Os11g0141000

From RiceWiki
Revision as of 21:15, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os11g0141000

Description

Similar to PP2A regulatory subunit-like protein

Version

NM_001072246.1 GI:115484104 GeneID:4349739

Length

4149 bp

Definition

Oryza sativa Japonica Group Os11g0141000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:1876609..1880757

Sequence Coding Region

1876725..1876812,1876863..1876885,1876989..1877111,1877224..1877310,1877448..1877552
,1877740..1877901,1878476..1878511,1878641..1878712,1879317..1879594
,1880318..1880344,1880492..1880552

Expression

GEO Profiles:Os11g0141000

Genome Context

<gbrowseImage1> name=NC_008404:1876609..1880757 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:1876609..1880757 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gaatggtcgaggtggaggaagtcagcaacaagatgcaggtgcagatgcgcctccaccccgccgcggcggcggaggaggaggacgccgacctccagctcctccctcgaccaggaagggatccgcaagggggtcgacctgctgcggcggtgcgacgagatggtcagtaaggtcggcctcttctcctccaacgagaccaaggatgacatctccaccgccaacctcaaatacctactcgtaccgtactaccttggggaaatgactgaaagggtagcgcaggaagatcggatcccagtccttaaggcgtcgcaggatcatttgaaggaattcatttctatctgtgaagcactggagcttatatcagaggatgagcttgaaatatctaggcagaagcaacctgataccatggcaaatcgaagagcacagaaggttgcacggttcaagcgccaaaaggctgcagaaacaaagctcctagaaatcaaggagaggaaagaaaggcgtaggcggtcattgagagcagctgctttatcagctcctattgaagctggggaggaagatgcttttgaggatgatggagaggaagaaagagaggcatggttagctactatctcattggctctatgcaaggcttttgaccttcttgacatgttaaagaaggaagaagaaatgcttccggcagtaaaagaaaggaaagcgaaggatggtaatgcatttgctcgtgaaatgcttgatgaacgtacaaaaagggctgaagcatggcaccataatgctgccaaccgtgcaccatactccaaaccagctgatccaatcacttgtgcaacatttgctcaagatgtcattgaaggtagagcaagtgtttcacaagcacatgagcacaaacaccagccgctgatatttggccctgcaagtcttgttggtggaggactaaccagtgaaagagagagaatggcagcacaagtttttcagccaagttataggttgccaacgatgagcatagaagaagctgactggaaggacgataaccctcgtggtgcaggcaacaagaagctcactccctgtggctaa</cdnaseq>

Protein Sequence

<aaseq>EWSRWRKSATRCRCRCASTPPRRRRRRTPTSSSSLDQEGIRKGV DLLRRCDEMVSKVGLFSSNETKDDISTANLKYLLVPYYLGEMTERVAQEDRIPVLKAS QDHLKEFISICEALELISEDELEISRQKQPDTMANRRAQKVARFKRQKAAETKLLEIK ERKERRRRSLRAAALSAPIEAGEEDAFEDDGEEEREAWLATISLALCKAFDLLDMLKK EEEMLPAVKERKAKDGNAFAREMLDERTKRAEAWHHNAANRAPYSKPADPITCATFAQ DVIEGRASVSQAHEHKHQPLIFGPASLVGGGLTSERERMAAQVFQPSYRLPTMSIEEA DWKDDNPRGAGNKKLTPCG</aaseq>

