Os11g0123600

From RiceWiki
Revision as of 21:14, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0123600

Description

Sodium/hydrogen exchanger family protein

Version

NM_001189398.1 GI:297727926 GeneID:9272586

Length

2735 bp

Definition

Oryza sativa Japonica Group Os11g0123600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:1067486..1070220

Sequence Coding Region

1067506..1068735

Expression

GEO Profiles:Os11g0123600

Genome Context

<gbrowseImage1> name=NC_008404:1067486..1070220 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:1067486..1070220 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgatggacaagacgcacctgatgtgcttctacccgagcaagatcaccatgggtggcgtctggacgggcgacaacccgctcgacttctccatacctctcctcctcttccagatcctcctcatcacctccaccacccgcgccgccaccctcctcctctcccctctccgcctccccacctacatctcccagatcctcgctagcttcctccttggcccctccatccttggccacctccctcacttctccaacctcgtcttccctgtccgtagcctcttcgtccttgagtccatggccctcctcggcctcgtctactacaccttcatcgtcggcgtcgagatcgaggtctccgccatcacccgtgccggcatccatagcttcggcttcgctgtcggctgcgcgctcccgcccttcctcgtcggcgccctcaccggctacgtcgcgctcagcactgacgacaaacgcaagggtgacactttcctgaacaagctctccttccccatcttcctcggctccaccttctcctccaccgccttctccgtcctcgcccgcaacatcgccgagctcaagctcgccggcaccgacgtcggccagctcacgctctccgcatcactcatcaacgacaccttcgcctggaccggcctcaccgtcgccacggtgctcggccactcgcgctgcaccatcacgcagaccacgtggacgctcacgtcgggcgtcgtcatcttcggcgccagctacctcctgctccgccccatgctcctgcggctggcgaggcgcgccgccgagggggaggcggtcggcgaggaccgcgagtgctggattctgatcggcgtcatggttgcggcgctggtggcggacgcagggggcacgcacgccatattcggcgccttcgtgttcggcctcgccgtgcccaacgggccggtcggggtggcgctggtggagaaggtggaggacttcgtggtgggtgctctgctcccgctcttcttcgccctcagcggcctccgcaccgacaccgccaagatcaccaacatgcattctgccgtgctgctcatggtcgctgccatggtcgctgcggtcttgaaggtcgccgccgcaatcggcgtcgccggtgtgtttggcatgccactcagtgacggcacgtccatcgggctgctgctcaacaccaaggggatcatcgagctcgtcatcctcaacattgcaaggaacaaaggggtaatccattttaattaa</cdnaseq>

Protein Sequence

<aaseq>MSMDKTHLMCFYPSKITMGGVWTGDNPLDFSIPLLLFQILLITS TTRAATLLLSPLRLPTYISQILASFLLGPSILGHLPHFSNLVFPVRSLFVLESMALLG LVYYTFIVGVEIEVSAITRAGIHSFGFAVGCALPPFLVGALTGYVALSTDDKRKGDTF LNKLSFPIFLGSTFSSTAFSVLARNIAELKLAGTDVGQLTLSASLINDTFAWTGLTVA TVLGHSRCTITQTTWTLTSGVVIFGASYLLLRPMLLRLARRAAEGEAVGEDRECWILI GVMVAALVADAGGTHAIFGAFVFGLAVPNGPVGVALVEKVEDFVVGALLPLFFALSGL RTDTAKITNMHSAVLLMVAAMVAAVLKVAAAIGVAGVFGMPLSDGTSIGLLLNTKGII ELVILNIARNKGVIHFN</aaseq>

