Os09g0309700

From RiceWiki
Revision as of 20:56, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0309700

Description

Similar to Transcriptional factor TINY

Version

NM_001069370.1 GI:115478479 GeneID:4346686

Length

3337 bp

Definition

Oryza sativa Japonica Group Os09g0309700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:8765726..8769062

Sequence Coding Region

8766038..8766994

Expression

GEO Profiles:Os09g0309700

Genome Context

<gbrowseImage1> name=NC_008402:8765726..8769062 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:8765726..8769062 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggtgccctcttcacggaaagtccgtgttttctgctctgatcctgatgccactgactcctctgatgaagatgaccagaataagaaggaaaggagattttcaagggaaatactaattccaatggaaaactccaaggcatccaaacctgttaagacccttgttcaatgtggcacaaagactgtaaaggattccgagaaggaaccgacgagcaaatacaggggtgtgcgccggcgggcgtggggcaaatgggctgcagaaatacgtgaccctgtgcgaaaatcaaggaaatggattggcacatttaacagtgaggaggaggccgctgcggcatatcttgcacaatcaaaccagttccatgaagagttgatggccttgaaaatccaatcttctgtatcagagcaggaagatttgtcaagctctgttactatatcctgcgtgtcctcatctcagtcatgtgaccagaagattcaggcaaagccacaagaacacaagagagtgtcagtggtggttaaccgtgagaccgttgagcagaagtttaaggcacagccacaagctcagaagattaaggcacagccagaagtgcagaagagagtgtcagtgaagattagccatgagactgaggatgagcacttgctgaacttgccgtccacgcctaaaggcaaagagatttcgatgggcgctgttcttggcaggatagatgagattcctgtgagcaactgtgtgggccatattgatgaatttccacctgatgatttcactaggcttgcagatgcgttcccagttagtgattttatcggcatggcagatgtgccactgggcgatgattacattggccttgcagacatcagccacctgccgctgcctatcacagatctgaagttcgacctcaatgcagaactcaactgggacgggttcgactttgcttcattggaacaagaactcaactgtctttga</cdnaseq>

Protein Sequence

<aaseq>MMVPSSRKVRVFCSDPDATDSSDEDDQNKKERRFSREILIPMEN SKASKPVKTLVQCGTKTVKDSEKEPTSKYRGVRRRAWGKWAAEIRDPVRKSRKWIGTF NSEEEAAAAYLAQSNQFHEELMALKIQSSVSEQEDLSSSVTISCVSSSQSCDQKIQAK PQEHKRVSVVVNRETVEQKFKAQPQAQKIKAQPEVQKRVSVKISHETEDEHLLNLPST PKGKEISMGAVLGRIDEIPVSNCVGHIDEFPPDDFTRLADAFPVSDFIGMADVPLGDD YIGLADISHLPLPITDLKFDLNAELNWDGFDFASLEQELNCL</aaseq>

