Os09g0135400

From RiceWiki
Revision as of 20:55, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0135400

Description

Octicosapeptide/Phox/Bem1p domain containing protein

Version

NM_001069173.1 GI:115478085 GeneID:4346468

Length

2491 bp

Definition

Oryza sativa Japonica Group Os09g0135400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:2632508..2634998

Sequence Coding Region

2633236..2634870

Expression

GEO Profiles:Os09g0135400

Genome Context

<gbrowseImage1> name=NC_008402:2632508..2634998 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:2632508..2634998 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcaaaatttaatccgtcgccaccatcgcccaagttggtgcctttctccaactctccgccatcttctgccaacgcatcagctgctgagagctcccagaaggtcacgccgacacctctggttccctcttcactttcgttgaaagacaaagcgctgatggacaagaaggttgtcacaagatcaaggccgctcaagctggtgtacgatcatgatataaggcttgcgcagatgccagaaaaatgcagcttccgaacactccgtgaagttgtggcatcacgattcccatcgtccaaggctgtgctgattaagtataaggatgctgatggtgatctggttaccattacttgttccgcagaacttcgattggccgagtcctgtgttgatatagctggcagtgaggtgatagaagatggtgcacggcatggtcagaaacttccaatgttgagacttcacattgttgaagtaagcccagatcaggagcctccaatgccaacagaagaggagaagctggagcaggataatgagttgctggtgaaaggtgaagataactctccacatgcttcagcagctgtggtgactgatgcagaggtgacgaaacaagatgtggagaatgtagttgctgaagctgaacagaacaccctgacagggaagaaagattgtggccatgctgagtgcaaggaagctgaaattgatgattggcttcttcagttcgcagatttattccggaaccaggttggtgttgatgcagatgcacatctggacctgcatgaactgggaatggagctgtgctctgaggcgcttgaggaaacggttacaagtgaggaggcacaagccctctttgagatggctgcagctaaattccaagaggttgctgctttggccctattcaactggggaaatgtgcacatgtgtgccgcaaggaaacgcattcccctagatgaatcggctccaaagaaagtcatgtcagctcagctctgcacagcttatgattgggtgcgagataggtatgctcttgcagggagcaagtacgaggaggctcttaaaatcaagccggacttttatgaagggctacttgctttaggccagcaacattttgagactgcaaagcttcattggtcatttgcactagcagacaaggttgacctgtctgcttgggattcttcacagacattcaagctttttgacagtgctgagcacaagatgagggctgcaacagaaatgtgggagaaagtagaagagcaaagaatggcagaattaaaagaaccatctagcgaggcactgaagaaaaggaagaagcaacataatgcagatggtcaaggggagttgactccagaggaggcagctgagcaggcagcagtaatgaggcagcaaattcacctgttctggggtaatatgctttttgagcgttctcaagtggaattcaaacttgatatcgctgattggaagaagaatcttgatgcgtccattgaaaggtttaagttggctggagcgtcagaatcagatatctctgcagtcttgaagaaccatttttccaacacagtttctgagtgtgaagataagaaaatcatgactttagatacaggaatctcccaaataagtaacaatattgaggacaagtgtatccttgaaagctag</cdnaseq>

Protein Sequence

<aaseq>MSKFNPSPPSPKLVPFSNSPPSSANASAAESSQKVTPTPLVPSS LSLKDKALMDKKVVTRSRPLKLVYDHDIRLAQMPEKCSFRTLREVVASRFPSSKAVLI KYKDADGDLVTITCSAELRLAESCVDIAGSEVIEDGARHGQKLPMLRLHIVEVSPDQE PPMPTEEEKLEQDNELLVKGEDNSPHASAAVVTDAEVTKQDVENVVAEAEQNTLTGKK DCGHAECKEAEIDDWLLQFADLFRNQVGVDADAHLDLHELGMELCSEALEETVTSEEA QALFEMAAAKFQEVAALALFNWGNVHMCAARKRIPLDESAPKKVMSAQLCTAYDWVRD RYALAGSKYEEALKIKPDFYEGLLALGQQHFETAKLHWSFALADKVDLSAWDSSQTFK LFDSAEHKMRAATEMWEKVEEQRMAELKEPSSEALKKRKKQHNADGQGELTPEEAAEQ AAVMRQQIHLFWGNMLFERSQVEFKLDIADWKKNLDASIERFKLAGASESDISAVLKN HFSNTVSECEDKKIMTLDTGISQISNNIEDKCILES</aaseq>

