Os11g0163600

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Annotated Information

Function

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Expression

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Evolution

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Structured Information

Gene Name

Os11g0163600

Description

Tubby family protein

Version

NM_001072364.1 GI:115484340 GeneID:4349867

Length

4182 bp

Definition

Oryza sativa Japonica Group Os11g0163600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:3081675..3085856

Sequence Coding Region

3082975..3083041,3084549..3084681,3084780..3085533

Expression

GEO Profiles:Os11g0163600

Genome Context

<gbrowseImage1> name=NC_008404:3081675..3085856 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:3081675..3085856 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagtgtttcattaggagggataagtctacgcagacctactatttgtacctctctcttggctctgctgtgcttgttgacaatggcaaattccttctatcagcaaaaagaaactggcatgcaacatgtacagaatatgtgatatctatgaatgctaacaatttatctaggtctaccaacacaaacattggaaaattgaggtcaaacttccttggcacaaagtttgtaatatatgatacccacactccgtacaatgcaactagtgattcacagtcagggaaaacaagccgaagattctccaacaagggaacagcaaagcatccctgcagcacatatagcatagcaaacatctcatatgagctaaacgtctttggaactcggggtcctaggcggatgtgctgtttaatgcactccatccctgcctcatctcttgaggctggtgggactgttcctagccagccggatagcatccttgcccattccctcaatgaatcctcctttaggagtgtctccttttcgaaatcgtccgttatggaccattccatgcatttcagcagtgctcagttctctgacatctcaattggagatggcccaaggattgggggccgggtattgagcgatgatgaggagtgcaaggagacacctttgattctccaaaacaaggctccaagatggcatgagcagctacagtgctggtgcttaaacttccggggccgggtaactgttgcttctgtcaagaacttccagctcatcgcagccacgcagcctgctgcgggagccccaactccatcacagcctgttccaccacccccaccagagcatgataaggtcatactgcaattcgggaaggttgccaaggacatgttcaccatggattaccactacccgctctcagccttccaggcatttgctatctccctgagtagtttcgacaccaagctggcctgcgaatag</cdnaseq>

Protein Sequence

<aaseq>MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCT EYVISMNANNLSRSTNTNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRFSNK GTAKHPCSTYSIANISYELNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAH SLNESSFRSVSFSKSSVMDHSMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLIL QNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIAATQPAAGAPTPSQPVPPPPPEHDK VILQFGKVAKDMFTMDYHYPLSAFQAFAISLSSFDTKLACE</aaseq>