Gene Sequence

<dnaseqindica>2069..3025#acacatcacacgtttcgcctccctcctccgctcgtcttcttcattctctctccttcgcttcgcttccaaatcgcccgcaatttctcccccaaaaacctcccctccccccaccaccaccattaataaacccctcctcctcctcctcttcttcctcctccgcctcgccatctcaccgccaccgcctcctcactcactcacttcctgccacgtcattcgcgccatcgatcgcgtcgtcgcctcagctgcctgtaagtggtgaggtgacgacctctgctgtctcctttcttgttctttgttcttcctccaatatcggatcgtctcgggttggggttggggttggctcggcgtggatcggtgtgttgttgttggtggcgacgtgtttcttcttcctcgttgaaagattggatttttttttttgggttggtattattgcggagatatttcgtgggtgggttcggtttgtttctatcttttttttttcttttttacctttccttttttttgtgggggtttgtggggggattttttctgggggttgtgattaatcagctgccaatctaatctggggggattgtgctgggtgtgaatacttgaattttggatggaaagttcttggattcttagctttcgcgtcctctgtttcctttcttgatctcctcttttttttcttttctttttctttttactttccttgatgatgaattcgaattcgcttgtgatgttgatcgatccgcttgtggtgatgatgctgggaggagcagagaggaagaggaggagtagagctcgtcgtctccgccgccgcagctggtgctcgctgttgatttatgtcgcctgctctacccccgtttctccatggttctgagctccagtcgccgccaacggtttcttcctgctcccttctcatcctcctccttcaaaattggtatacgaggggcgcaagaacacagcaaaatcccttcacgatctccaggtaacccatgcatttctctgtttggtttaatccgattcgtttgaattgaaaccaatattgtccattatctcggtaaataaagtcagtcgtgtgtgcatgttgttgtttctctatttctttctaggacagcatatattatatgtactaatatgtttattaagattgtcttccttgcatgatggaagattgttttttcagttgctagttgcatatctagaggagggcatggtgggtggatatattattcttttaattcaatgagtatatatgactgcataactgtgttaagaatgttgatgcaagtttggactggttacccagctgagctgcttaataaggattgatttgttgatcttgtcatagtcataacgtttcactatttttagatgcaaagatggatacgcttgcttgatcattctttgctctaataatgaccaatgtgccttctttgcttgttggtttcagatttggatttggggtgaaatactttggctttcttcatttagactggtgacaattgaagatagcccccaaattgccttaagatttggtaagtgttggctgtttttaaggcaatatattatcagcaaataactgctcttccgtattataactttcctagtttatttgtactacttaaagagaaccttttcaagactaacttacagggcatcatcacaaaacctctttttcctttttattctttcaggtttggcttgagtggatcaagtacagaatccgaacttttgcaacctgacattcttctagttcacaaagtcggccagatttgagatttctctcggacatctctgtacacacaggagctctcttttgctccagttttaaacagaagttggacaaaggctctgtttctggttttttgagtttctgcgataagcttagagagcagacaacaaacttttgtcctgattcatctaaactcttacctggtaggtgaacatcttttctgttttgcttctttgcaatttcatatccttttatgagcatatttgacacatcctcagccttctctgcagactgcaatcaaggccaattgtaatccaataatctctgatcttgttctggttgcacgttgagatgatggtgccctcttcacggaaagtccgtgttttctgctctgatcctgatgccactgactcctctgatgaagatgaccagaataagaaggaaaggagattttcaagggaaatactaattccaatggaaaactccaaggcatccaaacctgttaagacccttgttcaatgtggcacaaagactgtaaaggattccgagaaggaaccgacgagcaaatacaggggtgtgcgccggcgggcgtggggcaaatgggctgcagaaatacgtgaccctgtgcgaaaatcaaggaaatggattggcacatttaacagtgaggaggaggccgctgcggcatatcttgcacaatcaaaccagttccatgaagagttgatggccttgaaaatccaatcttctgtatcagagcaggaagatttgtcaagctctgttactatatcctgcgtgtcctcatctcagtcatgtgaccagaagattcaggcaaagccacaagaacacaagagagtgtcagtggtggttaaccgtgagaccgttgagcagaagtttaaggcacagccacaagctcagaagattaaggcacagccagaagtgcagaagagagtgtcagtgaagattagccatgagactgaggatgagcacttgctgaacttgccgtccacgcctaaaggcaaagagatttcgatgggcgctgttcttggcaggatagatgagattcctgtgagcaactgtgtgggccatattgatgaatttccacctgatgatttcactaggcttgcagatgcgttcccagttagtgattttatcggcatggcagatgtgccactgggcgatgattacattggccttgcagacatcagccacctgccgctgcctatcacagatctgaagttcgacctcaatgcagaactcaactgggacgggttcgactttgcttcattggaacaagaactcaactgtctttgatggcttgaatcctgttctatgtgaaaacctcttgttgattgaattgagtgcaggaggtagattcaggtatccatctttcacattgctggcaggccgagtgtatgatctggagattttcatctccaattttgccggaaaattgtacagtccccctacagcaaacaaatgagtaccgcagtatttatgtatatgttcaccaatctcaaaaatgttaatgagattgtggtgacagaccgtccttgatctcagtttggttgtgtatttgttggacgccattattatatttgttaattttgatattgttcttgtgat</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0309700, RefSeq:Os09g0309700