Os09g0266600

From RiceWiki
Revision as of 20:56, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0266600

Description

NPH3 domain containing protein

Version

NM_001069255.1 GI:115478249 GeneID:4346563

Length

2470 bp

Definition

Oryza sativa Japonica Group Os09g0266600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:5587461..5589930

Sequence Coding Region

5587790..5588218,5588302..5589051,5589859..5589930

Expression

GEO Profiles:Os09g0266600

Genome Context

<gbrowseImage1> name=NC_008402:5587461..5589930 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:5587461..5589930 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tggtccgagagccgcatcgtccagccctgcgtcgacgccatcgtcgagaagatcctcacgcccccctccaaggttacgtggtcgtacacctacacgaggcctgggtacgcaaagaaggcccaccagtcagtgcccaaggactggtggacggaggacgtgtcggagctggacatcgacgtcttccgctccctcctctccaccgtctgcgccgcccgcctcctcccgccgccgctcatcggcgaggccctccacgtctacgcctgcaagcacctgcctgacccgctcaaccacgccgccgccgccgccaccgccaacggccagagctctgagctggagacggcggcggcgaagcagcgtcgcgtgctggagaccatcgtcaccatgatccccggcgacgccggcgcggtcaccggccgcttcctgctccggctgctccgcgtggcgagctacgtcggcgcgtcgccgtcgacgcgcgcgcagctggtccggcaggccggggcgcagctcgacgaggcgagggcggtggacctgctcgtcccgatgccgtcgtcgtcggacccgccggcgtacgacgtcggcgccgcggaggccgtgctcgagcacttcctggcgctgttccagcggccggcgccgcccgacgagcggcggcggatgagcgccgccatggagaaggtggccaggacgttcgacgagtacctccgcgccgtcgcgctccacgccgacttccccgtcggcaagttcgtcgacctcgccgagtgcttgccggacatcgcccgcaacgaccacgacggcctctaccacgccattgacacctatctcaaggagcacccggagctgagcaaggcggacaagaagcggctatgccggatgatcgactgccggaagctgtcgccggacgtgcgggcgcaggcgatctccaacgaccggatgccgctgcgcaccatcgtgcagctgctcttcgtcgagcaggagagggccatgggcggcggcggcgcaagcggcagcaacagcgccgtcgcgcccgacgccatcgcaatgctcgccgcaagaaaggagaaggaggacgagccgccggcgccggccgctgaccacaagtcggacgtgcaccggccacgcggcgaccacggcgaacgcgcccgggcggacggcgcggcgatgacgaggtcgctctcggcgtccaccaccaagacggccggcgctgccgcgccgaggacggcggagagtagggggagcaggatgaggaacaagtaa</cdnaseq>

Protein Sequence

<aaseq>WSESRIVQPCVDAIVEKILTPPSKVTWSYTYTRPGYAKKAHQSV PKDWWTEDVSELDIDVFRSLLSTVCAARLLPPPLIGEALHVYACKHLPDPLNHAAAAA TANGQSSELETAAAKQRRVLETIVTMIPGDAGAVTGRFLLRLLRVASYVGASPSTRAQ LVRQAGAQLDEARAVDLLVPMPSSSDPPAYDVGAAEAVLEHFLALFQRPAPPDERRRM SAAMEKVARTFDEYLRAVALHADFPVGKFVDLAECLPDIARNDHDGLYHAIDTYLKEH PELSKADKKRLCRMIDCRKLSPDVRAQAISNDRMPLRTIVQLLFVEQERAMGGGGASG SNSAVAPDAIAMLAARKEKEDEPPAPAADHKSDVHRPRGDHGERARADGAAMTRSLSA STTKTAGAAAPRTAESRGSRMRNK</aaseq>

