Os11g0636900
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os11g0636900 |
|---|---|
| Description |
U2 snRNP auxilliary factor, large subunit, splicing factor family protein |
| Version |
NM_001074862.1 GI:115486372 GeneID:4350981 |
| Length |
4730 bp |
| Definition |
Oryza sativa Japonica Group Os11g0636900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 11:26991349..26996078 |
| Sequence Coding Region |
26991557..26991694,26991793..26991860,26992184..26992325,26992418..26993038,26993130..26993231 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008404:26991349..26996078 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008404:26991349..26996078 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggagcacgaggagcagccctacgagggcaacgggaacggcggcgacccggcccccgcctccgcgtacgctgagtaccctgcgcccgaggggtccccgcccgccgccgccgccaagcccaccggcttctccgatggcgccaccgacggcggccgttctcagcacgagacacagccacatgatggcaggtcctcaaagtctagagagagggaaagagaacgggacaaggacaaggaacgcgacagagaccgtgatagagaccgaagggaccgcgaccgtggtgacaaggacagggaccgtgatcgccacagggagcaccgcgatagaagcgaaagaagggaacaccacgatcgtgaacgttctgatgaccgtgatcgacgccggggccatgattctgaaaggagaagagaccgtgacagagatggtcaccgcaggcatcgatctcgctcccgctccccttcaaagggtcgtgatcgcagatctagatctcgctcacgctctcgatctagcaagcgcgtgagtggatttgaccagggaccacaagcagccattcctgcgcttgctgctggagcagccccaggtcaggtacctgttgtggcccctgctatttctgggatgcttccgaacatgttcaatttgactcaaaccccgttcactccgcttgttattcagccacaagctatgacacaacaggctactcgacatgctaggcgtgtttatgttggtggacttcctccaactgctaatgagcatactgttgctgtatacttcaatcaagttatggctgctgttggtggaaatacagctggtccaggtgatgctgttcttaatgtctacataaaccatgataagaaatttgcatttgtggagatgaggtctgtggaggaagcaagcaatgcaatggccttggatggtataatgtttgagggagcacctgtgaaggttagaaggccaacagactataatccttccctagcagctgcattgggtccaagccagccaaaccccaacctcaatcttgctgctgttggcttaacacctggctcagctggaggtttagaaggtcctgaccgcatttttgtgggtgggctgccctattacttcacagaagctcaagtcagggagttgctcgaatcctttggacctctgcgtggttttgatcttgtgaaggacagagaaactggaaactcgaagggctatgctttctgtgtataccaggatcttaatgtcacggacattgcctgtgctgctcttaatggtatcaagatgggagacaagaccctcactgttaggcgagctaaccaaggagcttctcaacctaggccagagcaagaaagcatgctcctgcatgtacaacaacaggcgcaaatgcagaaactcatgttccaagttggagggggagcactgcctacaaaggtggtatgcctgacccaagtggtttcaccagatgaactgagggatgatgaggagtatgaggacatcgtgcaagacatgagggaagaagggtgcagatacggtaacctggtgaaagttgtgatcccgcgacctgatcccagcggtgctcctgttgctggagttgggagggtgtttttggaatttgcagatgtagagagctcgaccaaggcgaagaatgggatgcacgggaggaagtttgccaacaaccaggtggtggctgtcttctaccctgaggacaagttcgctgaagggcaatacgacggttga</cdnaseq> |
| Protein Sequence |
