Os08g0556400
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os08g0556400 |
|---|---|
| Description |
Zinc finger, DHHC-type domain containing protein |
| Version |
NM_001069010.1 GI:115477758 GeneID:4346287 |
| Length |
5205 bp |
| Definition |
Oryza sativa Japonica Group Os08g0556400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:27930434..27935638 |
| Sequence Coding Region |
27930567..27930611,27932100..27932213,27932309..27932704,27932858..27932926,27932998..27933069 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:27930434..27935638 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:27930434..27935638 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggtgcggaagaatgggtggcagctcccagcacacaccttccagattattgcaattaccgttttcttccttctggtggttgccttttatgccttctttgcaccattcctgggaaagcaagtccttgaatatatcgcattcggcatctatactcctgtggcatttgttgtcttcatcctttatatccggtgcactagcataaatcctgcagatcccgggatcatgtcaaagtttcaaaatggcttccgtaatgcaccaacaagtggcaccggcttacaggacacaaatttgccaggaaggggtgatgttgctactggaacgaattccccaacatctacttttaagagctctctagatggacgttctaaccatgctggtttagctgctggagatggaaataatttgagctcacaaccaccaaggagttcaagttgctccttagtcggaggacttatttgtgctctgtttgttgaggaggattgcaggacgcttgttgattcagagcatcaagctgatggagaagatgccttgttttgcacattatgtaatgctgaggttcgcaaattcagtaaacattgcagaagttgtgataaatgtgtggatggttttgatcatcactgtcggtggctaaataattgcgttgggcgcaagaactatttcacatttcttgctctgatgattaccagcctcctctggcttgccattgaaatcggggtcggcattgctgttcttgttgtatgcttcgtcaacaagaattcagaaagtattattcaagacaagcttgcaaatggtttaactcgtccaccctttgcaactatagtagccatatttactcttctttctataatcgcttgtatacccctaggtgaactcttcttcttccacatgatactgatcagaaaggggatcacaacttacgaatatgttgtcgcaatgagagctatgagtgaagcacctcaagaggaggaagaagaggatggggtgaacattgtttattccccaacaaattcagcaactactggattcagcggtggaagctcacttggtcttccctacaagggttcatggtgcacacctccaaggattttcgttgatcaggatgaagtgatcccacacctggaggctgggatggtgccatcaaccatcgaccctgacacggctggaaatgctgagagagcaaacagagccaagaagcaagtgaagatcagcgcgtggaagctcgccaagcttgacaccaacgaggccatgaaagcggcggcgagagctcgggcgtcctcctccgtcctccggccggtggacgctcgccaccgcggcggccacgacgccggcgacctgagctccagcggcaacggcagcgtcaggagcagcgtgagcgccgccgccaaggagcagaggaggagggcgtcctctctcccgagctcgtgcgcgcagagcgtggcgagccaggacgagtacgagcagagcggcagcagcgtgatgagcagcccggtgcgcctccacaagctcgcgccgccgccattgccggcggcgcacaacgtgccgcctcggccgccgccgccggtgaacgctgctccggaggcggcaatacctcggccgccgccgcctgttcctccggcgacgaggatatccaacccgatgttccagtcggccacgtcgtacgtccgggagaaccggagggcgtcggtcgtgtgggaccaggaggccggccggtacgtgtcggtggcgccggcgccggcaacggcgaggccaggaggaggcggcggtggcgccgagcagccggcggcgagggcgccgcctttcttggcgaacccaggtggcgagcgcgagccattgagtgccgcccgtagccgcaataatcccgccgcgcccgcgcccacgaacgccgccccttcgtcgtcgtcgacgctgccgtcggagaggctgacgtactccggccagtcgatattcttcggcgggccactgctgggcggcgccgccgccgccggcgaacctcgaagggacgaggcggcggggacgagggcccgcggcggcgagtccttcccggtgtttgctcccggaacattccagaagaagccgccaccgttccgtaggtga</cdnaseq> |
| Protein Sequence |