Gene Sequence

<dnaseqindica>1713..2141#880..1629#1..72#tggtccgagagccgcatcgtccagccctgcgtcgacgccatcgtcgagaagatcctcacgcccccctccaaggtagatgctttgtccttcgcgccaaattttgattttgaaagccatttgaagttttttttttcccgtttctttcttgattttggcgcggaaacggttgatgaccgcagattatagatgaatacaagtgaaatttacacaaattttgccaaaaattaaaattcatttggctttttaaacaccatgaaattttaaaataaaacgttgtcatacattttaaaacctaaaaccatgtaaccatcaagccggttttgtgcattgtagagaaagtagtgatgtggcaatggcgacaaattcactacaccaaccactttctagtaatatgtttctatattgtaccaatcacgctcatataaataaggatatagtataattatgattaggaaataaaacattagattcgatagttatgtacgctgcgcgctaaggtagaagtaaataaggatatagtataagtatgattaggaaataaaacattagattcgatagttatgtacgctgcgcgctaaggtagaagtaaataaggatatagtataagtatgattaggaaataaaacattagattcgatagttatgtacgctgcgcgctaagatagaagacaggaggaggatgattccacttttatatagtaataacagagaaaagtataaataacagtttattagatcgtttttaaatacaaatcgagcctgacctaattcgtagcagccgaacccagttttatttcttttgagatatgaaccgaatttagctcgtatttgacgaaatttctgtgaaaaattcataaatgagcgtaaatatttgtgcaggttacgtggtcgtacacctacacgaggcctgggtacgcaaagaaggcccaccagtcagtgcccaaggactggtggacggaggacgtgtcggagctggacatcgacgtcttccgctccctcctctccaccgtctgcgccgcccgcctcctcccgccgccgctcatcggcgaggccctccacgtctacgcctgcaagcacctgcctgacccgctcaaccacgccgccgccgccgccaccgccaacggccagagctctgagctggagacggcggcggcgaagcagcgtcgcgtgctggagaccatcgtcaccatgatccccggcgacgccggcgcggtcaccggccgcttcctgctccggctgctccgcgtggcgagctacgtcggcgcgtcgccgtcgacgcgcgcgcagctggtccggcaggccggggcgcagctcgacgaggcgagggcggtggacctgctcgtcccgatgccgtcgtcgtcggacccgccggcgtacgacgtcggcgccgcggaggccgtgctcgagcacttcctggcgctgttccagcggccggcgccgcccgacgagcggcggcggatgagcgccgccatggagaaggtggccaggacgttcgacgagtacctccgcgccgtcgcgctccacgccgacttccccgtcggcaagttcgtcgacctcgccgagtgcttgccggacatcgcccgcaacgaccacgacggcctctaccacgccattgacacctatctcaaggtcacagaatcaatcacaccgtcaaaataccagctaaattaattgatcattcgagctgataagatcaacaatggcgtatgcaggagcacccggagctgagcaaggcggacaagaagcggctatgccggatgatcgactgccggaagctgtcgccggacgtgcgggcgcaggcgatctccaacgaccggatgccgctgcgcaccatcgtgcagctgctcttcgtcgagcaggagagggccatgggcggcggcggcgcaagcggcagcaacagcgccgtcgcgcccgacgccatcgcaatgctcgccgcaagaaaggagaaggaggacgagccgccggcgccggccgctgaccacaagtcggacgtgcaccggccacgcggcgaccacggcgaacgcgcccgggcggacggcgcggcgatgacgaggtcgctctcggcgtccaccaccaagacggccggcgctgccgcgccgaggacggcggagagtagggggagcaggatgaggaacaagtaaatcaatggtggtcgcccatgaatggatgacattcttgtttcttctgatcccttgcttgaaatttgttgatacttgtgattcttgatttttttttcttttggtattctttttctattttcttcttcattttgatttcagtgcatcccatttttggtgggagatgtgagggccatattgttgaaagagggaagagaatgaggggtagattttgtaattaaatggatgggggataataagaggctataatcatacgacctagcatagctcaccaatcaagaaaaatgtccatcttcatcattcattccacatatgtatctactgttaccttc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0266600, RefSeq:Os09g0266600