Gene Sequence

<dnaseqindica>1301..1367#2875..3007#3106..3859#gtctcctctcacaccacacgcctcgcatcgcatccccacctccgccgatcccgccgtctccggccatctccgccgccggcaaccaccaccacctcctcctcttcccctctcccccttccgcccaattggttgccccgaccaaaccctacgcgcggaagggctcgctcgctcgatccggtgcgggcagcgcgcgcgcggggctcgacgcgggcggcgacggggggcgggctcgatccggcggagcagtgggcgctctcttccacgatgcgtctaccctcttcgcgcgagcacgacaaggtttgcagtagcagagaattttgtttcgtgtttatcgattgggcatcttcggcgcgggagaccggggagtaggttggtaggtaggcttgccgaatccagcattttcgcgtgccccctcgtagcttccgccctgctactgctgctgcaatcggtgtggagagagataattgggggcattgtgacctgcattcccgcagggcaggggcaacgtcgccatcgtgcgcggcaccgtcgtctagtctcccatctttttcaagaaagaataatcgaagattaatcttgaccaattcaattcatttgtgctgcaggttctttttgcggggtcaacaataatgaggagaatttgagttggtctggaattactctgggatgttatcattggcgaaaagtatagatcccttttggtagctgaggagagatctcaattttttcagagagtagatgtcgtttcgcagcatcgtgcgcgatgtgagggatggatttgggagcctatcgaggaggggatttgaggtcaggattctggggcatcgcagggggaagtctcatggtgctgtccatgagttgcatgacccggtgcctgtaatccagagcagctgctgggctagcttgcctccggaattgcttcgtgatatcattgagaggttggaagaaagtgaggctacatggccttctaggaagcatgtggttgcttgtgcgggtgtctgcagaacatggagggagatgtgtaaagagatcgtcaagaatccagagttgtgtgggaagatcaccttccctatttctctgaggcaggtgatcatgcaaattgtgttgtttttagttttatatcctttacaagcaatatcagttcgtccatgttaggtgcttgtccttcaacatattgttggaatttcgaaacacaaaaatagaaagaacacccacatattgcaggattaccgtttgcttatatgctaataagttcatgttattccgcttctatgtacagcctgggccacgagatggaactatgcagtgtttcattaggagggataagtctacgcagacctactatttgtacctctctcttggctctggtatgttacttgttacatctcatatgctttatgttgtatgcgcctatgtaccagagcccatatttgcttctgcataagaagattcatatgtagttgtatatacttgtgagctgctgaatgagtgcatatattctgccaaaactatgcttgtattgcatagcaaatgaagagctgttctttcttatagcccttgcatagggtagatggtgccttgggatggtaattggtgccatgtttatcatttgacatgaatatgctagaaacatattattccttatttgtcattgtctatcttccacaatcatgcacaagcgaacttgtgaacagatcattcagcattccttggctttcatacagttaagttaggttctttataactacaattctgtaataagttgtctcatttttgtaaccaaaataataggatacagcacacaatagttgttatgtataattaagtgctattttttagtattgtatacctctgtcatgcacttgttctactgttttacctgacctataccacttggtatttactacttgacttgacaatctggaaaaaaagttgacctgatccatgataatgtcaattaagcaacagtacactaataaaatatattcccgttgttatgcacaagtaggttgttctcttgagattgtttgcattcgaaccacttcaatagttcaatgacacccatatggtgcgagtatattcacaagtgggactggttctgtgcaattgtaatttgagctgctgtgtcctttgcttgattggaattgcatgctatctgtttgctgtgtccatgtgggtgtgcatctgtcattgttggtttccaattataggtaacatagtgcacatcagatacaaagggcctcaaggctatactgttgtgcacgcatgcatcgtgagaatgaggcgatgagctcagcgtgcttgcattgagctcctagctgcacaagctctgccatcggccggcacgggcctcaaagtcgaccactgctagccctttgagccctgttgtgcgaactcaatcctcttctgttgccttgcgtccgcctgctagtaacatcaagtgagcttagctaattgccgactagatatattaggaaatgacgacgaaacaaaataggagggaatctcgggatgagatgtatggaaagacatttactaattttatgtgtgtaaatgcaagacatatttgagctgctttgatgtcggcatatgttcttaacttctcataatatttttatgcacaacgaattaatattatatggtggaaaccgttgtttgtttgttatttttaatcgtcttatgagttgtaccgttttaatatgcaagcattgtcattcttttacttcagtatgtcttgtgtgtctgacccacctaatttttgcgcgtgctccgtcactggtgcacatatatgttttgtttccttgctggaatacttttagtatttcagtaccagcatttactaattttagatgttttgatttcccttttctgcagctgtgcttgttgacaatggcaaattccttctatcagcaaaaagaaactggcatgcaacatgtacagaatatgtgatatctatgaatgctaacaatttatctaggtctaccaacacaaacattggaaaattgaggtattaacccgaagaaactacaaccttatttcagaacttaccccattttaatctaaaaattattgctgctgctaatatgtctccattttgaattgtaggtcaaacttccttggcacaaagtttgtaatatatgatacccacactccgtacaatgcaactagtgattcacagtcagggaaaacaagccgaagattctccaacaagggaacagcaaagcatccctgcagcacatatagcatagcaaacatctcatatgagctaaacgtctttggaactcggggtcctaggcggatgtgctgtttaatgcactccatccctgcctcatctcttgaggctggtgggactgttcctagccagccggatagcatccttgcccattccctcaatgaatcctcctttaggagtgtctccttttcgaaatcgtccgttatggaccattccatgcatttcagcagtgctcagttctctgacatctcaattggagatggcccaaggattgggggccgggtattgagcgatgatgaggagtgcaaggagacacctttgattctccaaaacaaggctccaagatggcatgagcagctacagtgctggtgcttaaacttccggggccgggtaactgttgcttctgtcaagaacttccagctcatcgcagccacgcagcctgctgcgggagccccaactccatcacagcctgttccaccacccccaccagagcatgataaggtcatactgcaattcgggaaggttgccaaggacatgttcaccatggattaccactacccgctctcagccttccaggcatttgctatctccctgagtagtttcgacaccaagctggcctgcgaatagaacttccaggcaggccagaaacatcatggatgcttcttatttgacgccctgagggcatgcccctggatggagctgaccatccccaagtttagcctgggacgccgttctgttgtatgttactgatgatgtgttaactcagaaacacccaagcaacaaaaggcaaattgttattttagcatttagcttatttattctgattttgctttgtaattgaatgttatctttatttctttttgacccatagctctctctataacaggtattctgtatgtgcatcggataattttcgcagaattcatttgactgttctccagtgatttatt</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0163600, RefSeq:Os11g0163600