Os07g0149900

From RiceWiki
Revision as of 20:31, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0149900

Description

X8 domain containing protein

Version

NM_001065431.1 GI:115470594 GeneID:4342405

Length

3305 bp

Definition

Oryza sativa Japonica Group Os07g0149900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:2627908..2631212

Sequence Coding Region

2628077..2628176,2628268..2628298,2628399..2628657

Expression

GEO Profiles:Os07g0149900

Genome Context

<gbrowseImage1> name=NC_008400:2627908..2631212 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:2627908..2631212 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgttcgtggacggcgtgacgtggtgcgtggcgcggccgggggtgtcacaggaggacctccagaacgcgctggactgggcgtgcggccagggcggcgcggactgcaccccgctgcaacccggtggtcggtgctaccagccggacaccctcctctcccacgcctcctacgccttcaacatcttctaccagcagaacggcaactccgacatcgcctgcaacttcggtggcgccggaaccatcatcaagagaaatccaagttttggatcatgcaagttcctggcatccgagacatctgctgcatcagcactgactcgaggaagcatgtggatgatcttcgcagctgcgtctatgatgtttcttcatctgagagttttccaatccgtgtga</cdnaseq>

Protein Sequence

<aaseq>MTFVDGVTWCVARPGVSQEDLQNALDWACGQGGADCTPLQPGGR CYQPDTLLSHASYAFNIFYQQNGNSDIACNFGGAGTIIKRNPSFGSCKFLASETSAAS ALTRGSMWMIFAAASMMFLHLRVFQSV</aaseq>

Gene Sequence

<dnaseqindica>3037..3136#2915..2945#2556..2814#tgattcatgtaaagattgacagtgataaaagcgtggtttatgaggttccatgccaatcagataactggtgctgagttcttgttgcataacatgttctgtagcatcatcatatattgatagtacaaccttgacgatggacactgaacactacctgatggtacaagtgagaaaactacaaagatatgaggcatgttatgcagacgacccagcaattattttgttgatatgcttataaggtaccagtacaagcgagaaaactacagagacatgaggcatgttatgcggacgacccccaattattgtgttgatatgcttataaggtaccaaactgtggcttttgtctgggatccatttctttccttttaattatcataccgaattttcaaaactgttttgattctgaatacatacatctttgaaataagccttataaaattgcctgagttttatcaaactttattctgggtgttccacttatatcggacctgatcctttttttaaagaacatatcaggcatgattctagttacaaatttaattccatacaaagcactactgtagtttattgcttggcttccctttatgtatattggtaagcaataaatgtttccactcattggctaccgatatgctatagaactggatgctgaaaagttgcactgcattaaactataagatctttcttttcgtttctttcatacaacatcaaactgtctaaagcttccagagcaaagttaagatacaactttcatcatgaaaacactaaagtttttatcttaatattatgcattggtgttaaccttttaatggatgttgcattgttccatatgtttctactttctactcatggggattactgttgacatttgtgtgcaccacttccatttatcctctttttggaaactgtttccagcaccatcccaaattcactatgtaaaatgtcttactagtgcgttttgttgcattctgtacgtatgccatttcagttttgataagttattttacttaacctagtttttttaatggaatcagcacaagattgtgctatttcattgaacaaggggtaaaaaagtacaggccctaggggcactggacctagttttttcaagatctgattttctttatcaggttctctcctgtattgaacccttgtcccaggttaaaacatgcagcattctccatgtaatcttcaggaaacctcttcattaggcttcactctttacaaagtgaatcaaggttcttcccttaatcctcaaggaaagcttttctcattaagccccgacatatgctaccatgaaacaacaaagaaaagaaattagaacatgcacttggcccctttcaatcttatggaatctattgcctaagtttctttttgttcttttagaaataatgtccatgcttgcacatcttgaaggcaaaaggaatctcatggtttcctggccttcaagtcattctcatccatattattctattatgttcataaaggtccctgcattggttgcacaatccaagaaccagcagctgctggtataatcatttataacatgttctgctccaggcattacaataactgcaacataaattaatagacgatcggcatggcgattctcatcatggtaaagctcactcatttatcaattcaatgacagcatataaaacgtcggtagggtctgcagatattacaattttgtaagaggaattatggtaaagtcatgtttgtgtagattcgaaccaaattagtcaaatggtgaccatatggccataggaactgggcgggtggctctctgatagctacaagatgcatttctctctgtacattggaaatatgggatctttgtgccacttttcaagccatctcctccctgctatggccataaatatgcaccacggtggggacttcttttagttcgtgtcttgcttgcttagtaattcgagtgaaaccctgaccctttcccatgaacaagacaagctttcctgttgatacagctgcccttcgttcagacactcaatatattccctaggccctcacattgaggagagagtggtagatagacaaagagggagagagctgagtgaaaagcagtgactgctttcagttcggtttcaaccatgaagagaaagcagttgatcatgcacagccttttgattctgggatggttcataggtgggtaactgcactgctcttgttctttgcccgtgtcttctccacaaatatttctcatactaagtatttgaatgagcttgctttgatctgttagtagtaccactgcaaactttatatgcataatctcagaactagctgtatctatgaacagactgttttgtttgttcacgtttagctgtaaatgttcagtcaatccgatcatcacaatgttctcactgactgttttgtttgttcacgtttagctgtaaatgttcagtcaatccgatcatcacaatgttctcactctgtcatttcctctgtgatcagtctcagcagcaggcgcacgcgtcgcgccacaggagaaggcggagtccgcgacgccgatcccgacgctgtcgccaccggaggggaacatgacgttcgtggacggcgtgacgtggtgcgtggcgcggccgggggtgtcacaggaggacctccagaacgcgctggactgggcgtgcggccagggcggcgcggactgcaccccgctgcaacccggtggtcggtgctaccagccggacaccctcctctcccacgcctcctacgccttcaacatcttctaccagcagaacggcaactccgacatcgcctgcaacttcggtggcgccggaaccatcatcaagagaaatccaagtaacacaacaacagacagtttgtttacatttttacaattcagcattgttcagtgacatctgtaattgtaatttacatctgttctttgtgttcttgataggttttggatcatgcaagttcctggcatccgagtaagttcagtccataattgtttcagatgttcttctttctccttattacatatgactggtaaattaattaaattttgctggattggtgcaggacatctgctgcatcagcactgactcgaggaagcatgtggatgatcttcgcagctgcgtctatgatgtttcttcatctgagagttttccaatccgtgtgaattgggtcgatgctaccaaagtaattagtacctgtggtggtttggttctctttgtagtatattacttatgtaagaagcaaggaacagtgctagttttttcgtgtaaaattgtgaagattatatattactacctccatcccaaaatgtttgacgccgttgactttttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0149900, RefSeq:Os07g0149900