<aaseq>MAEHEEQPYEGNGNGGDPAPASAYAEYPAPEGSPPAAAAKPTGF SDGATDGGRSQHETQPHDGRSSKSRERERERDKDKERDRDRDRDRRDRDRGDKDRDRD RHREHRDRSERREHHDRERSDDRDRRRGHDSERRRDRDRDGHRRHRSRSRSPSKGRDR RSRSRSRSRSSKRVSGFDQGPQAAIPALAAGAAPGQVPVVAPAISGMLPNMFNLTQTP FTPLVIQPQAMTQQATRHARRVYVGGLPPTANEHTVAVYFNQVMAAVGGNTAGPGDAV LNVYINHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQ PNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKD RETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESMLL HVQQQAQMQKLMFQVGGGALPTKVVCLTQVVSPDELRDDEEYEDIVQDMREEGCRYGN LVKVVIPRPDPSGAPVAGVGRVFLEFADVESSTKAKNGMHGRKFANNQVVAVFYPEDK FAEGQYDG</aaseq> |
| Gene Sequence |
<dnaseqindica>4385..4522#4219..4286#3754..3895#3041..3661#2848..2949#2668..2738#1564..1634#1065..1172#716..954#83..247#acctcgcgcccgccgcctccaccgctcgagccaccgaaccctagaaatcccgccgccgccgcccgcccactccgtcgcgccgatggcggagcacgaggagcagccctacgagggcaacgggaacggcggcgacccggcccccgcctccgcgtacgctgagtaccctgcgcccgaggggtccccgcccgccgccgccgccaagcccaccggcttctccgatggcgccaccgacggcggccgttctcaggtgcgcgcgtcgcggatctgtagggggggaatttggcccatgttttgggatggggggcggtttggttttgggattgtttcatgggttgggtgcaaggggatttcatctggttgcctgagatttagggatttaggtggtttactttgcttgcaatgttatgctctccaaatcgatggaactattaggttgttaggttgattgtaattgctttgtgctgttttaatttcctctggagaccacgattcaaataaaacatagaactaggaaatttttaggcgattttcggattagatctgtttgaatttaattgttgtgcaaatttcaacattcaccttatgctgattgtatcaccttggactcttagagagtagtttctggtcgttgacagcttattggggctaaacaataattgaatcttctcttttgaagataagaggactgactgataactcttgttcttttattcagcacgagacacagccacatgatggcaggtcctcaaagtctagagagagggaaagagaacgggacaaggacaaggaacgcgacagagaccgtgatagagaccgaagggaccgcgaccgtggtgacaaggacagggaccgtgatcgccacagggagcaccgcgatagaagcgaaagaagggaacaccacgatcgtgaacgttctgatgaccgtgatcgacgccggggccatgattctgaaaggtacaggttatttttccgtatgttaatggatatgctatgattcctctgccatttgtttgcttcatgccacgttttattgtgggaatctgatttacactttattaatgcaggagaagagaccgtgacagagatggtcaccgcaggcatcgatctcgctcccgctccccttcaaagggtcgtgatcgcagatctagatctcgctcacgctctcgatctaggtatgtgattgaatgcccttgtatgcttattatatgcattggttcctgatgttgatgatgggccaagtttgcctgttcttattagcttacaaaagtcacatgttcttttgatacctcttaagtcttaacagtgatgcaattttcagaatgttagtaacttagtatttcttcttatcttcaaaagattgacactcttaaaacatgcagtgaactgtgtttcttttcaattttttttcaatggtacattcatatgtctttactagtttacttaatgtaatccatttatgcgcttgattttgttctttgtcatgtaccttcttaggtggctttaattctatttgcttatgtaattcttttggtctagttattaatttggcttttgttaaaacagcaagcgcgtgagtggatttgaccagggaccacaagcagccattcctgcgcttgctgctggagcagccccaggtatgttagcacccaatataatttgagagtttattttgctctgctgaatttatctatttatacttgaaactaccacaaattgctgtagctttatcattaacttgtctacatcacaaaacataaggctcaagtaacattaatgcaaagaccaagaaagagttattagcacctccttgtttggatcgccccaataaatacaatacatgcacccaatgagatgagagatcttgaagatggatgattttaaaaaaatggttttagggtagggagaggtgctagttaattgcatgcatacgtgccctgaattatgaagcctcggaaaaaaaattagttgctccaatattttgggatggagggagtgacaaccaagttttttcaactagttgaccttgtaactcctttggtcctttttttattttcagcaatgctagcacttataaattacgaacatctctagttcccaatgaagtacatattcaaaatttctatatttgttttgcctgagggtcgagaaaagactatttactggtctctttctgacactgctgtcttaccactggatgccttgaaggcatggtaatcattattttgtacttatatagttgatatttcatgtagaaaattaattttattttatcataactggtttggaactaagtgattttctctttttttgttggtgtttgtttgttttgtgtgcatatcggtaggaaagcaatcttgggccactttgtccaactgctgcaatgggagacactgtagcttaattgtacgaggaggaaacaatctggtttgatatcctgttcgtcttccaatagcagctagtattacattatgttagtttaataattgttaacttcagtcctcactgggcaggcagatgccatccattcatctatgttgaattttgaaaaacaggacctatattagattatcagtagtagttgggttgttctaaatggttttgttaatgatagatcacaagtaaaaacattgattatttttctgatgaattctttgctggtatttgcaggtcaggtacctgttgtggcccctgctatttctgggatgcttccgaacatgttcaatttgactcaaaccccggtgagtattatgttgttttgaactttaggaatgaaccccctgtgagctatgatacttcagttatttgttataaagacacagtcctaattttctcttgtttttgtatcagttcactccgcttgttattcagccacaagctatgacacaacaggctactcgacatgctaggcgtgtttatgttggtggacttcctccaactgctaatgagcatgtaagaaatcatcctcttttctccacatttctcactttctgtggcttgtacttttgtgtgttttatactgatgtctggtcttcttttacagactgttgctgtatacttcaatcaagttatggctgctgttggtggaaatacagctggtccaggtgatgctgttcttaatgtctacataaaccatgataagaaatttgcatttgtggagatgaggtctgtggaggaagcaagcaatgcaatggccttggatggtataatgtttgagggagcacctgtgaaggttagaaggccaacagactataatccttccctagcagctgcattgggtccaagccagccaaaccccaacctcaatcttgctgctgttggcttaacacctggctcagctggaggtttagaaggtcctgaccgcatttttgtgggtgggctgccctattacttcacagaagctcaagtcagggagttgctcgaatcctttggacctctgcgtggttttgatcttgtgaaggacagagaaactggaaactcgaagggctatgctttctgtgtataccaggatcttaatgtcacggacattgcctgtgctgctcttaatggtatcaagatgggagacaagaccctcactgttaggcgagctaaccaaggagcttctcaacctaggccagagcaagaaagcatgctcctgcatgtacaacaacaggcgcaaatgcaggtatgtgctgtgttcttaaacacattattttacggagcacaaatcagtttaaacactagccttccaatttctgactgttgtttcttggacagaaactcatgttccaagttggagggggagcactgcctacaaaggtggtatgcctgacccaagtggtttcaccagatgaactgagggatgatgaggagtatgaggacatcgtgcaagacatgagggaagaagggtgcagatacggtaagcaacaatgaactcgcacattctcgcttcctgtgcaccaatcactctgattcagtttcataattgatttttgcctttgctcagttactgaactagtttccttttgtgtgtttgtctttttgtgtgtcttttttgtagtcccacatagtgccattgcagagtcttttatagtccgaccttatgcaatattggcagtcgggcatagcctacagaagacacacaattccaattttactttgctttatcagctttatgattatgatataatatgatgccatgcttttttctatttgtctatgttctcactgacgcttgttcaggtaacctggtgaaagttgtgatcccgcgacctgatcccagcggtgctcctgttgctggagttgggagggtgagtgctcctcttgctcttttgccaatttaatacaaataataacatcatgggttatgaattttgaaactgttctgaagcatgagagtgcattgcaggtgtttttggaatttgcagatgtagagagctcgaccaaggcgaagaatgggatgcacgggaggaagtttgccaacaaccaggtggtggctgtcttctaccctgaggacaagttcgctgaagggcaatacgacggttgaacatcgaagtcgccctcttattgtttctaacgcctataaggcggaatctatttacgtttaccttagttttgcaatttttacatctagttttttttttctgtgttagttgaaattttattagtagtccagagattggtgcagaatcatgtgtactttgggtatgttcttatggttctgacttgaaaagcaatagtggctggttgtgcct</dnaseqindica> |
| External Link(s) |