Gene Sequence

<dnaseqindica>729..2363#tgggcaaatccggcgcaaaaaagaagaaacccgccgccgccgcctccgcctccgccgccgccaccaaatcatctcccgccgcaacagagccgaaggcaccgacgcagtcccagccccccgcggccaacggggcggcgccgcatctggtggaccccgccgtgctcctgcgccgcgcgcacgagctcaaggaggaaggcaaccgcctgttccagtcccgcgactacggcggcgcgctgcggcagtacgagctcgctctccgcctcgccccgcgcggccaccccgaccgcgccgtcttccacagcaaccgcgccgcctgcctcctccagctccgccccgtcgaccacaaggccgtcgccgaggagtgctccctcgctctccaggcggagccgctcttcccgcgcgcgctccttcgccgcgcccgcgcgctcgaggcgctcggtcgccacgagctcgcgcttaccgacgcccttgccctcctcgctctcgaccccgaccaccaggacgccgtcgacctcgtccaccgcctccgctcccgcattctatccccgtcctcctcagcctcaggctctgccacctccacccccgaaccaactagccgcccctcccctgctgctcttggtgcctccgctgttgttgccggcctaggcccgtccctccccgctcgccctttccccaagaaaccatcacctcctcctccgcctgctcaacaacagcaatcggttcctccaatgtcaaaatttaatccgtcgccaccatcgcccaagttggtgcctttctccaactctccgccatcttctgccaacgcatcagctgctgagagctcccagaaggtcacgccgacacctctggttccctcttcactttcgttgaaagacaaagcgctgatggacaagaaggttgtcacaagatcaaggccgctcaagctggtgtacgatcatgatataaggcttgcgcagatgccagaaaaatgcagcttccgaacactccgtgaagttgtggcatcacgattcccatcgtccaaggctgtgctgattaagtataaggatgctgatggtgatctggttaccattacttgttccgcagaacttcgattggccgagtcctgtgttgatatagctggcagtgaggtgatagaagatggtgcacggcatggtcagaaacttccaatgttgagacttcacattgttgaagtaagcccagatcaggagcctccaatgccaacagaagaggagaagctggagcaggataatgagttgctggtgaaaggtgaagataactctccacatgcttcagcagctgtggtgactgatgcagaggtgacgaaacaagatgtggagaatgtagttgctgaagctgaacagaacaccctgacagggaagaaagattgtggccatgctgagtgcaaggaagctgaaattgatgattggcttcttcagttcgcagatttattccggaaccaggttggtgttgatgcagatgcacatctggacctgcatgaactgggaatggagctgtgctctgaggcgcttgaggaaacggttacaagtgaggaggcacaagccctctttgagatggctgcagctaaattccaagaggttgctgctttggccctattcaactggggaaatgtgcacatgtgtgccgcaaggaaacgcattcccctagatgaatcggctccaaagaaagtcatgtcagctcagctctgcacagcttatgattgggtgcgagataggtatgctcttgcagggagcaagtacgaggaggctcttaaaatcaagccggacttttatgaagggctacttgctttaggccagcaacattttgagactgcaaagcttcattggtcatttgcactagcagacaaggttgacctgtctgcttgggattcttcacagacattcaagctttttgacagtgctgagcacaagatgagggctgcaacagaaatgtgggagaaagtagaagagcaaagaatggcagaattaaaagaaccatctagcgaggcactgaagaaaaggaagaagcaacataatgcagatggtcaaggggagttgactccagaggaggcagctgagcaggcagcagtaatgaggcagcaaattcacctgttctggggtaatatgctttttgagcgttctcaagtggaattcaaacttgatatcgctgattggaagaagaatcttgatgcgtccattgaaaggtttaagttggctggagcgtcagaatcagatatctctgcagtcttgaagaaccatttttccaacacagtttctgagtgtgaagataagaaaatcatgactttagatacaggaatctcccaaataagtaacaatattgaggacaagtgtatccttgaaagctaggttttcatggttttaagttggataacatccatgcccatattcttatctgttcttgataatattttcctgatgttgttttatgacctcctaattagggattacagcacaatgaattttccgttacctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0135400, RefSeq:Os09g0135400