Os09g0297100

From RiceWiki
Revision as of 20:56, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0297100

Description

Similar to CROC-1-like protein (Fragment)

Version

NM_001069339.1 GI:115478417 GeneID:4346652

Length

2988 bp

Definition

Oryza sativa Japonica Group Os09g0297100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:7770869..7773856

Sequence Coding Region

7771197..7771337,7771432..7771557,7771968..7772107,7773761..7773800

Expression

GEO Profiles:Os09g0297100

Genome Context

<gbrowseImage1> name=NC_008402:7770869..7773856 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:7770869..7773856 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgctggggagctccggcgccggatcgagcgtcgtcgttccgcgaaacttcaggttgctagaagagcttgaacgtggtgaaaagggcattggagatggaaccgtgagctatggaatggatgatgcagatgacatctacatgcggtcttggactggcaccatcattggtccacataatagtgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaaggactacccagagaagccaccatctgtccggtttcattcaagaatcaatatgtcgtgtgttaatcatgagactggagcggttgactcgaggaagtttggtgttctagcaaactggcagcgcgagtacaccatggagactatccttacccagctcaagaaggagatggcaaccccgcagaatcgcaagttggtgcaacctccagaagggacgttcttctag</cdnaseq>

Protein Sequence

<aaseq>MTLGSSGAGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDAD DIYMRSWTGTIIGPHNSVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMSCVNHETGA VDSRKFGVLANWQREYTMETILTQLKKEMATPQNRKLVQPPEGTFF</aaseq>

Gene Sequence

<dnaseqindica>2520..2660#2300..2425#1750..1889#57..96#ctcgtcaatccccaaaccctcctcctcctctccggcgatccacccatcgatcggcgatgacgctggggagctccggcgccggatcgagcgtcgtcggtgagcgatcgatcgaatccccccttcccttcttcccttcccccccttttctcgcgagtgcctagggccttcggatcggaggaggctgaggaggagaatccacgcgggtttcgctccgttccgcgcctcgtaactttggcgctgtgtcccgccatggctgtgctgtgctcgatgtggttggtgatcaggcgagacgccgacgcgttggtttgtttgttggaattagcgatctgcggtttttgtaccatatgggttccatccatctggtgatttagcttggtttgcatgcgtgcagcggtcatgggatctctctagatggcctggtttgctcggtttgcgaatttatttacggcatgttgatgatggtttggctttggcagtaaatttgtggtatccttagaggatgaaattgttccctttgctaacaagtggtcctttagctgcttgggtgttacaaggggagagctgagaagtgcctgggaccattagctctaagtggactatgaggcataattatcagcgggattattagttgtatcacttgactttaagtggaaatgtttttaatgaagatagatatgctcttctgatcatggtttccttagatagctgttgtataggcctcatcgcggctggatgagactgtgttggtttctttttgctggatctgttttttcgtgtgggcatgcaggttgtgtgctttataaaaacctgggtattgaatgctatattgcgtttttcttgcagtgttaagttcggtcttctcttaatattttctttcctagatggaattaaatagcttttagcgtctccggtttggaggtttgaacgtaatgcctttttgtgttctaatcacaagttggaactttgcaccattcaaacaattgtactgaaattgtttcacctcggcggccttgtgattcagactacttgccaaagatcatgttatttgttcattatattccactgatgaactttgtgtgtgaagttacactatttctgtctactattctgttttgagataatacattgtataatcaatctcaagtcaaagttcaggcttcaatctgagaagtcaaaaccatgattgcccgttttagagccactgcactctgagtgtctgtgcactagataaaacaatgacttgcgtttaacaaatgccgacatatctgttctgggtgtatggtattcgagtcacaagattcttcatcgtcttgcaaacagaacaatacatttttttttttttgcattgttgttaaccccccacgccaatggcagatatattcaattttgttttgcttcacaagaaaacaacagctgagctgcagtgctcttgtccctcattcgggagaatgatacattggtgttattctttttttttcttcagaaaatagtaatcatctacaaatccactaaattctgaaactgggaatcgatattgccattttatttatctcggttgtagccgtctttgctctgtaattcagtacttgatgcatgggtatgaaaacttctcatgctgtttctaggttgattttgtcttcttttgttctgtgcaatgatatcaccattatgcaatttctatataagtagatttaagagggtaactgcattatatcctgaggagttgactaatatgtaaaatgcctgcagttccgcgaaacttcaggttgctagaagagcttgaacgtggtgaaaagggcattggagatggaaccgtgagctatggaatggatgatgcagatgacatctacatgcggtcttggactggcaccatcattggtccacataatgtgagattatggactctatcctgatacactcacaatatatcatattactcatatggaaaatcttctcctgtggctttatatctttaccgtcgtactgtgcttcatcttgggtttttattagtggagaagatgtctttattagtggaaaaaggctatttgaatggcattaagatatgtgtgacaaggttatggaattatatttctgggaagaggcacacttgagcttttcaacttccttatgttgaccataaaggcaggagaatcactactacaagctaaaacttacatatattagctctagatgctttctcatgtttgacagtttgagagtccacctagctcctcttgtactgcttatataaaatattattaacttttactaagtgtctgtttcttcctcaatctggcagagtgtccatgaaggtcgcatctaccagctgaagctgttctgtgacaaggactacccagagaagccaccatctgtccggtttcattcaagaatcaatatgtcgtgtgttaatcatgagactggagcggtattctctcctcccaaatgtagatgccaagtttatttattttgtgcaggctactccctctgattgatattcatttggtgctgtgatcctataggttgactcgaggaagtttggtgttctagcaaactggcagcgcgagtacaccatggagactatccttacccagctcaagaaggagatggcaaccccgcagaatcgcaagttggtgcaacctccagaagggacgttcttctagaggagtatttacctcctggctcatctccagaattcagattcaacatcatcaacttgtatttatctggctcccgcgcttaattgttttctagttcaatttgatatatgccctgctttctgtgtaccaacaaccgagtccaactttgcgcctcgtgattcgtcgggtggctgttgattaaggagatgagtcggatgaaaagggtgatctggtttggcaaaattggcagtatgagggatgtaaaattggaaacagatgctgtgtcaagaaatgtgtaactgcaggtcctttatattgcctacatgaatatagtccgtgcatgcttttcttt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0297100, RefSeq:Os09g0297100