<aaseq>MVRKNGWQLPAHTFQIIAITVFFLLVVAFYAFFAPFLGKQVLEY IAFGIYTPVAFVVFILYIRCTSINPADPGIMSKFQNGFRNAPTSGTGLQDTNLPGRGD VATGTNSPTSTFKSSLDGRSNHAGLAAGDGNNLSSQPPRSSSCSLVGGLICALFVEED CRTLVDSEHQADGEDALFCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGRKN YFTFLALMITSLLWLAIEIGVGIAVLVVCFVNKNSESIIQDKLANGLTRPPFATIVAI FTLLSIIACIPLGELFFFHMILIRKGITTYEYVVAMRAMSEAPQEEEEEDGVNIVYSP TNSATTGFSGGSSLGLPYKGSWCTPPRIFVDQDEVIPHLEAGMVPSTIDPDTAGNAER ANRAKKQVKISAWKLAKLDTNEAMKAAARARASSSVLRPVDARHRGGHDAGDLSSSGN GSVRSSVSAAAKEQRRRASSLPSSCAQSVASQDEYEQSGSSVMSSPVRLHKLAPPPLP AAHNVPPRPPPPVNAAPEAAIPRPPPPVPPATRISNPMFQSATSYVRENRRASVVWDQ EAGRYVSVAPAPATARPGGGGGGAEQPAARAPPFLANPGGEREPLSAARSRNNPAAPA PTNAAPSSSSTLPSERLTYSGQSIFFGGPLLGGAAAAGEPRRDEAAGTRARGGESFPV FAPGTFQKKPPPFRR</aaseq> |
| Gene Sequence |
<dnaseqindica>134..178#1667..1780#1876..2271#2425..2493#2565..2636#2771..2896#2978..3058#3178..3372#3832..4827#ggtcttgattcttgaactgccctcaagaaagcaggggaaaggaaaggactcccctttccactgggagagagaaaaggagagagagacctggagaaggggggaaagggaggaggaagaagaggggagagaggccatggtgcggaagaatgggtggcagctcccagcacacaccttccaggtgcaatttctttcgatcagttcttcttcttcttgttgtttttccgtctatcttggcttcttgcggttgttatcgggcgcggtatccaccggaaattccgccggaagaattccttgtctttcaggcctgaagaacatctcgatcttcccgaactgaaagaaaattttcagcctttgtttgtttctctttttgtggatcagtttggcagaattcagttgctagtgatcttgcttatccactcccttatatctcaacttccactttacgtgtgtgtgtgtggattggaggagataaatgcgtgatgaaatgttgtagacttacgaagtagagttcagtttctagagtgcactgctcaggaatgatcactgtaattttcgctagtgtttttaggaatgcctggctctgaacctgtttaggctttgggcgaattctcctaggtagccttttttttttgttcctgattcctgcattttagtggagtggtttttagtcgtgcggtggatattcccttttgctactaactacaaaatctcatcttttggcatgatcctggttctaccatgatggagtgcggaattgttcaaaaaattaaataaataaacagagagatggagacatggagtgaaagattatgctctccatgacttggcactgaaatgggtgcaaaaagggacaaacttgtttgggttcacacatacagttttactaacaaaataaacaagtaagaacactggtagcttgagcttctgaagggatagcttggtgccttggtcatgtattgctgcttggcgacttattggacactccatggttattaaacaatgtgattttcatggactggtgaaattaagtagtaacttccaatcttccagttgctatcttccagttgcccttgtagcatcaataagattattgtttttctttcattatgctattactgaaaaattgaaaagtcagtttaagcatactaaggcagtgtttgagggagagaggattgggaagatacgcaaaacgaggtgagtcattagcgcatgattaattgagtattaactattttaaacttcaaaaatggattaatatgattttttaaagcaacttttctatagaaaatttttacaaaaaaacgcaccatttagtggtttgaaaagcgtatgcgcggaaaacgagtaacaacctcccctatctcctatgaacgaacgcagcctaaaatgctataagaggacaaagaactgtgaacttgccgtgttgtcctatgcctataataccctccaaaagcatttattgacagttcttcatataaaaagggtaatgcatatacatccaattgttgggacatttttttttaatttgatgtcaatcagcaaaaaatacgatttcgtattttctgttcacaacttttggttcatgatacacgctgtagtttgtaatacttgccgattaccggacttttgaacagtggatgactaagttgaatctcttgtcaaacagattattgcaattaccgttttcttccttctggtggttgccttttatgccttctttgcaccattcctgggaaagcaagtccttgaatatatcgcattcggcatctatactcctgtggtaagcctaccaaatgacacctgcagcatatcatgtgaggacagttatttgagatgtacacttactgtttctcctccacgtggtaaaattttcaggcatttgttgtcttcatcctttatatccggtgcactagcataaatcctgcagatcccgggatcatgtcaaagtttcaaaatggcttccgtaatgcaccaacaagtggcaccggcttacaggacacaaatttgccaggaaggggtgatgttgctactggaacgaattccccaacatctacttttaagagctctctagatggacgttctaaccatgctggtttagctgctggagatggaaataatttgagctcacaaccaccaaggagttcaagttgctccttagtcggaggacttatttgtgctctgtttgttgaggaggattgcaggacgcttgttgattcagagcatcaagctgatggagaagatgccttgttttgcacattatgtaatgctgaggtaagcttgtatatgtgctcaacgttggaactgcataatgatttttgtctcagtttcaggcaaaatatatcatttattttcctctgtaataactttgtaaaagcgaaaacttctgttgtcagatgttgctaattacaaaggcaaaattttcaggttcgcaaattcagtaaacattgcagaagttgtgataaatgtgtggatggttttgatcatcactgtcgggtattttcttatacaaacctatgtttgtcttcaaattttattcgcacgtctgatttttgcatccattgcagtggctaaataattgcgttgggcgcaagaactatttcacatttcttgctctgatgattaccagcctcctctgggtctgtaaagtggccttacttaatctctattccgaatacatgtttaacacagtactaaaagattctttgcatttttcattaattagttcagctgattggcattttaaatctattcttaatctgtgatctggcagcttgccattgaaatcggggtcggcattgctgttcttgttgtatgcttcgtcaacaagaattcagaaagtattattcaagacaagcttgcaaatggtttaactcgtccaccctttgcaactatagtagtaagttgcactagcagaaatcatcatactttagttgcaagacattttctctagttgactgaatgcaaacttcttgtgcaggccatatttactcttctttctataatcgcttgtatacccctaggtgaactcttcttcttccacatgatactgatcagaaaggtttgtatcgcaattctcaccgaatcaaatgtaatatctaaatgacatgtcagatgcatagaaatgtaatgtcatttgcttgaaattcccctacattgctttcatttgaactgaatcaggggatcacaacttacgaatatgttgtcgcaatgagagctatgagtgaagcacctcaagaggaggaagaagaggatggggtgaacattgtttattccccaacaaattcagcaactactggattcagcggtggaagctcacttggtcttccctacaagggttcatggtgcacacctccaaggattttcgttgatcaggtaactgcaaacgatgacccgtctcttctgagacaatctctcctgataaataaagaatcagatattgtatcatctgaatgaatatcagtatgaatcttcaagctgcaaatagcattacaaagaacatatttatctgaattcttgcaaacaacattgctaaataatctctccgttttaggttataagacgttttgactttgctaaaagtcaaactatttcaagtttgactaagtttatagatgaatacagtaatatttataatactaaattagtttcatcaaatcaataattgaatacatttccataataaattagtcttgggttgaaaatgttactaatttttttacaaactttatcaaacttaaaacagtttgactttgattaaagcaaagacgtcttctaaaatgaaacggagggagtagcgctgtactatttctcttctgaatgattgcaatgcaggatgaagtgatcccacacctggaggctgggatggtgccatcaaccatcgaccctgacacggctggaaatgctgagagagcaaacagagccaagaagcaagtgaagatcagcgcgtggaagctcgccaagcttgacaccaacgaggccatgaaagcggcggcgagagctcgggcgtcctcctccgtcctccggccggtggacgctcgccaccgcggcggccacgacgccggcgacctgagctccagcggcaacggcagcgtcaggagcagcgtgagcgccgccgccaaggagcagaggaggagggcgtcctctctcccgagctcgtgcgcgcagagcgtggcgagccaggacgagtacgagcagagcggcagcagcgtgatgagcagcccggtgcgcctccacaagctcgcgccgccgccattgccggcggcgcacaacgtgccgcctcggccgccgccgccggtgaacgctgctccggaggcggcaatacctcggccgccgccgcctgttcctccggcgacgaggatatccaacccgatgttccagtcggccacgtcgtacgtccgggagaaccggagggcgtcggtcgtgtgggaccaggaggccggccggtacgtgtcggtggcgccggcgccggcaacggcgaggccaggaggaggcggcggtggcgccgagcagccggcggcgagggcgccgcctttcttggcgaacccaggtggcgagcgcgagccattgagtgccgcccgtagccgcaataatcccgccgcgcccgcgcccacgaacgccgccccttcgtcgtcgtcgacgctgccgtcggagaggctgacgtactccggccagtcgatattcttcggcgggccactgctgggcggcgccgccgccgccggcgaacctcgaagggacgaggcggcggggacgagggcccgcggcggcgagtccttcccggtgtttgctcccggaacattccagaagaagccgccaccgttccgtaggtgaaatctgcaactgatgaccggcaatggcgatatcatcgccggacaatgctaatctccggcgaggtgacactggaagcagaatctgcaagaacaagtgatcagcatatgctgtcgaagcattaaaaggaaggaagattaattaatgtggagttttacatctgatgaagtgaagataattacataaccttgtctgattcaggaagagagagaaatcgggagcaaagagatgtggtgggagcaaagagttttgtcatgtacagcattcttttctcggtaattaattccgaacgaaatcatataaaactccgggagttagtatttgactgtgatttgtacaatagtaatgaataattaattgaattttggacgcaatacgctc</dnaseqindica> 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