Os08g0557100

From RiceWiki
Revision as of 20:54, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0557100

Description

Similar to Nucleic acid-binding protein precursor

Version

NM_001069016.2 GI:297608989 GeneID:4346294

Length

1918 bp

Definition

Oryza sativa Japonica Group Os08g0557100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27968272..27970189

Sequence Coding Region

27968592..27968654,27968796..27969077,27969409..27969510,27969649..27969738,27970121..27970168

Expression

GEO Profiles:Os08g0557100

Genome Context

<gbrowseImage1> name=NC_008401:27968272..27970189 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:27968272..27970189 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cttatcccctcctactcccccccctcatcctcctcctcctcgctcgccaaggtgtacgtcggtaacctgccgtacgacgtcgacagcgagggcctcgcccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttacaacagagagacagggcagagccgtggatttgggttcgttaccatgagtacgattgaggaagccgacaaggccattgagatgcttaaccgctatgatatcaacggaaggcttctgaacgtaaacagggcggctccaaggggctctcgtgtggagagacctccaaggcagtttgctcctgctttcagggcttatgttggcaacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgagcatggagaggtggttaacgcttcggttgtctacgatagagaatctgggcgttctcggggatttggttttgtttccatggcctccaaggaggagctcgatgatgctatttctgcccttgatggacaggaattggatggccgcccacttcgagtgaatgtggcagctgagcgaccacagcgaggcttttga</cdnaseq>

Protein Sequence

<aaseq>LIPSYSPPSSSSSSLAKVYVGNLPYDVDSEGLAQLFEQAGVVEV AEVIYNRETGQSRGFGFVTMSTIEEADKAIEMLNRYDINGRLLNVNRAAPRGSRVERP PRQFAPAFRAYVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMAS KEELDDAISALDGQELDGRPLRVNVAAERPQRGF</aaseq>

Gene Sequence

<dnaseqindica>1536..1598#1113..1394#680..781#452..541#22..69#aagctccaacagtagcgctagcttatcccctcctactcccccccctcatcctcctcctcctcgctcgcccatggccatggccaccacctccgtcacctcgctcgcgatggccatggccgcggccgcctccgccgacgccacccaggccccgcacaagctctccgccctccccttccaccacctcctcttctcccgcgcgccgcccctcctccgcgcctcccgccgcctccccctcgcgcccctcgtcgcctcctccgacgccgccgccgccgccgaggccggcgtcgaatggagcgagacggaggaggccgatgagggttcccaggaggaggaggaggaggaggtggtcgaggagcaggcggaggcggaggaggaggtggtggcctccgtggaggaggaggaggaggaagcggtggaggaggagttcgcggcggagccccccgaggaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagcgagggcctcgcccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggtgagcctactcgcgcgccagcccacaatcaatttcccccttcttctttttaacagaagaattgcaagatactattgccaattgcataaattctcaaggctcagtatttccaattacccaattattgtttttatttaggtcatttacaacagagagacagggcagagccgtggatttgggttcgttaccatgagtacgattgaggaagccgacaaggccattgagatgcttaaccgctatgtgagtgcatttctgaattgtcgtttcttaatccattgaagtattttattttcacaattttcaccattcgcacatgctgccgttacacataaaattggaagtaccttgataactgaaacaatttatattatctgatcaaagggtaaaattatactgttggtacatctcatttaggttaaccattgtgaaatgttcccatacccgatgaactgcgttcagtaaaactgagctcgaagatatttctgtcatagtgataaaatgatagtacagaagaaattgtataagttgcacagtgttctcagctgctggctgataaatttatgttttacaggatatcaacggaaggcttctgaacgtaaacagggcggctccaaggggctctcgtgtggagagacctccaaggcagtttgctcctgctttcagggcttatgttggcaacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgagcatggagaggtggttaacgcttcggttgtctacgatagagaatctgggcgttctcggggatttggttttgtttccatggcctccaaggaggagctcgatgatgctatttctgcccttgatggacaggtgaggacggcaccatctacattaagcatacacttgaatatcaccattataacgagtatggcaaatatggaggctctataagctaataccgtttcttttatgcttcttttattatgctcaattgttcatgatggattacaggaattggatggccgcccacttcgagtgaatgtggcagctgagcgaccacagcgaggcttttgattccatatggcgttggggagcatgtctgcacgtttgaacaagaatgctaaagtgttatgcgttaaggcggaagctgatggttgtcatttacagagcgcgcgttagcttcctgattttgagtcctcccgtcctttttatgtgtcttccaagctgatgttatgttaaattattctcaaaaatatgagttcaactttccaagtaggatatttataatgatgatgtccttagtattttttttccgtgataatccaaaagttcacttgtcgaccatatatctgagaaaaggagcaaatgcatggcagcagccagtgcttacccct</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0557100, RefSeq:Os08g0557100