Os09g0403300

From RiceWiki
Revision as of 20:58, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0403300

Description

Cytochrome P450 family protein

Version

NM_001188894.1 GI:297726918 GeneID:9269428

Length

2234 bp

Definition

Oryza sativa Japonica Group Os09g0403300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:14848068..14850301

Sequence Coding Region

14848068..14848502,14848596..14848998,14849390..14849634,14849703..14849938,14850013..14850301

Expression

GEO Profiles:Os09g0403300

Genome Context

<gbrowseImage1> name=NC_008402:14848068..14850301 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:14848068..14850301 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtcctcgtgtcgctcatggtgatcgccgcgtcgtcgcctctcgtggcgctgcttctgagggcggcgtgggtgaccctgtcctgctactggctgacgccaatgaggatccgccgcgccatggcggcgcagggcgtgcgcggcccgccgccgcgcccgctcgtcggcaacctccgggaggtgtcggcgctcgtggcgagggccaccgccgacgacatgccgtccctcagccacgacatcgtcggccgcctcatgccccactacgtgctctggtccgggacatacggcaagctgttcgtgtacctgtacgggagcgagccgaggctgtgcctgactgacaccgcgctgatcaaggagttcttgtcgtccaagtacgcccacgccaccggcaagtcgtggctgcagaggcaggggacgaagcacttcatcggcggcgggctgctcatggccaacggcgccaggtgggcgcaccagcgccacgtcgtcgcgccggcgttcatggccgacaagctcaaggcacgcgggagagtcgggcgcatggtggagtgcacgaagcaggcgatccgcgagctccgcgacgcggcggcggggcggcgcggcgaggaggtggagatcggcgcccacatgacccgcctcaccggcgacatcatctcccgcaccgagttcaacaccagctacgacactggcaagcgcatcttcctcctcctcgagcacctccagcgcctcacctcccgctccagccgccatctctggatccccggcagccagtatttcccgagcaagtacaggagggagatcaggcggctcaacggcgagctggaggcggtgctgatggagtcgatacggcggagcagggagatcgccgacgaggggagggcggcggtggcgacgtacgggaggggtttgctggctatgcttctgtcggagatggaggagaaggagaagaatggcggcggcggaggcggcgagttcagctacgacgcgcagctggtgatcgacgagtgcaagaccttcttcttcgccggccacgagacgtcggcgctgctgctcacgtgggcgatcatgctgctcgccaccaacccggcgtggcaggagaaggcccgcaccgaggtcgccgccgtctgcggcgaccacccgccgtccgccgaccacctctccaagctcaccgtgctgcagatgatcatccaggagacgctgcggctgtacccgccggcgacgctgctgccgcggatggcgttcgaggacatccagctcggcggcctccggctgccgcgggggctgtcggtgtggatcccggtgctggccatccaccacgacgagtccatctggggccccgacgcgcacgagttccgcccggagaggttcgcgccgggcgcgcgccgcccgtcggccgccggcgccgccaggttcctgccgttcgccgccggcccgcgcaactgcgtcggccaggcgtacgcgctcgtcgaggccaaggtcgtcctcgccatgctcctctcggccttccgcttcgccatctccgacaactaccgccacgcgccggagaacgtgctcaccctccgccccaagcacggcgtccccgtccacctccggccgctgcggccatag</cdnaseq>

Protein Sequence

<aaseq>MAVLVSLMVIAASSPLVALLLRAAWVTLSCYWLTPMRIRRAMAA QGVRGPPPRPLVGNLREVSALVARATADDMPSLSHDIVGRLMPHYVLWSGTYGKLFVY LYGSEPRLCLTDTALIKEFLSSKYAHATGKSWLQRQGTKHFIGGGLLMANGARWAHQR HVVAPAFMADKLKARGRVGRMVECTKQAIRELRDAAAGRRGEEVEIGAHMTRLTGDII SRTEFNTSYDTGKRIFLLLEHLQRLTSRSSRHLWIPGSQYFPSKYRREIRRLNGELEA VLMESIRRSREIADEGRAAVATYGRGLLAMLLSEMEEKEKNGGGGGGEFSYDAQLVID ECKTFFFAGHETSALLLTWAIMLLATNPAWQEKARTEVAAVCGDHPPSADHLSKLTVL QMIIQETLRLYPPATLLPRMAFEDIQLGGLRLPRGLSVWIPVLAIHHDESIWGPDAHE FRPERFAPGARRPSAAGAARFLPFAAGPRNCVGQAYALVEAKVVLAMLLSAFRFAISD NYRHAPENVLTLRPKHGVPVHLRPLRP</aaseq>

