttttccatggtttgtgttattttcaccacacagtggtatattgattatgttatttatggcaatgtgagaataggaattggagtccaagcttgcagccaaacaagcatcattgccaaaggagccattaccagatgatgtaggggccgtcactgttgtagttcgcatgcctgatggtcgtcgtcagggaaggcgctttatgaaatccgacaaccttcaggtaacattcttttagttgccagaatacctaatgaaactcactggtattccctcaataaatttttggaattcttgcaggtcctttttgatttcatagatatctccaggactttcaaaccaggaacctataggctggtaactttgctaaccttttcatttttttcatggtgtttcaggaatgttctatacacagaaatcagtgtagtttaccattaacctgttgaaactggatttgcactagcacaagctggttatttacgccagcacaaaaagaaaaaaaaaacgatgattctgcctgcttttatgtcattatgtgtcagtttattttgctattagtgttatcaagtatcatgtaccattcctagaatagatcaatttctgaactatgtgattttaaaagatttaacatcaatactggaggttgtctgatagtcagcgtactcatcccgttgagctaggtcaggataatatgcctgtggcatggtagactgtaaagagattacattgaaaccgcagcaccagctattttttagcactcacacaacatttagtgggcatgctttttattttcattcctctgtttaggtccctaagatttaggatcttgtttgaatatcgtatacacaatgcattctagcttgttggttttgccatgttgtgatatttggattataaaaaaaaactagttacttaagtagcctgtaaacaggggaaaattaatgcatgggagatttcatgttgtttctgttttatagcatttttagatgttgctgattgaatcttgtggtcctgaatattaaatataaatgaaaatctacaatgtgcaggtgaggtcttatcccaggcgtgcattcaccgactctgagtctcagatgtctttaagtgatcttggcctcaatagcaagcaggaagccttgtttctagagcagatttcaggatagggggaaaccgggaaagagttaattgcaattaacacaacagggattcacagaatttttttttctttttacttatgcctggcacatgttcgtgaaaatattagcaaggttcgcatgaaacttggcgttaaggtctcatgaccctcttttgtgttttggaatggtgactctcaagtaccgggtttcatgtgatactcaccctgcatatttgaacagtcagaactcagaatgtacatagactgctgctttcagagctaccgcaattcatc</dnaseqindica> 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