Gene Sequence

<dnaseqindica>117..204#255..277#381..503#616..702#840..944#1132..1293#1868..1903#2033..2104#2709..2986#3710..3736#3884..3944#gacgtttccagtttcccttccttccttcctccgcgtcgcttcccttccttcgcgcggcgctgctccggtagggttttagccggcgatctctcccctctcgcgcgctcggcgactgagaatggtcgaggtggaggaagtcagcaacaagatgcaggtgcagatgcgcctccaccccgccgcggcggcggaggaggaggacgccgacctcccgctccccgccctcttcgacaaggcgtcccacctccactccctcgcctccagctcctccctcgaccaggttttccttcgattcacccccctttctcctcatccccatcaaccctctcgtggcggttttgtgcgagcgctcactgtgattgcttggtttgggatatttgcaggaagggatccgcaagggggtcgacctgctgcggcggtgcgacgagatggtcagtaaggtcggcctcttctcctccaacgagaccaaggatgacatctccaccgccaacctcaaatacctactcgtatgtttgtttcctgcactacatctgcgtttatattcgtttctcttaccgtatcatgtttgtgcatctgcgacatgtggttatatctgtgattccgattgattttcttcaggtaccgtactaccttggggaaatgactgaaagggtagcgcaggaagatcggatcccagtccttaaggcgtcgcaggatcatttgaaggttatatcagtttgtcctgtcacatttagttgatttggtgcatatttgtcatgtctttcttatgcccttttcaattgggagcactctgtcatcacaacactcatgtttctcatgttttaatcactacggttacacaggaattcatttctatctgtgaagcactggagcttatatcagaggatgagcttgaaatatctaggcagaagcaacctgataccatggcaaatcgaagagcacagaaggtgagccttgacgaaatatttttctcaaatatgttaaaggggtcatcaatcattctgcaatttacgaacacaataaactgggatccaaatctattattgagactgcaaaatctgggactcataatctgcttgaccttttccaaagtcggttaatttccactctaattttcttgtttgccgaacctaggttgcacggttcaagcgccaaaaggctgcagaaacaaagctcctagaaatcaaggagaggaaagaaaggcgtaggcggtcattgagagcagctgctttatcagctcctattgaagctggggaggaagatgcttttgaggatgatggagaggaagaaagagaggttagcagttagcaccaggcatttagaacccatttacgtagcaaatctgatcttgtttaccaaatggaaacatcgtgatatattcttaaattaccacatagcatatttgaaaataccccaaactaaaattagctacaatgtactagaagtggaagaagaatatttactttttccagaaaagagaaggaaaggaaaggctttgttctgttcaataaaagatggaatttgacaaatttgatgattcaagataagttttaaaaaatcccatagggaactgatcacatttcctgaattgacccatttttgttcaaatgaaacacacagcgtatttattctgtactggcagattgtcaccaccaatctttttcctgtaacaatatgatgctcattgcctttcctgtgctttttatatacgatctcttacttttgtgggcaatcaaccttttgggatctgtcgatgtgtgcttccaaagtttgggttccatgccatgcctgtcataactcactttgatgtacaaatgataaatggttatgccgtggttttgattctttttttttttgttctatgttgcaggcatggttagctactatctcattggctctatgcaaggtttgtgttttatgggcaagaatgattctcttatactgcttgggatgtttatttgcattcttttaagctactgtgctcgctttggttatcctgatcatcagacgcactcatttctacttcattttataggcttttgaccttcttgacatgttaaagaaggaagaagaaatgcttccggcagtaaaagaaaggaaagcgaaggtaaaacaaatgaataaagtttgccaatttctcgtcaatagtatctttggttgatcctttccagtatcatattggccttttaacttttcttctataaccgttctgtacatttctggttgtgtttttactgatacaattattgaacttcgctttgccttgagcttatgttgtagtagagcttaccttcaccaagtagaccatgaccaagtaggtagctggatagttgtatacagtaattctgtttgaaaaaaattatacaccggattctgagttaggagatacaattaaattaattgtcataatatgataataacttgccattgcaagtatttcatcacacttctctctctctctctctctctctcagtgtctgcagagtgctgagtgttttgttgttactacatgcaagtaatattagatgtttgattttgttttcatgatccttttatagcactcgatggtagatgttctaccgtaagaaaaaaacaattagatttttttttatctttgcttcctttgtgttgcatgtctgtttcaataaattctgcacttacatggaggtttcctttagtaatgaaataatttcctgctcatgatgttttaggatggtaatgcatttgctcgtgaaatgcttgatgaacgtacaaaaagggctgaagcatggcaccataatgctgccaaccgtgcaccatactccaaaccagctgatccaatcacttgtgcaacatttgctcaagatgtcattgaaggtagagcaagtgtttcacaagcacatgagcacaaacaccagccgctgatatttggccctgcaagtcttgttggtggaggactaaccagtgaaagagagagaatggcagcacaagtttttcagccaagttataggtatgctttaaaatactactacatacctggctgaaactgcactgcttctttttattgtgatggtgaacttcggttatggcagaatgtggaggggcattatttgtggcaacctttaatgcatcatactagtcatactttgatatatttgtaggaactttgacctcctttttcgttgagcattactcgatgagcaaattatttcttggtaaatttgtaaagtggtcctttacattgtatttgcttcaccacattagtatgtgaccatgtttattcaatcgtaggtgtttccttgtcctgttgttgcatgttctgccataagtccgtgacaaattcgtggtttacactgttgatatcattcatttttttcatgctggaaaggcaccatgtttaaatttgctattcagtgcaatactagattcactgacaataaactgttgtcttgtactctgttgtgactacgaacacttggtgcaatcgtatagatgctgagatagtgattcgtaggtgtgaccttatgtttagtcataatctatgaaaaattccaagaaatgatactattctgctgcaatttctacatttgctcataaaaaacattagatttcccctgcagcaattaagtgttgagctatagatcatctctattaaagtgatcttgcattgttcagtcctaaaagttagtgaaaatatgcatatgagactatcctttgatccaataattcttaggttgccaacgatgagcatagaagaagctggcttacgtgagatgaaaatgatggagaaatggcaagaaagaactgccaagatgattcaagaatcaaactccgcatggcacaaggatggcagtcggtcagcccaagaggacgaggacgccgaagaggagaaagcgagaggatgggatgactggaaggacgataaccctcgtggtgcaggcaacaagaagctcactccctgtggctaaattatatgctatggcaattctattgaacttacatctgaaactgaagctcgtgtaaaaatatgtggtttttactaactttccttactgcggcatttgttgattgctgagtaataatgtgttccatatgtatattataattgtgcatggtttccttctgccaatatatgggcaaccaagtaatgccagaaaagctgatttgagaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0141000, RefSeq:Os11g0141000