Os09g0296800

From RiceWiki
Revision as of 20:56, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0296800

Description

Chlorophyll A-B binding protein family protein

Version

NM_001069336.1 GI:115478411 GeneID:4346649

Length

2922 bp

Definition

Oryza sativa Japonica Group Os09g0296800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:7750930..7753851

Sequence Coding Region

7750931..7751226,7751314..7751460,7752479..7752611,7753015..7753107,7753321..7753617

Expression

GEO Profiles:Os09g0296800

Genome Context

<gbrowseImage1> name=NC_008402:7750930..7753851 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:7750930..7753851 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctccaccactcctcctgcgcctccgctcacccgcgccacccgccgccgtcgccgccgggtccctctcccggcggcggcggcggcgcagggccggcctcgcgccggtgcgagcgtcgtggcaggagcttgcgggggtgctggtgttctccgccgtgcccttcacggccgtcaaggccctcgccaacagccccctcggcgcccgcctccgccgccgcctcgacgaccggaaggccgccgccgccgccgaggccgacgccctccgctccgccgcgcgccaagcccgcaccgccagctcgtggtatggggatgaacggccgcggtggctaggccccgtgccgtacgagtacccggcgcatctcaccggagagtaccctggcgattacgggttcgatattgcaggcctgggcagggatcccgttgctttcgcaaactacttcaactttgagatcttgcattgtcggtgggccatgcttgctgctcttggtgttgttgttcctgaactgttagatctttttggagtagtccattttgtcgagcctgtttggtggaaagttggttacgcaaaacttcagggtgacactcttgattaccttggaattcctggtttccgaatcgctggtggtcagggtgtcattgtcatcgctatctgtcaagcccttttgatggttggtccagaatatgcaaggtactgcgggattgaggctctagaacccttgggattatatcttccgggagacataaactacccgggaggagcactcttcgatcccttggggctctccaaagatccagtcgcgttcgaagatctaaaggtgaaggagatcaagaacggtcgcctggcaatggttgcatggctcggcttctacatccaggcagctgtaactggcaagggtcctattcagaaccttgttgaacacttgtcggacccgctgcataacaacattttgtcctcttttgtttga</cdnaseq>

Protein Sequence

<aaseq>MPPPLLLRLRSPAPPAAVAAGSLSRRRRRRRAGLAPVRASWQEL AGVLVFSAVPFTAVKALANSPLGARLRRRLDDRKAAAAAEADALRSAARQARTASSWY GDERPRWLGPVPYEYPAHLTGEYPGDYGFDIAGLGRDPVAFANYFNFEILHCRWAMLA ALGVVVPELLDLFGVVHFVEPVWWKVGYAKLQGDTLDYLGIPGFRIAGGQGVIVIAIC QALLMVGPEYARYCGIEALEPLGLYLPGDINYPGGALFDPLGLSKDPVAFEDLKVKEI KNGRLAMVAWLGFYIQAAVTGKGPIQNLVEHLSDPLHNNILSSFV</aaseq>

