Os07g0195400

From RiceWiki
Revision as of 20:32, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0195400

Description

Phosphoglucomutase/phosphomannomutase family protein

Version

NM_001065652.1 GI:115471036 GeneID:4342646

Length

3661 bp

Definition

Oryza sativa Japonica Group Os07g0195400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:5211242..5214902

Sequence Coding Region

5211484..5211626,5211730..5211826,5211930..5212105,5212216..5212631,5212712..5212960
,5213046..5213188,5213283..5213402,5214491..5214835

Expression

GEO Profiles:Os07g0195400

Genome Context

<gbrowseImage1> name=NC_008400:5211242..5214902 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:5211242..5214902 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgagctcgcggcgggaggcgaccagcgcgccgcgctgctcgcggcggccaccctcttcccgccgccgcccgacggcgcgaggttctcgtacgggacggcggggttccgcgcggagggggccgccatgggccccgcggtgtgccgcgccggggtggtggcggcgctgcggtcggccaagctgggcggcgccgccgtgggggtggtcatcacagcctcgcacaacccggtccgcgacaacggcgtcaagatcgtcgacgcggacggcgggatgctgtcgcaggactgggagccgttcgccgacgcactcgccaatgcccccaaccccgacgccctcctccagatagtgcttcagtttgcaaaagatgaggatattaaacttggtggaagccactcggcacaagtgctgctggcaagagacacgaggccaactggagagtacctccttgatgtggcggtgaagggagtaaatgcggtaataggtgcagtagcagttgacatggggatcctcaccactccacagctgcattggatggtccgaagtaaaaacaaaggactgaagtcttctgagacggattatttttcacaagttattgattcattcaggtgtttattggagttagtcccaaaagataaagaagctgatgtgataaacaatagactaattgtggatggagctaatggcattggtgggttgaaacttgaagaaataaaggcaaaaatctctggattagacattcatgtgaggaattcagggaagggagaagggatacttaatgagagttgtggtgcagactttgttcagaaggagaaagttgttcctcttggctttggtcctgaagatgtcggtttcaggtgtgcaagttttgatggcgacgctgaccggcttgtttatttccgtatcgtatcctctagtgacactaggattgatctcgttgatggtgacaagatattatcactattcgtgctgtttattagagagcaattagatattatcaatggaaaagacaataaaggaaatgaagtacttcctacacgttttggtgtaattcaaacagcttatgcaaatggtgcatcaacagattttctcaagaacattggtctcgaagttgtattcactccaactggagtgaaatatcttcacaaggaagccctaaaatatgatatcggtatctactttgaagccaatggacatgggacagtgctattctcagatcattttgtctcacaactggaatctttgaccagtgagttttcttcaaaggctgcaggttcttcacaacaccaagctgctatgagattgttggccacaagtcagctaattaatcaggcagttggagatgctttaagtggaatgcttttggtggaggctgttttgcaatacaagggctggtcgtttcagaattggtgtgacctgtacactgatctgcccagtagacaattgaaggttaaagttcaagatcgaaattctattgttacaacagatgcagaaagaagggtttgccagcctaatgggctgcaggaactgatagatggggagatatcaaattactctcatgggcgatgtttcgtgcggccatctggtaccgaggatgtggtgcgtgtatatgcagaggcatcttcagaggaagcagctgattgccttgcaaaacgagtggcgcagcatgttgagcgcattcttggataa</cdnaseq>

Protein Sequence

<aaseq>MAELAAGGDQRAALLAAATLFPPPPDGARFSYGTAGFRAEGAAM GPAVCRAGVVAALRSAKLGGAAVGVVITASHNPVRDNGVKIVDADGGMLSQDWEPFAD ALANAPNPDALLQIVLQFAKDEDIKLGGSHSAQVLLARDTRPTGEYLLDVAVKGVNAV IGAVAVDMGILTTPQLHWMVRSKNKGLKSSETDYFSQVIDSFRCLLELVPKDKEADVI NNRLIVDGANGIGGLKLEEIKAKISGLDIHVRNSGKGEGILNESCGADFVQKEKVVPL GFGPEDVGFRCASFDGDADRLVYFRIVSSSDTRIDLVDGDKILSLFVLFIREQLDIIN GKDNKGNEVLPTRFGVIQTAYANGASTDFLKNIGLEVVFTPTGVKYLHKEALKYDIGI YFEANGHGTVLFSDHFVSQLESLTSEFSSKAAGSSQHQAAMRLLATSQLINQAVGDAL SGMLLVEAVLQYKGWSFQNWCDLYTDLPSRQLKVKVQDRNSIVTTDAERRVCQPNGLQ ELIDGEISNYSHGRCFVRPSGTEDVVRVYAEASSEEAADCLAKRVAQHVERILG</aaseq>

