Os08g0557900

From RiceWiki
Revision as of 20:54, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0557900

Description

Inosine/uridine-preferring nucleoside hydrolase domain containing protein

Version

NM_001069024.1 GI:115477786 GeneID:4346302

Length

3820 bp

Definition

Oryza sativa Japonica Group Os08g0557900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:28010853..28014672

Sequence Coding Region

28011257..28011365,28011503..28011638,28011728..28011835,28011922..28012018,28012113..28012217
,28012305..28012487,28013011..28013070,28013156..28013271,28014481..28014541

Expression

GEO Profiles:Os08g0557900

Genome Context

<gbrowseImage1> name=NC_008401:28010853..28014672 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:28010853..28014672 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtcgaacgagcagatccaccgggacaagctcatcatcgacacggatcccggcatcgatgatagcatgacaatccttatggcgttcagagctccaactgtggagatcatagggctcacaaccatatttggcaacaccaccacaaagaatgcgactcagaatgcgctcttgctgtgtgagagagcaggacatcctgaggttccagtagcagagggcagcgcagagcctctcaagggaggagagccacgtgttgctgactttgttcatgggtctgatggcctggggaatttgtttcttcctgcacccactagtaagaaggttgatgaaaatgctgctgagttcatggttaataaggtctctcaatttcctggagaagtttctatactcgcattgggacccctgacaaacgtggcgctggccatcaaaagggacccttcctttgcaagtaaggtgaagaaaatagttgtactgggtggtgctttctttgcggctggaaatgtcagcccagctgctgaagcaaatatatatggagatccagaagcagctgacatagtttttacctcaggagcagatgttgacgtggttggcattaacataacaactcaagtctgttttacagatgaggatctcctggagctaagaaactcaaaagggaagcatgcacagttcttatgtgacatgtgccagttctatagagactggcatgccgaatccgatggctttcatggaattttcctccatgatcctgtgagcttcactgccctagttcaccctgagtacttcacgttcaagaagggtgttgtgagagtagaaacccagggcatttgcactggtcacactttaatggaccaaggattgaaaaagtggaattcagagaatccatggtctggctacaagccaatctcagttgcatggacagttgatgtgccaaatgttctcgcattcgtgaaggaactcctcatggctccatga</cdnaseq>

Protein Sequence

<aaseq>MGSNEQIHRDKLIIDTDPGIDDSMTILMAFRAPTVEIIGLTTIF GNTTTKNATQNALLLCERAGHPEVPVAEGSAEPLKGGEPRVADFVHGSDGLGNLFLPA PTSKKVDENAAEFMVNKVSQFPGEVSILALGPLTNVALAIKRDPSFASKVKKIVVLGG AFFAAGNVSPAAEANIYGDPEAADIVFTSGADVDVVGINITTQVCFTDEDLLELRNSK GKHAQFLCDMCQFYRDWHAESDGFHGIFLHDPVSFTALVHPEYFTFKKGVVRVETQGI CTGHTLMDQGLKKWNSENPWSGYKPISVAWTVDVPNVLAFVKELLMAP</aaseq>

