Os12g0110400

From RiceWiki
Revision as of 21:31, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os12g0110400

Description

Conserved hypothetical protein

Version

NM_001072497.1 GI:115486955 GeneID:4351293

Length

2704 bp

Definition

Oryza sativa Japonica Group Os12g0110400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:561988..564691

Sequence Coding Region

562118..562459,562656..562724,562819..562923,563624..563743,564085..564174
,564259..564375

Expression

GEO Profiles:Os12g0110400

Genome Context

<gbrowseImage1> name=NC_008405:561988..564691 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:561988..564691 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgacgacttcggggacttcgacctcgacgacggggacggcgtgggggacgacgaagacctcgacaacgagcaggactacgacgtcgactacgaccgcctgctcgcccccgtcaaggcgccgccgcgcccgctgtcgggggagggcgacgaggaggaggagggggacatcgccatggtcgccgcccagagcttcgtctccacgcaggactccgcctccgacaccgtggtcgactactccgtcaacgaggacgaattccacaagattcgcctactgcactgcgatttttttatccgcaaggtgcctgaccccgacgacgacgtcttcgacttccgggagatgtatgtcacgccgcctgacactgacatctattccatcccaagggttcttgctccgatgccgcaaaagtatttgaggtgcacgaagaaaaattttggtcgttaccatgttagtgagccgcctgttgagcatttgcgtgatcccctatacaagacagaaagggagatcatgaaggttttcttaacaaaacattacaggaataggcggtgtaacgacccagattttttccttgattttgaagagatatatgttattgactcaaaagcaaggtcaatcacgagagcaaaagttgtggttagtgtccctgaaggaaagaagagggacaggagaaatgacttgctactcatacgagatggaggggaatcattcagaataatcgacaagaccaaaagggatgatgcgaccactgtgatccaaagagaggagtgggcaaagtcgaggcaagatgtggagaagcactttaggaagctccgcgactttgactactcaaattggttctga</cdnaseq>

Protein Sequence

<aaseq>MDDDFGDFDLDDGDGVGDDEDLDNEQDYDVDYDRLLAPVKAPPR PLSGEGDEEEEGDIAMVAAQSFVSTQDSASDTVVDYSVNEDEFHKIRLLHCDFFIRKV PDPDDDVFDFREMYVTPPDTDIYSIPRVLAPMPQKYLRCTKKNFGRYHVSEPPVEHLR DPLYKTEREIMKVFLTKHYRNRRCNDPDFFLDFEEIYVIDSKARSITRAKVVVSVPEG KKRDRRNDLLLIRDGGESFRIIDKTKRDDATTVIQREEWAKSRQDVEKHFRKLRDFDY SNWF</aaseq>

Gene Sequence

<dnaseqindica>131..472#669..737#832..936#1637..1756#2098..2187#2272..2388#gccgctctccaaaaccctagctaacccctcctcctccaggtcccttctcctcgccgcccccctctcccgcggcgccaccccactgcccctcctgcggcgcgatgtctccgcggcctacggcgacgacgacatggacgacgacttcggggacttcgacctcgacgacggggacggcgtgggggacgacgaagacctcgacaacgagcaggactacgacgtcgactacgaccgcctgctcgcccccgtcaaggcgccgccgcgcccgctgtcgggggagggcgacgaggaggaggagggggacatcgccatggtcgccgcccagagcttcgtctccacgcaggactccgcctccgacaccgtggtcgactactccgtcaacgaggacgaattccacaagattcgcctactgcactgcgatttttttatccgcaaggtgcctgaccccgacgacgacgtcttcgacttccgggaggtatacatcccatttatctgtctaacactagtacattcttttgctagttgcctgtgttatcaagcatgtatttgacaatgctacctgttcatgcaacatctcatgacacattcattgcagtgctatccaaattgacacaactcaatcttttaggttgtttgaactaaatcatgtgttccttcataatgtgcaacagatgtatgtcacgccgcctgacactgacatctattccatcccaagggttcttgctccgatgccgcaaaaggtgcccatatatctctctctctttttttttgtctgtttcaagcaaatgtaaatgggcattgaggtgtaaccattgttttcctggttgaaagcagtatttgaggtgcacgaagaaaaattttggtcgttaccatgttagtgagccgcctgttgagcatttgcgtgatcccctatacaagacagaaagggagatcatgaaggtatgtgtgagagtgttgtttcctctgctaatttgttctaccactctgttatgcaattatatttgtcataaagaaagattgagtgggtaatgctgcttgaaagctggaagttgccaaccttaaagattctgactgaaatttttccctatttttttgccatacttgtcagagtagagaccttattgttgtttgatgagaaattgcccttactgatggtagtagttacttgtgaagattacatgtcatgccaaattgcttagcaacaggttttattccacgtggtggttatctgaatttatagatcaaattgtgggatatccgatgcattgtttattgtcctcaaagatcatatattgctaaataggaaataaggtaagaactaaaattccttaggagtttgaaccagctagcttctaaaattcctcagggtctagtcagtggaccactggacccctattaggccatttttaaactcaattcccatccaggcagtgtagcaattctctgttattcttgtttaacgtgtctttctgctttatgcttgttttgtctgtcataatcaataccagttgttcttctcaccagggactcagacttacactatttttagtttctacccaatatgaccttaagaacatatgtgctgggtctgtggttttcttcaaaatttatatatgttccatatttgtttatgctgtaggttttcttaacaaaacattacaggaataggcggtgtaacgacccagattttttccttgattttgaagagatatatgttattgactcaaaagcaaggtcaatcacgagagcaaaagttgtggtaagacgtttgaaatttaaattcttgaagcattcagaacagaaccattatatatttaggttgcaggagctctttcatcactaattttagtagaaaaaagtatattagtatctgcatgatgatttgaaggaactagtttaatggtttccatcctttgaaatattgcatgcaaccatttggatgactggtaaactgggtctgtgatgtcattggtttcacagttagtcctatgccttttcatctagacatttgtgacaagcatttatcttcacttttttttttgcatagtttaattaatttttgttttgttgagattattgatatcgagctgcctattacaggttagtgtccctgaaggaaagaagagggacaggagaaatgacttgctactcatacgagatggaggggaatcattcagaataatcgacaaggtactatgcttgtttcatgaatactatctactaatgttgttgtagtaggaggcttcaaaggctaatgtgggctgtttgtatcagaccaaaagggatgatgcgaccactgtgatccaaagagaggagtgggcaaagtcgaggcaagatgtggagaagcactttaggaagctccgcgactttgactactcaaattggttctgaagaaatagtagctggagtcattcagcagagaaattattttgctaattttgcagctgcttatattagaggaagcgaccatggaccatggtgctcaagggagaatcgccatcttcgagtaggctaattatgtgtactttaggtttttgtagcaggtagaaggcatgccacttagcgagcctatctgtagaaaactgaaatgtttgatgcttgtgaatgcactaccttgttgagtagccaacgaatatgtggtccttggattcagaatgcacgtgttttttatagtatcggatatctatacttggattcagaatttcct</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0110400, RefSeq:Os12g0110400