Gene Sequence

<dnaseqindica>3277..3419#3077..3173#2798..2973#2272..2687#1943..2191#1715..1857#1501..1620#68..412#agatctcagcaggtcgccgcagacctctccgtcggcggcgagagggtttcgatccacccgcagcgccatggccgagctcgcggcgggaggcgaccagcgcgccgcgctgctcgcggcggccaccctcttcccgccgccgcccgacggcgcgaggttctcgtacgggacggcggggttccgcgcggagggggccgccatgggccccgcggtgtgccgcgccggggtggtggcggcgctgcggtcggccaagctgggcggcgccgccgtgggggtggtcatcacagcctcgcacaacccggtccgcgacaacggcgtcaagatcgtcgacgcggacggcgggatgctgtcgcaggactgggagccgttcgccgacgcactcgccaatgcccccaaccccgacgccctcctccaggttgcctctccttcgctggatctcagcttaccacatgccctgaccttgttagattgcgtactacagctagctagtcagttcgatttgttactgtctgacgcgtaatctctttcctctgtgttgatttttgtaacatgagagctaattttgttaataggatgagctagccagatcgccagtcacctaagttagggtgtgtttagttcacgccaaaattggaagtttgattgaaattggaacgatgtgacggaaaagttggaagtttatgtgtgtaggaaagttttgatgtgatagaaaagttggaagtttgaagaaaaagttgggaactaaaccaggccttacaaactctagaaatttattgaaccagagcaggtgatgctcgagttcttgggatgctccaaattgtgctagagcatggataacacttcacagtttctaggacagtgcatgactctttaagtctctaacatgaacaaaacatgttgctaacaagaatctgacagctctagagatgacagtattggcaccattgtcttgtcaaagttcattcagagctgaaacaaatcctctagggtaaaatatactgcaagtcgtaaaaccttgtggttgtacttggtcctcttctgagtttactttgtttctttcactccaccatctccaaagcaaattagttatattcaatcgtttctctttagaaaggtttcaggtttcctccatcgctgctttaggtgaacaacacatcaacagtttttatcttaaatcctcaagatctagttcactccagcattgtcgaacattcttgcatttgaaaaatgagtggtcatcatcctcatgaaacctccagcatattggaattatagtaatgtttaaattccttgatcaatgttaaagactctgatggtgctaattggtacttgatactgttggaaaacagaacttcagtgcctcaatattatcattggattgaactatggaactaatgaggagtggcatcttctgcctgagatgttaagtttgttcagatagttgatagttttgtttctgcctactcttaccctcagttttcttttatgtttgttgaattgtagatagtgcttcagtttgcaaaagatgaggatattaaacttggtggaagccactcggcacaagtgctgctggcaagagacacgaggccaactggagagtacctccttgatgtggcggtgaaggtatgacatcaatttacatcctttattctgtattcactgtatgtctcatgttcatgagtcaatcttaatagttttctggaactcatgcatgaagggagtaaatgcggtaataggtgcagtagcagttgacatggggatcctcaccactccacagctgcattggatggtccgaagtaaaaacaaaggactgaagtcttctgagacggattatttttcacaagttattgattcattcaggttcttctgaatttaattctctgctactgtaagtaataaatatgtggcatctatttgtttgcataatttaactatattgcaataggtgtttattggagttagtcccaaaagataaagaagctgatgtgataaacaatagactaattgtggatggagctaatggcattggtgggttgaaacttgaagaaataaaggcaaaaatctctggattagacattcatgtgaggaattcagggaagggagaagggatacttaatgagagttgtggtgcagactttgttcagaaggagaaagttgttcctcttggctttggtcctgaagatgtcggtttcaggtgagtcagttaattgctccttaaatttctacttgtcagttgtcactgatcttacctggccattctgatctaactttcaggtgtgcaagttttgatggcgacgctgaccggcttgtttatttccgtatcgtatcctctagtgacactaggattgatctcgttgatggtgacaagatattatcactattcgtgctgtttattagagagcaattagatattatcaatggaaaagacaataaaggaaatgaagtacttcctacacgttttggtgtaattcaaacagcttatgcaaatggtgcatcaacagattttctcaagaacattggtctcgaagttgtattcactccaactggagtgaaatatcttcacaaggaagccctaaaatatgatatcggtatctactttgaagccaatggacatgggacagtgctattctcagatcattttgtctcacaactggaatctttgaccagtgagttttcttcaaaggctgcaggtgaactcttcatgatttttccagcatttcttttctcttttgcattgttggatctatttgtttatggttgtcgtgatgtttccccctttccttttaccttttcacattaggttcttcacaacaccaagctgctatgagattgttggccacaagtcagctaattaatcaggcagttggagatgctttaagtggaatgcttttggtggaggctgttttgcaatacaagggctggtcgtttcagaattggtgtgacctgtacactgatctgcccagtagacaattgaaggtattttcgccaaagtacctggagttattacctcttcttttctaagatacgcctctagttatcactgtcatatcaggctcccataatataattatgatttcaggttaaagttcaagatcgaaattctattgttacaacagatgcagaaagaagggtttgccagcctaatgggctgcaggaactgatagatggggagatatgtaagtaacatcttctctgagcatataatacttatgtttctttccgacatccgattttcttggcataaattgaagtgttactgaattctgaggtaccctgcagcaaattactctcatgggcgatgtttcgtgcggccatctggtaccgaggatgtggtgcgtgtatatgcagaggcatcttcagaggaagcagctgattgccttgcaaaacgagtggcgcagcatgttgagcgcattcttggataatttgccttccctttttttatctcttcattttccagaagtttaaagtgttcactttagctcaattgcctgacacatttgaagaatatcaaaatccatttgtttgtaatgcaacactacatgtttattcgaaattttcagattgtacatactgtgtgtagagccatcagttattgtaccaaaaaaatagtatgaacagattgagttccaacgcttctttttttaagaaaggaagttgtccgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0195400, RefSeq:Os07g0195400