Gene Sequence

<dnaseqindica>1800..2234#1304..1706#668..912#364..599#1..289#atggcggtcctcgtgtcgctcatggtgatcgccgcgtcgtcgcctctcgtggcgctgcttctgagggcggcgtgggtgaccctgtcctgctactggctgacgccaatgaggatccgccgcgccatggcggcgcagggcgtgcgcggcccgccgccgcgcccgctcgtcggcaacctccgggaggtgtcggcgctcgtggcgagggccaccgccgacgacatgccgtccctcagccacgacatcgtcggccgcctcatgccccactacgtgctctggtccgggacatacggtgagcacgccacgcgcgcgacacgccgccgccggcgattgttcgttcgttcgttgactctttttggtttgcaggcaagctgttcgtgtacctgtacgggagcgagccgaggctgtgcctgactgacaccgcgctgatcaaggagttcttgtcgtccaagtacgcccacgccaccggcaagtcgtggctgcagaggcaggggacgaagcacttcatcggcggcgggctgctcatggccaacggcgccaggtgggcgcaccagcgccacgtcgtcgcgccggcgttcatggccgacaagctcaaggcacgcgtcgaacacctttcgatttggcatccccccccccccctctcgatctctgactgacgcgggcggtgcaggggagagtcgggcgcatggtggagtgcacgaagcaggcgatccgcgagctccgcgacgcggcggcggggcggcgcggcgaggaggtggagatcggcgcccacatgacccgcctcaccggcgacatcatctcccgcaccgagttcaacaccagctacgacactggcaagcgcatcttcctcctcctcgagcacctccagcgcctcacctcccgctccagccgccatctctggatccccggcagccagtgagtccccccaccccctcgccgccgccggagacgacggtgcattacgagtaaattaatccggattaaggcgggtgttggatgttagttaattacgcggttcgtgcggaccatcactactctctccgttccaggttagaagacaacattaaactgttttaaatttgattaaatttataaataaattaatttcatcaaatcagtaattaaatatatttttataataaatttatcttgggtttgaaaatattactattttttttctactgatcaaatttaaaacagtttgattttgactacaacgaacagaatatctgattagttttggatgcgacaatttgtcatcagatgcacacgttttacgattaattaatgaggaaatatttggcaggtatttcccgagcaagtacaggagggagatcaggcggctcaacggcgagctggaggcggtgctgatggagtcgatacggcggagcagggagatcgccgacgaggggagggcggcggtggcgacgtacgggaggggtttgctggctatgcttctgtcggagatggaggagaaggagaagaatggcggcggcggaggcggcgagttcagctacgacgcgcagctggtgatcgacgagtgcaagaccttcttcttcgccggccacgagacgtcggcgctgctgctcacgtgggcgatcatgctgctcgccaccaacccggcgtggcaggagaaggcccgcaccgaggtcgccgccgtctgcggcgaccacccgccgtccgccgaccacctctccaagctcaccgtggtaaccaccactcgatcgatcgatcgatcgattcggcattgcttgggcgccgccattgatgatgtcatgatgatgagaatctttttcttgcagctgcagatgatcatccaggagacgctgcggctgtacccgccggcgacgctgctgccgcggatggcgttcgaggacatccagctcggcggcctccggctgccgcgggggctgtcggtgtggatcccggtgctggccatccaccacgacgagtccatctggggccccgacgcgcacgagttccgcccggagaggttcgcgccgggcgcgcgccgcccgtcggccgccggcgccgccaggttcctgccgttcgccgccggcccgcgcaactgcgtcggccaggcgtacgcgctcgtcgaggccaaggtcgtcctcgccatgctcctctcggccttccgcttcgccatctccgacaactaccgccacgcgccggagaacgtgctcaccctccgccccaagcacggcgtccccgtccacctccggccgctgcggccatag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0403300, RefSeq:Os09g0403300