Os11g0658800
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os11g0658800 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001074931.1 GI:115486510 GeneID:4351055 |
| Length |
3820 bp |
| Definition |
Oryza sativa Japonica Group Os11g0658800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 11:28262820..28266639 |
| Sequence Coding Region |
28263233..28263903,28264309..28264379,28264478..28264652,28264732..28264852,28265759..28266055 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008404:28262820..28266639 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008404:28262820..28266639 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaagagaagactggtggtcgtagcattggtgttgctggccgttgttgagttggttcatggcgatgggtggcgatgggcgccggggtcgcggcctcacagcgtgaccatcaccgagttcggcgccgtcggcgatggcaagacgctcaacaccctgcccttccagaacgccgtcttctacgctcggtccttcgccgacaagggcggcgcgcagctgtacgtgcccaagggacggtggctcactggcagcttcaacctcaccagccacctcaccctcttcctcgaggaagaggccgtcatcatcggcacaaaggatccatcacagtggccgattgtggaacctttgccatcttatgggcaaggattagatcttccaggtcctagacaccgcagtttaataaatggatataatttaagtgatgttgtcattactgggaataatggagttattgatggtcagggctcggtatggtgggattggcttcactcccatgagcttaaccatagccgacctcatattgtggagtttctgcattccgaagaagttgtaatctcaaacttaacatttttaaattctccagcctggagcatacatccagtgtattgcagcaatgtaaaggtccacaatgtcacaatcaagacctcattggatgctccactcactgatggcatagttccagattcatgttccaacgtgtgcattgaggatagcagcattagtgttggtcatgatgccatatcactcaaaagcgggtgggacaattacggaatttcttttggaaggccaacctcagacattcatatcagtagggttgatctgcaagcatcgtctggagctgctcttgcaattggtagtgaaatgtctggtggaatttcagatattcatgttgatcacattcgaatcggcagttccagtaaaggcatctccttcaggactactccgggacgtggaggttacatagcggaagttgtcgtcgcagatgtagtaatggatagtgtccatctcgccattgagtttaccggtaactggtcaagccacccagatgaccattttgatccatcttttcttccggtgatagatcaaatcacccttaagaatatggaggggacaaacatctctgttgctggagttctatcaggaatcgagggtgatccatttagtgctatatgcctttctaatctcaatttctctatagccgatttggctccttccagtgcctggacttgttcaaatgtgcatggatattctgaattagtattccccaagccttgctcagaactccatgacacatctacaaactcctccatctgtttctccctctctagttacagtgccctcgcagtactataa</cdnaseq> |
| Protein Sequence |
<aaseq>MKRRLVVVALVLLAVVELVHGDGWRWAPGSRPHSVTITEFGAVG DGKTLNTLPFQNAVFYARSFADKGGAQLYVPKGRWLTGSFNLTSHLTLFLEEEAVIIG TKDPSQWPIVEPLPSYGQGLDLPGPRHRSLINGYNLSDVVITGNNGVIDGQGSVWWDW LHSHELNHSRPHIVEFLHSEEVVISNLTFLNSPAWSIHPVYCSNVKVHNVTIKTSLDA PLTDGIVPDSCSNVCIEDSSISVGHDAISLKSGWDNYGISFGRPTSDIHISRVDLQAS SGAALAIGSEMSGGISDIHVDHIRIGSSSKGISFRTTPGRGGYIAEVVVADVVMDSVH LAIEFTGNWSSHPDDHFDPSFLPVIDQITLKNMEGTNISVAGVLSGIEGDPFSAICLS NLNFSIADLAPSSAWTCSNVHGYSELVFPKPCSELHDTSTNSSICFSLSSYSALAVL</aaseq> |
| Gene Sequence |
<dnaseqindica>2737..3407#2261..2331#1988..2162#1788..1908#585..881#218..232#ttctcttctctcttctctctgctgctgctgcggcgctgcagcttctcctcctcttcttccgccgcggattttggccggaatttcgccggaaaaatctggttttttcaagtctcttctttgcctgcggcggaggcgcgtggatttttttcttctctgctgcttcgtcttctcccatccctctccctctcttgccgcgaggaggggagagggggacttgatgaagagaagactggtaatatgctgcgacgatttcatctgttttttctgtgatgggttttggttgcttcttgtttttccgagaaaagaggggggttttgatgttgctgctaatcttcttttttctatccttatatgcgtgactgatgggtttgggttttgattctccatgtgatctgtaaccaattggggatctttctctcagagaaaatggtatatattttctttgcttctggttgatagtttgttttttttaagattgtcgcgagttgtattacttccgaattttggaggttttgatctggaaggaaatgttgtgatttgttgcccaatggttgctaattgttgttcatggcaatggcgttcaggtggtcgtagcattggtgttgctggccgttgttgagttggttcatggcgatgggtggcgatgggcgccggggtcgcggcctcacagcgtgaccatcaccgagttcggcgccgtcggcgatggcaagacgctcaacaccctgcccttccagaacgccgtcttctacgctcggtccttcgccgacaagggcggcgcgcagctgtacgtgcccaagggacggtggctcactggcagcttcaacctcaccagccacctcaccctcttcctcgaggaagaggccgtcatcatcggcacaaaggtaattgtgaatggatcgataaatggatggcactaattttggctacaacttttgttcctgttcatggatttgttaaggtagtaggatttgataaggtagtagtagttacagattgtacagattgatgtggtttgcgttcgcgattcgggatgggtagtaggattatatgttgtgagatgtaggttctggtggcatgaatgcgaggatatgcacatcattttcagctgcatttgcattgaattgttagtggttaggataggtatatcgccacgatcagatcatcttagtttgtttggatatggttggtggacatacctgatggagtagtgattttgacatgtgtaaggtgaggtcacaagccatgggggaaggctaattttggggtctggttcatgttctttgtagttgctttggatggataggaggaaaaatcttgtaaagatatcccgatcagtagggttcaagttaggtctggcttttagttgtttcgttccaaaattcatgcagacatggagtatttggaaggtgaaacttagctattggtgtcaggggcagtagataagaagagacaatttccttttgcattgttttgaagtcaaggtgtgctctttaattatatatgaacaaaacatggacacactgcttcaatgcagccacatggattgcgattgcttatctgttatatataaattcattgcatgtcgcctgaccatattttttaacttgtgcataattcaatagaaaagaatggcatttttcgttttacttataatgtatttcagatggtagaaaacaatgccctgttcttatgttaaggtttcatcgttgttttgttcttatgtcaaggtttcttcgtctttaaatattaagaatgcctaattctttatgcaatttttctcactgtaggatccatcacagtggccgattgtggaacctttgccatcttatgggcaaggattagatcttccaggtcctagacaccgcagtttaataaatggatataatttaagtgatgttgtcattactggtaacttcttttctgcttcagatttgagctgcagtatacttgttttgcagtttaataatagttccatcacttatttcagggaataatggagttattgatggtcagggctcggtatggtgggattggcttcactcccatgagcttaaccatagccgacctcatattgtggagtttctgcattccgaagaagttgtaatctcaaacttaacatttttaaattctccagcctggagcatacatccagtgtattgcaggtgaattggcatttattaacttgttacatgaggtgtgatttgggggatctatttgcatgtgcactaatgctgtaatgcatattgttttttttccccagcaatgtaaaggtccacaatgtcacaatcaagacctcattggatgctccactcactgatggcatagttccaggtatgattgtatctactgctgatgtattgtttcatattcatacattgtaatttgttgatgctatgaagtggtagaggcaatatgagaaaaccaacagacctttcaacttccgtggtgcgcttgccaatttgcaaactaggagcacatgctcaaaagaaagattgagatctcatagaaacatgagttgtcttaaactgcatgcacaatgttctgacttctgctatcaaatcatgggtttaagtagtattattgttcaaaccatttttgttttacggaaaagatccttccagagccatgaactatataatctttattcttttttccatgattagattgatatctactactttactgccatgggaatattttctttataatttactaatggccatacttttactccagattcatgttccaacgtgtgcattgaggatagcagcattagtgttggtcatgatgccatatcactcaaaagcgggtgggacaattacggaatttcttttggaaggccaacctcagacattcatatcagtagggttgatctgcaagcatcgtctggagctgctcttgcaattggtagtgaaatgtctggtggaatttcagatattcatgttgatcacattcgaatcggcagttccagtaaaggcatctccttcaggactactccgggacgtggaggttacatagcggaagttgtcgtcgcagatgtagtaatggatagtgtccatctcgccattgagtttaccggtaactggtcaagccacccagatgaccattttgatccatcttttcttccggtgatagatcaaatcacccttaagaatatggaggggacaaacatctctgttgctggagttctatcaggaatcgagggtgatccatttagtgctatatgcctttctaatctcaatttctctatagccgatttggctccttccagtgcctggacttgttcaaatgtgcatggatattctgaattagtattccccaagccttgctcagaactccatgacacatctacaaactcctccatctgtttctccctctctagttacagtgccctcgcagtactataaatatacagagtaatcttgtgtccatccttcccctgtcttgttccagtccttgtacaattcagaaattgagcatccatcaccatctttccaattctttaccaccaataaattcatcacaagaatgaaacagtacccctcttatggtcctaaggctcagattataagctgcataatgatcttgaggaggaagaatctaagtggggttgtggatagctaggtgcatgcctgtacagctacatttcttcattcaatctgtaagaaaaaaaatttcttttttggtagggttgagtgcaggatattttcttcatacaattgtcatttggttataaattatcacatcatgattaaattatctctgtatattctatctctgtgagcaacattctaatagagcagatcacatgttatcctgg</dnaseqindica> |
| External Link(s) |
