Os09g0541900
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os09g0541900 |
|---|---|
| Description |
Similar to 26S proteasome subunit RPN3a |
| Version |
NM_001070352.1 GI:115480446 GeneID:4347735 |
| Length |
3368 bp |
| Definition |
Oryza sativa Japonica Group Os09g0541900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:22170483..22173850 |
| Sequence Coding Region |
22170733..22171245,22171328..22171567,22171714..22171824,22171907..22171961,22172109..22172245 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:22170483..22173850 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:22170483..22173850 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgccggaggacgtcgagatgaacgactcccagccccagcccgccgccgcgccaccgcccgcggcctccaccttgcagcatctgaaggagatcgcgtcggtgatcgaggccgggtcgctgaccaaggaggttcgccggatctcccgcgccgtgcgcctcaccgtcgcgctccgccgccgcctcgccgcccgtgacgtcgccgccttcctcgccttcgcgctgccgcattcctcggaagccttcgcccgcctttcctccctcctgcccaaggaagatgggagtgaaatggatgttgatttggcagctccagcggctcaagtgtcaattaagcatggtctcccagagattgaaatatactgttacttgcttgtgctgattttccttattgataataagaaatatgatgaggctaaagcatgtgcttctgcaagcattactcgtttgaagaatcttaacaggagaacagtcgatgttttagcttctagggttttcacctattactcttatgtccacgaactcaccagcagccttgctgaaattcgtggaactcttctggcattgcacagaatggcaactttacatcgtgatgagcttggtcaggaaactctactcaacctgcttcttcgcaactacctgcactacaacttgtatgaccaagcagaaaagcttaggtccaaggcaccgcgttttgaagcacattctaatcagcagttctgcaggtatctgttctacttgggaaaaattaggacaattcagttggagtacactgatgcaaaggaaagcctactgcaagctgctcgaaaggcacccactacagctcgtgggttccgagttcagtgcaacaagtgggctatcatagtgagattacttttaggagaaataccagagagaactgtttttatgcagaaaggaatgaaggctgctttggcaccatattttgagcttacaaatgctgttcgagttggggaccttgaattgttcagagcagtggcagaaaaatttgctagcactttcagcgcggataggacgcgcaatttgatagtgaggctgcgccacaatgtcattcggactggattgcgcaacataagcatttcatactcacggatctcccttgctgacattgccaagaagctgaggttggactcagagaaccctgttgctgatgctgaaagtattgtagccaaagcaatcagggatggggcaattgatgccaccattgatcatgccaatggttggatggtgtcaaaagagactggtgatgtctactcaacgaatgagccacagattgctttcaattcaaggattgcattttgcttgaacatgcacaacgaagcggtcaaagcactgaggttccctccgaattctcacaaggaaaaggagagtgctgagaagaggcgcgagaggctccaacaggaggaagaactagcaaaacacatggctgaggaggacgatgacgacttttag</cdnaseq> |
| Protein Sequence |
<aaseq>MPEDVEMNDSQPQPAAAPPPAASTLQHLKEIASVIEAGSLTKEV RRISRAVRLTVALRRRLAARDVAAFLAFALPHSSEAFARLSSLLPKEDGSEMDVDLAA PAAQVSIKHGLPEIEIYCYLLVLIFLIDNKKYDEAKACASASITRLKNLNRRTVDVLA SRVFTYYSYVHELTSSLAEIRGTLLALHRMATLHRDELGQETLLNLLLRNYLHYNLYD QAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPTTARGF RVQCNKWAIIVRLLLGEIPERTVFMQKGMKAALAPYFELTNAVRVGDLELFRAVAEKF ASTFSADRTRNLIVRLRHNVIRTGLRNISISYSRISLADIAKKLRLDSENPVADAESI VAKAIRDGAIDATIDHANGWMVSKETGDVYSTNEPQIAFNSRIAFCLNMHNEAVKALR FPPNSHKEKESAEKRRERLQQEEELAKHMAEEDDDDF</aaseq> |
| Gene Sequence |
