Os09g0401300

From RiceWiki
Revision as of 20:58, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0401300

Description

ZIM domain containing protein

Version

NM_001069656.1 GI:115479054 GeneID:4347000

Length

4187 bp

Definition

Oryza sativa Japonica Group Os09g0401300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14709841..14714027

Sequence Coding Region

14710214..14710409,14711866..14711923,14712033..14712393,14712491..14712575,14712682..14712953
,14713074..14713276,14713781..14713856

Expression

GEO Profiles:Os09g0401300

Genome Context

<gbrowseImage1> name=NC_008402:14709841..14714027 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:14709841..14714027 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagagggacttcctgggcgcgatcgggaaggacgaggagcagcggaggcatgcggaggagaggaaggaatcagattactttggagcaggaggaggagcggcagcggcggcgatggattggtcgttcgcgagcagggccgcgttgatgtcgttcaggtcgtcgtcgtcggcggcggcggcggcggcgagggaggagacgagggagctcgcgttcccacacttctcggcgttagacggcgccaagatgcagcaggcctcgcacgtcctcgcaagacagaaatcgtttggtgccgagagccacggcatcccgcagtacgccgccgccgccgccgtgcacggcgctcaccgtggccagccaccgcatgttctgaatggggctagagtgattccggcctcgtcgccgttcaacccgaacaatccgatgttcagggttcagagctcgcccaacctcccgaatgccgtcggcgccggtggtggcgcgttcaagcagccgcctttcgccatgggcaatgcggttgccggatctacggtcggtgtgtacggaacaagggacatgccgaaggcgaaggcggcgcaattgaccatcttttatgctggttctgtaaatgtattcaacaacgtctcgccggagaaggctcaggaactcatgttcttagctagcagaggatctcttccaagtgcgccgactaccgttgctcgtatgccagaggcacatgtctttcccccagcaaaagtcactgtacctgaggtttcgcctacaaaaccgatgatgcttcagaaaccgcagcttgtttcgtctcccgtgccagccatttccaaacctatctccgttgtgtcacaagctacaagtcttccacggagtgcctcaagctctaatgtcgactccaacgtgacaaaatcttctggtccattggttgttcctcccacaagtttgcctcctccggcccagcctgagacactagccactaccactgctgcagctattatgccgagagctgtccctcaagcgcggaaggcatcccttgcccgattcttggagaagcgaaaggaaagagtgacgaccgtggcgccatacccattggccaagagcccgctagagagcagcgacacaatggggagtgccaatgacaacaagtcatcttgcacggacattgccctctcaagcaaccgcgacgaatcattgtcattaggccagccaaggaccatcagcttctgcgaggagtcccccagtacaaagctacaaatctga</cdnaseq>

Protein Sequence

<aaseq>MERDFLGAIGKDEEQRRHAEERKESDYFGAGGGAAAAAMDWSFA SRAALMSFRSSSSAAAAAAREETRELAFPHFSALDGAKMQQASHVLARQKSFGAESHG IPQYAAAAAVHGAHRGQPPHVLNGARVIPASSPFNPNNPMFRVQSSPNLPNAVGAGGG AFKQPPFAMGNAVAGSTVGVYGTRDMPKAKAAQLTIFYAGSVNVFNNVSPEKAQELMF LASRGSLPSAPTTVARMPEAHVFPPAKVTVPEVSPTKPMMLQKPQLVSSPVPAISKPI SVVSQATSLPRSASSSNVDSNVTKSSGPLVVPPTSLPPPAQPETLATTTAAAIMPRAV PQARKASLARFLEKRKERVTTVAPYPLAKSPLESSDTMGSANDNKSSCTDIALSSNRD ESLSLGQPRTISFCEESPSTKLQI</aaseq>