Gene Sequence

<dnaseqindica>21..1250#aggagctatggaatcacacaatgtcgatggacaagacgcacctgatgtgcttctacccgagcaagatcaccatgggtggcgtctggacgggcgacaacccgctcgacttctccatacctctcctcctcttccagatcctcctcatcacctccaccacccgcgccgccaccctcctcctctcccctctccgcctccccacctacatctcccagatcctcgctagcttcctccttggcccctccatccttggccacctccctcacttctccaacctcgtcttccctgtccgtagcctcttcgtccttgagtccatggccctcctcggcctcgtctactacaccttcatcgtcggcgtcgagatcgaggtctccgccatcacccgtgccggcatccatagcttcggcttcgctgtcggctgcgcgctcccgcccttcctcgtcggcgccctcaccggctacgtcgcgctcagcactgacgacaaacgcaagggtgacactttcctgaacaagctctccttccccatcttcctcggctccaccttctcctccaccgccttctccgtcctcgcccgcaacatcgccgagctcaagctcgccggcaccgacgtcggccagctcacgctctccgcatcactcatcaacgacaccttcgcctggaccggcctcaccgtcgccacggtgctcggccactcgcgctgcaccatcacgcagaccacgtggacgctcacgtcgggcgtcgtcatcttcggcgccagctacctcctgctccgccccatgctcctgcggctggcgaggcgcgccgccgagggggaggcggtcggcgaggaccgcgagtgctggattctgatcggcgtcatggttgcggcgctggtggcggacgcagggggcacgcacgccatattcggcgccttcgtgttcggcctcgccgtgcccaacgggccggtcggggtggcgctggtggagaaggtggaggacttcgtggtgggtgctctgctcccgctcttcttcgccctcagcggcctccgcaccgacaccgccaagatcaccaacatgcattctgccgtgctgctcatggtcgctgccatggtcgctgcggtcttgaaggtcgccgccgcaatcggcgtcgccggtgtgtttggcatgccactcagtgacggcacgtccatcgggctgctgctcaacaccaaggggatcatcgagctcgtcatcctcaacattgcaaggaacaaaggggtaatccattttaattaatcgatcgccatgcagtgcattgcatgtcgtgattaattaagggtaggtagcttcttgtgttgtgtagatcatgagtgaccagtcgttcacggtgctggtgttcgtgtcggcgctgatcacggcgatggtgagccctttcctggggatggtggtgaagccggcgcggcgcctcgtgttctacaagcggcgcacggtcgcgtgggctcacccggaatcagagctccgcgtgctggcctgcgtccacgtgccgcgcgacgtgcccgcgctactgacgctcctcgatgtggtgacgccgtcgagccggtcgcccgtgggcgtcctcgccctccacctcatcgagttcgtcggccgctcctcggcgctcctcctcatcaatgcctctgcgccgtcgtcgtcctcctacgacgcctccgtccacgggcgcagccacacggagatgcagttcaagcacatctcccacgccttcatggcgtacgaggagcagtcggtgggcgtgtcggcgcgcaccatggccgccgtctcgccgtacgagtccatgcacgaggacatcacctccgccgcggagaaccagcactcggcgctcatcctgctcccgttccacaagtaccggtcggtggacggcggcctggaggtgtcccacccggcgatacagccgctcaactgcaacgtgcagagcttctcgccgtgcacggtgggcatcctcgtggaccgtggcctcgccgcggtgccgggtggcgggtaccgcgtggtggcgctcttcttcggcgggagcgacgaccgggaggtggcggcgcttgcgacgcgcatggtgaggaacccgaccatcgacctgacattgctccggttcgtccagaagggaggaagcttcactgcaagcgagttcgacgcgctgaaagagcggaaggccgacgaggggtgcctgcgtgacttcctagagagggcgaacgagggcggcggcgcgacggtggagtacagggagcgcggcgtgttcaacgcgagcgagatggtgggggagatacagagcgtggaggccatggggaacaaggacctgttcgtcgtcgggaaggtgcccggggggtccgggctgacggcggggatggcggagtggagcgagtcgccggagctggggccgatcggcgacctgctggcgtccaaggacttccagacgacggcgtcggtgctggtgctgcaggcgtacgggaggccggtggcagtggtgggagctggagcgggagccatgtcggtggattttggcggcgacagcgtggcgatggcggagaggacagccagtgggcgtaggccatgggcacgaccgggtgtatgatcatcgatcatcggagaatttttctttctagaattggtgaccgttgagatagatgtaggaatagctgataatatggtgtggataattgcatattatggtataaaatttatacatagtgcaaagcttaaacatagttcttggaaaaataaagctaaataacc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0123600, RefSeq:Os11g0123600