<dnaseqindica>2606..3118#2284..2523#2027..2137#1890..1944#1606..1742#1395..1532#322..512#113..191#agtgaaccggaataggccacacttgtcgcgatattatcctttgctcttctcttcttctcttcccccgcacgcatcgcacccgacctcgtcgccgtcgccgacgccgccagccatgccggaggacgtcgagatgaacgactcccagccccagcccgccgccgcgccaccgcccgcggcctccaccttgcagcgtaagtagccggacctcctctcgggctccacaaaaccctagcttagctttcggcgggggagagagagagtaactgagtttttttttttgtttggtttggtttgtttgggtttgcgcggcggtgcgtgcagatctgaaggagatcgcgtcggtgatcgaggccgggtcgctgaccaaggaggttcgccggatctcccgcgccgtgcgcctcaccgtcgcgctccgccgccgcctcgccgcccgtgacgtcgccgccttcctcgccttcgcgctgccgcattcctcggaagccttcgcccgcctttcctccctcctgcccaaggtaatttctacactgaatcggaggaattcggtgggtgaacttagttgctacttactagatgggtgatggggaataaatgactggcgatgcttgcatcttaggattatgaaactgagaaaaaaaagggggggggggggattttcgggatgcttggctgcttatttcatcgctgatgtgatggcacagtagagttctgtatattagagctgtttactgtttagaagatagccgtttgactcgaaaaatatagcaacattgatcttttgaatttggaggcagatgaaaataatttagatgtcacatgtgatgtttttgtttcatcggcttggcttgttaaacacatggtagatcattcagaattttttatctctttggaagaaaggggaactcagaatcagtcttctaaaagtcggcgctaggtagcaggtagcctctgtgattaggcgttagatggtggctgaacttgcttggtgggtattttgttgctattttagtgttgtatagtctaattttcatgtgtgcttgccaatttcttggatttgactagctggtctgatccaggcagggcctaggcaccaattaggcgctaggtgccaccagctagcgcctagcgccttcttgaatgctctgaagagatcattgttatgaagaaactgtagttgtatttgtgatccagtgatttgtttaaatcattttgttgcgctactacttccactgttgaagagataggtttcttgtgctctgatgcttgatagcctccggttcggtctttaggagctgtagtttgtttcacttctaccgtatatatcttaatttttttgaaactgatgtctctatttttttttatatattcttaacattcatataatgctgattttttaggaagatgggagtgaaatggatgttgatttggcagctccagcggctcaagtgtcaattaagcatggtctcccagagattgaaatatactgttacttgcttgtgctgattttccttattgataataagaaatatgatgaggtatgactgagatttgcctcctttttttttttgttctaggtgataacttactaatctgatgctttttgttcaggctaaagcatgtgcttctgcaagcattactcgtttgaagaatcttaacaggagaacagtcgatgttttagcttctagggttttcacctattactcttatgtccacgaactcaccagcagccttgctgaaattcgtgggtgagttcattgaatcatggctctcaatctgtggtattaggaatgccttcttcagttgtgttattacttttcagtaattcctaggtacctaataagctcttcttttcttctgttttgatttacttgttacatgctgtgttttttcagaactcttctggcattgcacagaatggcaactttacatcgtgatgagcttggtcaggttgtgtccatgcctactttcactttaatgattacataagcgttgtcaaactacagaaaatgactaatattttatatggcaggaaactctactcaacctgcttcttcgcaactacctgcactacaacttgtatgaccaagcagaaaagcttaggtccaaggcaccgcgttttgaagcacattctaatcagcaggtaattcatcaactagctcacttgttaattcatttgataaattgtactgaggctgattatcaatttaatgattactgaacggtgaaattgcattatgccatcttattatgtagtcaaacaagtgctaacttctattgctatcgcagttctgcaggtatctgttctacttgggaaaaattaggacaattcagttggagtacactgatgcaaaggaaagcctactgcaagctgctcgaaaggcacccactacagctcgtgggttccgagttcagtgcaacaagtgggctatcatagtgagattacttttaggagaaataccagagagaactgtttttatgcagaaaggaatgaaggctgctttggcaccatattttgagcttacaaatgtaagttctacttctgtggaaaaatacaacatactgctaagcagtacagttttaactgtttctttttatgtatgatctacaggctgttcgagttggggaccttgaattgttcagagcagtggcagaaaaatttgctagcactttcagcgcggataggacgcgcaatttgatagtgaggctgcgccacaatgtcattcggactggattgcgcaacataagcatttcatactcacggatctcccttgctgacattgccaagaagctgaggttggactcagagaaccctgttgctgatgctgaaagtattgtagccaaagcaatcagggatggggcaattgatgccaccattgatcatgccaatggttggatggtgtcaaaagagactggtgatgtctactcaacgaatgagccacagattgctttcaattcaaggattgcattttgcttgaacatgcacaacgaagcggtcaaagcactgaggttccctccgaattctcacaaggaaaaggagagtgctgagaagaggcgcgagaggctccaacaggaggaagaactagcaaaacacatggctgaggaggacgatgacgacttttagattggtgatttcttttcatgctttcagttgctgcctcaagggtttcattttgaagcatgggcatccattcagttttaagagacggaagatctcgaaatgccaaccctgcttttctgggatagttgaaaccatggaaccgttgacatttaattcagtgtgttttatgtttttaacaatttttttatcactcaaaccgcttagaaggcaatgtattctttcctgaaatactgtaccgttcaatccttggggc</dnaseqindica> |
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