Gene Sequence

<dnaseqindica>3619..3814#2105..2162#1635..1995#1453..1537#1075..1346#752..954#172..247#gtagtagtagaagaagcgtagagcggtcaaggctgcgtcgtcgtcgtcgtcgtcgtcaccggcagcggaggaggaggaggaggagagaaggttcagaggaggaggaggtagcgaggcacgaagtagcagcatctcatctcatctctccctggctggctggggggaaattcgatggagagggacttcctgggcgcgatcgggaaggacgaggagcagcggaggcatgcggaggagaggaaggaatcaggttagcttttctcgcgggaattcgctcgccttccctgtttcggggcgatttggcgcgccgcggcgggggggaatcttgaggaggggtgggtgagttcggcgagctaactgctggatgtggccatggccgccatggctcgtgaggcggagaagaaaagcgacatcctcctcttccatggattttgtgttggattttcttttctttgtttttcttttggggggaaaggaaaggtggtcgcgtttggtatggcggcctaattgctttcgatggctcactttgccgtgtacgctcgattcggggcgaagaaattcagcgaggatttctctccgggggagaaagccggccgaatctttctgccgctcgcgcgtgtcgctagtcgatttcgagtagtcgctgcttctgaaacgattgggatgcttaacggattcttggttgattgtgtcatatatatagagctgggcggatgagtattcgattgagtgtgtgtgcgtgcgcaattttcagattactttggagcaggaggaggagcggcagcggcggcgatggattggtcgttcgcgagcagggccgcgttgatgtcgttcaggtcgtcgtcgtcggcggcggcggcggcggcgagggaggagacgagggagctcgcgttcccacacttctcggcgttagacggcgccaagatgcagcaggcctcgcacgtcctcgcaagacaggtggcttgcgctgttcttcttcttcttgattttgttcttgctcacttgctgcttgtgaatttctgtttgatattgatatcctaattaattagtttgtggatatgtggatgttttttgcagaaatcgtttggtgccgagagccacggcatcccgcagtacgccgccgccgccgccgtgcacggcgctcaccgtggccagccaccgcatgttctgaatggggctagagtgattccggcctcgtcgccgttcaacccgaacaatccgatgttcagggttcagagctcgcccaacctcccgaatgccgtcggcgccggtggtggcgcgttcaagcagccgcctttcgccatgggcaatgcggttgccggatctacggtcggtgtgtacggaacaaggtagctaatccgctctgttatcgagcacgaggtttgtgacttttgtgagagtggaaatgaaagatgaaattggactgaaatatatagcttgtcttgctttgtatagggacatgccgaaggcgaaggcggcgcaattgaccatcttttatgctggttctgtaaatgtattcaacaacgtctcgccggagaaggtatgatttcattgtgacagatggtgcatctttgtgctgtactatggatgattattaccaattgacatgttttaatagctgtttctcattgttgcaggctcaggaactcatgttcttagctagcagaggatctcttccaagtgcgccgactaccgttgctcgtatgccagaggcacatgtctttcccccagcaaaagtcactgtacctgaggtttcgcctacaaaaccgatgatgcttcagaaaccgcagcttgtttcgtctcccgtgccagccatttccaaacctatctccgttgtgtcacaagctacaagtcttccacggagtgcctcaagctctaatgtcgactccaacgtgacaaaatcttctggtccattggttgttcctcccacaagtttgcctcctccggcccagcctgagacactagccactaccactgctgcagctattatgccgagaggtatgcctattaattgcttgcatgaattgtattgtgatgttatgatagtagttagaacttcagatgaattgttacagtgtatgatttatttctctttttttcattgcagctgtccctcaagcgcggaaggcatcccttgcccgattcttggagaagcgaaaggaaaggtagagatcatatatttaagggacaattgctcatttgaccctgtttcgaagcctaactaccaatctgaccttacattttttagtttgctaatttgaccccgcttttcaaaattgagcatgccgtttgaccctatttacactacgccgttagggtttcacaaaaagaaaagaaaaaaaagcattttactattcaaagtgaccaaattgccctccatacatttcactttcaactcaatctcacgagtcatgacctgcccgaccctctctcgttcacatcttggcggcggcaccggcgccaatgcggtgagcgagcaggaggcaatggcggtgcggggaggaggtgcggcaacggtgccggtgcatggagggaggcggcggcgggggcgccggagcgcggagaggggagtggcgcgaggaggcagctggggtggccgacgcgtggagggaggagggggcggcggtgcgccggtgtgcggagggaggcggcggcggcggcggtggcggtcggcgcatggagggaggcggcggtgggggtgtcggtacgcggagagaggagcggcggcggcggagagaggagcggtgggcgagtggcgcgaggaggcagccagggcggccggcacgtggagggaggagtgggcagcagtgcgccggcatgcggagggaggcggggccggtggcggccggcacgcggagggaggagcggcggcgggggcggcgcgaggagggatgccgtggcagccggcgcggtggtgggagggggggtggcgttgcgccggtgtgcggagggaggcgggggcggcgccggcacgcgaaggagtggtgacgaaacctgcgcgcggagggaggcgcgggtggcaccggtgctggtgctcgggggagcggcgaatgttgcctgtggcgtcggtggcggttgctatttgatattttctctgttggatttgatcataatctgtgtttttacttcattgtatgtaatttgggattcacaaaataagacaatattctgtcaattttttaaaaaaaattatgccaaattttatttgccttattttgtcaaaaaccgtcaaatgaaagacaaattagttaaactgatccaaaattttcaaattaaaaaattgaagctaaatttgttaaacttgtctcaaatgtaaaagatacatcaaattcgttataaatatgtcaaaacgtccaaatatatcgttttgatataacagggtcaaataaacaaggccaaaaggggctatttaccccttagttaacaccgttaactcgatttgacggagtagggtcagcctttatctttgattttgaaaaacagggtcaaataagtaaactgaaaaaaataacgtcaaattggtttctcctaacatttaattgtgattttatcgtatttgagtacagcaactcaattaatttatgctcagaaactgatcttcatccccatgctctgtttcagagtgacgaccgtggcgccatacccattggccaagagcccgctagagagcagcgacacaatggggagtgccaatgacaacaagtcatcttgcacggacattgccctctcaagcaaccgcgacgaatcattgtcattaggccagccaaggaccatcagcttctgcgaggagtcccccagtacaaagctacaaatctgatctgggtgattgcccagtgtccatagattcggccattctgattgatgcaaaagacataaagaatcttgtgcattcaagcggggaggagggcttgggaagaggcataatatatagtatgttattgatggtgttcttgttcttgtttatgatgtgttttcacatggttaattcgcttaatgctggtctagctggtgcaaaccccccaactaacaagagagctgccacttgcagactcttgagtattttttgttggccttgcgccattgtattgcagaaagaaatatgccaaaatttagcagtaccaaaattataggcttacaaaaactgtactattcttgtttcttgtatgaacttacaagctgcagaatgcaag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0401300, RefSeq:Os09g0401300