Gene Sequence

<dnaseqindica>3308..3416#3035..3170#2838..2945#2655..2751#2456..2560#2186..2368#1603..1662#1402..1517#132..192#gggagagtagtagaggttgcgtcctactgctacttcttcctcctcgatcttcctctacttgaggagagagagagagagagagagagagagagagagagagagagagagagttagttttgggtggatttgtgatggggtcgaacgagcagatccaccgggacaagctcatcatcgacacggatcccggcatcggtgagtcccttcctcttcctcttcctcatctcattgcgctcatactagtttcttcctgatttgatttcaattcttgtgtggaaacatctcctctcccaacgacaacaatggagtcatggggatagaaacgagaggccatagatagatagatagatggataagatgaggagagcgaaaaaatttcaatctctttttggtatcttcccctcctgatcccctcctcctcacctcacctactcctccaagaaaggagaagagaggaaggacaaccaactgaaactctctctcacaccactcatgtggtgtggtggggttcctccttctcaatccgccgtttggacggatccccactatccggccttgtccatgaaaacgatggatggatcctgcatgcacaagcaccaaaaagttgcaatcctttagggaaaagttgcaatctttttttcttttcttttttttttttggcttaagcgactggtttgtggttttgtgcttagcgatgcgctagaaactggtaaattgaagagctgctgctgatagttcatgactattgtcgtaattatatcttattagcatcttcagtctaatggtaaagcacctagttagtgccaggactgtgtgctaatgcggccgacaagtgtcaacactacgccatgattcctctcaagtctcacctaggtgtcgttcgtgggggccacctcttcatactttaactacagtgaagaaccgttttgtttcctgatttttgcctagttgatggttaaaaaagagcagctttacgagtgtgtgtgtgtcacactttcaacattttagtgtaaattgagaagttacagattcccctttcacatacattcaccttttcctgatcgtgcaatagaaatgcatgacatctgatgcttgtgctagccaattccaattgaccttcttatgttcaaattctaaatgttctatttaaattggacgcaaaacaattcaaggttaaaagagagatagtttcactcctgttgcaaaactacatccacttcttgagagagagagagaccgatacggcacaaatactagacagataatttgaagaagattttgttgtgaatctattgcctcaaactatgtgctttctgatttctatgtcttcagaaaatacatctgaatttcaaccttctaggaaactacttcttgctaattcttttccttacaaactggttccagatgatagcatgacaatccttatggcgttcagagctccaactgtggagatcatagggctcacaaccatatttggcaacaccaccacaaagaatgcgactcagaatgcgctcttgctggtgagatttgagatggttgaatatcctttgttatgtttcttgctcttggcctcttgttaacagcggcatgtattgaaaatgacagtgtgagagagcaggacatcctgaggttccagtagcagagggcagcgcagagcctctcaaggtacgctggttcacgatatgcttatacagttatatgtaacaatgtaagacttagcgtgtacgacgagcaacatgaatcttgatacatgttctcccgcacaaaccgatcttcatggctgctttcaaatttgatggcttttccttcgtttatgcttgcttacattgtcaaatatcaattttaaatggctcttgagtgctgacttgattagcgtcaatcataaatgtgtagctaatgtgacatcttaaaaataagacgaaacagtcttcctagtttattggatgtacagggcacaaccttcttttttttttgcccgtgggagttaaggcttaatataatattcatttttctatttataatatagattgaacagtttacttttatttgcataagcatcaacattttatatgccaccgattcaattaagaccgcagacttccgatcatactacatttcctattcaattccagtcaacgccccatgcttatctggatgagcttgttaatgatgtgctcttgtactttagggaggagagccacgtgttgctgactttgttcatgggtctgatggcctggggaatttgtttcttcctgcacccactagtaagaaggttgatgaaaatgctgctgagttcatggttaataaggtctctcaatttcctggagaagtttctatactcgcattgggacccctgacaaacgtggcgctggtatgcttccatttacaggataaacctgtttagcatgttgctttatatgccgtgacagaggataagtctgtctgtgttctttcttaggccatcaaaagggacccttcctttgcaagtaaggtgaagaaaatagttgtactgggtggtgctttctttgcggctggaaatgtcagcccagctgctgaagcaaatgtaatgtcattattgcatattagactagtgcttgtacatggacagaaaaaatacattgacacaagtattaagttttcgctgcataactctgcagatatatggagatccagaagcagctgacatagtttttacctcaggagcagatgttgacgtggttggcattaacataacaactcaagtctgttttacaggtttgttccttgatagtgtcatttgcatggttcgagtccagctgtggggtcaattatattcatcaagtaaaatctgtttctttcagatgaggatctcctggagctaagaaactcaaaagggaagcatgcacagttcttatgtgacatgtgccagttctatagagactggcatgccgaatccgatggctttcatggtatatcgaaatcctctcgttttggtattattctgctagttaccattcaaactgaaatatactttagctgattatttctatgtgttcaggaattttcctccatgatcctgtgagcttcactgccctagttcaccctgagtacttcacgttcaagaagggtgttgtgagagtagaaacccagggcatttgcactggtcacactttaatggaccaaggattgaaaaagtatgatattgtacttatttctaagttaatcacaacatatttacctttctagcgtcatgacattttgacaagcacatctatcactgatatatggctactgtaattgttactgattgcttgttccaactatgacgcaggtggaattcagagaatccatggtctggctacaagccaatctcagttgcatggacagttgatgtgccaaatgttctcgcattcgtgaaggaactcctcatggctccatgagcgattttacgcctatttcttgtgcttttggatacacaagcaaatttgacaaatacagagttgtgattagatcctggaaaccggaagctttctattcccctatgaataagaagatatggttgttttgatttcttgagttcaagtctggtggctcaaaacaacctggttccacctaagaacagaataaggactggtttgttctgggctagtaggcatcagacctgaggaccaaaacaatctgttatcttattatatgtaataggaggattagaagtttgcttcctagctacaagcaaaatatatgtagtaaattgaaattctgcatacgaaagacagcattattacaaactgtttcagacatttgtgccacagatatacatttcaaattcggaaatcagtttgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0557900, RefSeq:Os08g0557900