Os09g0520800

From RiceWiki
Revision as of 21:02, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os09g0520800

Description

Glycoside hydrolase, family 29 (alpha-L-fucosidase) protein

Version

NM_001070238.1 GI:115480218 GeneID:4347611

Length

1744 bp

Definition

Oryza sativa Japonica Group Os09g0520800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:21091800..21093543

Sequence Coding Region

21091871..21092558,21092639..21092878,21092967..21093523

Expression

GEO Profiles:Os09g0520800

Genome Context

<gbrowseImage1> name=NC_008402:21091800..21093543 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:21091800..21093543 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgggtcggtgcgcgtcgccgctttgcgctctcgccgccgcgctgatcgccgccgttgtggcggccacatcgtcgtcgttggcggaggcgacggcgacgccgccgctgccggtgctgccggtgccgacggcggcgcagctgaggtggcagcggcgggaggtgatcatgttcttccacttcgggatgaacacgttcacggactccgagtggggcacggggcgggagccgccggcggcgttccgcccggcggcgctggacgcgtcgcagtggatggacgcggcggccgcggcgggcgcgtcgctcgtcgtcctcgtcgccaagcaccacgacgggttctgcctctggccgtccgcgcacacggcgcactccgtccgcgccagcccgtggcgcggcggccgcggcgacgtcgtgcgggagttcgccgacgccgcgcgcgcccgcggcctcgacatcgggatctacctctcgccgtgggatcgccacgacaagcggtacggccgcgaggtcgcctacaacgagtactacctcgcccagctccacgagctcctcactgggtacgggagcgtgtcggagatatggttcgacggcgccaaggggaagaacgcgacgaacatgacgtaccatttccaggagtggttccagacggtgcggcagctgcagagctccatcaacatcttctccgacgacggccccgacctccggtgggtcggcgacgagaatggctccgccggatccacctgctggtccaccatcaaccgctccaagatcaccatcggcgaggccggcatcgagaagtacctgaacaccggcgacccgagggggaaggactgggtgccgccggagtgcgacgtgtcgatccggccggggtggttctggcacaagaacgagacggcgaagccgctgccggagctgctcgaggtatactacaactcggtgggccgcaactgcgtgctgctgctgaacgcgccgccgaacaccacgggcctcgtcgacgccgccgacatcgccaggctgcgcgagttccgcaccgccgtgacggccatcttcggcaccgacctcgccgcgggcagcgcggcgagggcgagcagcgagcgcggcggcaggttcgcggcggccaacgtgctcgacggccgcgacgacacgtactgggcaccggccgcggcggaggcggaggacggcggcgggtactggatcgagctgcggcggccggcgtcggcggcggcgaggaagttcaacgtggtgaggatccaggagcacgtggcgatggggcagcgggtggagcggcacgaggtgtacgtggacggcggcggcgcggcggtggcgagcggcacgacggtggggcacaagcggctgcacaggctgggcgcccccgtggcggggcggacggtgagggtgtggctggcgtcgcggcgaggcccgccgctgctgtcggcggtggggctccacctcgaccccttcgccgccggcgggggcacgatgtga</cdnaseq>

Protein Sequence

<aaseq>MMGRCASPLCALAAALIAAVVAATSSSLAEATATPPLPVLPVPT AAQLRWQRREVIMFFHFGMNTFTDSEWGTGREPPAAFRPAALDASQWMDAAAAAGASL VVLVAKHHDGFCLWPSAHTAHSVRASPWRGGRGDVVREFADAARARGLDIGIYLSPWD RHDKRYGREVAYNEYYLAQLHELLTGYGSVSEIWFDGAKGKNATNMTYHFQEWFQTVR QLQSSINIFSDDGPDLRWVGDENGSAGSTCWSTINRSKITIGEAGIEKYLNTGDPRGK DWVPPECDVSIRPGWFWHKNETAKPLPELLEVYYNSVGRNCVLLLNAPPNTTGLVDAA DIARLREFRTAVTAIFGTDLAAGSAARASSERGGRFAAANVLDGRDDTYWAPAAAEAE DGGGYWIELRRPASAAARKFNVVRIQEHVAMGQRVERHEVYVDGGGAAVASGTTVGHK RLHRLGAPVAGRTVRVWLASRRGPPLLSAVGLHLDPFAAGGGTM</aaseq>

Gene Sequence

<dnaseqindica>986..1673#666..905#21..577#aacacaaaacgggagaagagatgatgggtcggtgcgcgtcgccgctttgcgctctcgccgccgcgctgatcgccgccgttgtggcggccacatcgtcgtcgttggcggaggcgacggcgacgccgccgctgccggtgctgccggtgccgacggcggcgcagctgaggtggcagcggcgggaggtgatcatgttcttccacttcgggatgaacacgttcacggactccgagtggggcacggggcgggagccgccggcggcgttccgcccggcggcgctggacgcgtcgcagtggatggacgcggcggccgcggcgggcgcgtcgctcgtcgtcctcgtcgccaagcaccacgacgggttctgcctctggccgtccgcgcacacggcgcactccgtccgcgccagcccgtggcgcggcggccgcggcgacgtcgtgcgggagttcgccgacgccgcgcgcgcccgcggcctcgacatcgggatctacctctcgccgtgggatcgccacgacaagcggtacggccgcgaggtcgcctacaacgagtactacctcgcccagctccacgagctcctcactgggtcagtgacacgcttgacacactcacacacgtcgccgccgccgccgccattgctgacgtcgatcgagcttgatgtgtttggttgtcaggtacgggagcgtgtcggagatatggttcgacggcgccaaggggaagaacgcgacgaacatgacgtaccatttccaggagtggttccagacggtgcggcagctgcagagctccatcaacatcttctccgacgacggccccgacctccggtgggtcggcgacgagaatggctccgccggatccacctgctggtccaccatcaaccgctccaagatcaccatcggcgaggccggcatcgagaagtaggtaacactacactaaacacgcgttaattagttcggtggccaccgtcgtcccgccattgctgacatcacccacccaggtacctgaacaccggcgacccgagggggaaggactgggtgccgccggagtgcgacgtgtcgatccggccggggtggttctggcacaagaacgagacggcgaagccgctgccggagctgctcgaggtatactacaactcggtgggccgcaactgcgtgctgctgctgaacgcgccgccgaacaccacgggcctcgtcgacgccgccgacatcgccaggctgcgcgagttccgcaccgccgtgacggccatcttcggcaccgacctcgccgcgggcagcgcggcgagggcgagcagcgagcgcggcggcaggttcgcggcggccaacgtgctcgacggccgcgacgacacgtactgggcaccggccgcggcggaggcggaggacggcggcgggtactggatcgagctgcggcggccggcgtcggcggcggcgaggaagttcaacgtggtgaggatccaggagcacgtggcgatggggcagcgggtggagcggcacgaggtgtacgtggacggcggcggcgcggcggtggcgagcggcacgacggtggggcacaagcggctgcacaggctgggcgcccccgtggcggggcggacggtgagggtgtggctggcgtcgcggcgaggcccgccgctgctgtcggcggtggggctccacctcgaccccttcgccgccggcgggggcacgatgtgacgtcacaaaaacagtagtaatatggaataatttggtgagatataatatcatcatgagcaataattggtttg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0520800, RefSeq:Os09g0520800