Gene Sequence

<dnaseqindica>2..297#385..531#1550..1682#2086..2178#2392..2688#aatgcctccaccactcctcctgcgcctccgctcacccgcgccacccgccgccgtcgccgccgggtccctctcccggcggcggcggcggcgcagggccggcctcgcgccggtgcgagcgtcgtggcaggagcttgcgggggtgctggtgttctccgccgtgcccttcacggccgtcaaggccctcgccaacagccccctcggcgcccgcctccgccgccgcctcgacgaccggaaggccgccgccgccgccgaggccgacgccctccgctccgccgcgcgccaagcccgcaccgccaggtagtacaactacactcgcagagattaccggccttgcatcagctagctataagctcaagctgctaaacatttcgattgcttttgaagctcgtggtatggggatgaacggccgcggtggctaggccccgtgccgtacgagtacccggcgcatctcaccggagagtaccctggcgattacgggttcgatattgcaggcctgggcagggatcccgttgctttcgcaaactacttcaagtatgtcactgttgcaattttctgatccatttacatttgagaatttatattactttgcaaataaaaaaagatagtagaagagtactggttagggcctgatggcagcttgcaaattgcaactatctagtttgtctgctccacattgtattcggtcctaaatgctaagtaatcaggtgtgcaccttcctgttcactgttctttctgattatgtgtttgtatatttccttccaggaagtaaaatgtactcaattgttaaatgccaacaattgtcacgcttcctttagtactgcaaaatagctttccatgcaccaatcctggtttatttttaacgtgtacaaagaactcgttgtctacaagattgtttgatagctttgcgtgaggttgctcatgcagatgtacaatatacaaataaaacttgtttgttttatgtagaagctagatcattttttaaaaaaattataaaaacatgtttcacatgatttaatttttatacactcatgtctttgtgctccactttgctcctcatactttagactaaaatagttgcataaaaatatgctatctgtgtctttgagtttcattttccccgaggatcttctatgttagaatagagactcgtactgttgaatgtacatagaatgcatctgttcaataatggataaggttctgtttttggtgacgtccatgcctctttttcagggttaagctgctccagtgcgtatatagcttataatagtaaatcatttcctttgtgtaccagaaactggtattgacaggctggaccacctacgtgataattggggtactaggactattgaaagtggcaatattattatgccttctaaattgtaacagtgagttaactgaatcaagtctttttgtaatgttgtttgcagtagctcctgtaaacccaaagtttcttgtgacatcgtgatctgaacttctcttgttgtagcttgtgtctttcttcctattcacaatttcaactcctcattttcactgatgatcttgcctgcagctttgagatcttgcattgtcggtgggccatgcttgctgctcttggtgttgttgttcctgaactgttagatctttttggagtagtccattttgtcgagcctgtttggtggaaagttggttacgcaaaacttcaggtaagtttcagtgttgtactactcaaatatccatgcctcagttcatttagcacacaattgaccgtcagatcaaaacaaaccatcagatcagtgctaattgcatgtctaatagcccatccttatagattgcaccccttccatctagactagcaatataggactaaacatcccaccaattgttctcacttgccatgcatgtggacctttcagactttttttgttggaatttctgtttgttcctttgacatacagttcagcttggaaacaaactagatatgtaactcttgctgccagtgaacagatttgcatgctctaccaacaaaaatggcgagctggataaggaaattgattatttcttagttgtgttaatttgtttcattcaaccaatgagttaattttacagggtgacactcttgattaccttggaattcctggtttccgaatcgctggtggtcagggtgtcattgtcatcgctatctgtcaagcccttttgatggtaacataaagttttttttttcttttaatcatgtactttctttttctcttccttgtgtacttcttcaaacactttggagttgtcaacagtcacctcacgtatattcatcagtattgtaggattattctgctgttacatcattctcttgttagttctttgtttccaattattcagcgcatttgataacggttttttcaccccatgacttgttaggttggtccagaatatgcaaggtactgcgggattgaggctctagaacccttgggattatatcttccgggagacataaactacccgggaggagcactcttcgatcccttggggctctccaaagatccagtcgcgttcgaagatctaaaggtgaaggagatcaagaacggtcgcctggcaatggttgcatggctcggcttctacatccaggcagctgtaactggcaagggtcctattcagaaccttgttgaacacttgtcggacccgctgcataacaacattttgtcctcttttgtttgagccttcttttaatggacatagcagctgtgtcctgtttggtcacatgaacagtaggacttatgtgcagctagcgtttatatttactggttttgaacactagttagctatttacacatgtaaatatgtaacactggataagaagatttatgtggggtttgtaaatggcatgtcttcaaacaaagtttacacgccgcaagaaatcggccacattgtcaataagactaaattgattcc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0296800, RefSeq:Os09g0296800