Os07g0300900

From RiceWiki
Revision as of 20:34, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0300900

Description

Similar to Lysine-sensitive aspartate kinase

Version

NM_001065958.1 GI:115471648 GeneID:4342980

Length

8692 bp

Definition

Oryza sativa Japonica Group Os07g0300900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:12226699..12235390

Sequence Coding Region

12226913..12227068,12227162..12227224,12227421..12227537,12227975..12228097,12228178..12228270
,12228352..12228471,12228674..12228790,12229154..12229249,12229345..12229494
,12229832..12229986,12234590..12234630,12234720..12234802,12234928..12235341

Expression

GEO Profiles:Os07g0300900

Genome Context

<gbrowseImage1> name=NC_008400:12226699..12235390 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:12226699..12235390 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggctctccggtgcaacccgcggccctctgcggcggttgctctccgcggtgccgccgcagccccgcaggtcgggaatgaggctgccttcgagctgctggtcggtgccaccgagccttgcctgcggggccggaggaggggtgcggggattcggtgccagcgaagtgcggctgccagcgcggtcgtcgtcgagaagaagagtcgcgcggtggagccggcgcgggagggggccaatgccggtcacacggagtcggagctcaccgtggtgatgaagttcggcgggtcgtcagtggcgtcggccgagcggatgcgggaggtggccgatctcatcctcagcttccccgaggagcggccggtgatcgtactctccgccatggggaagaccaccaacaagcttctgatggctggggagaaagcggtgggctgtggtgcaacaaatgtgtcggagcttgatgagctcacctttattaaggaattgcattttgggaccattgatcaacttggattggataggtcaattgtttccggcttgtcggatgagcttgagcaacttcttaagggaattgctatgatgaaagagcttactcttaggacaagagactatcttgtttccttcggtgaatgcatgtcaacaaggatatttgcggcacttttgaataaacttggggtgaaagcacgtcagtatgatgcatttgaaataggctttataaccactgatgatttcacaaacgctgatattctggaagcaacttatcctgccattgcaaagaggctacatggggactgggttactggtcctgctattccaatagtcactggttttctcggaaagggatggaaaactggtgcaatcaccactttaggcaggggtggtagtgacctgacagctactaccattggcaaagccttgggattaagagaaatccaggtttggaaagatgttgatggtgttttaacttgtgatcctaatattcatccaaatgcgaaacctgtgccatacttgacatttgatgaggcagctgaacttgcctattttggtgcacaggttttgcatccacaatcgatgcgaccagctagagaaggtgatatacctgtcagggttaaaaactcttataaccgccgagcccctggtacactcattactaaagctagagatatgagtaagactgttttgactagtattgtacttaaatcaaatattacaatgcttgatatagtgagcacacggatgcttggacaatatggttttctagctaaggtcttttcaatttttgaagatttgggcatctctgttgattgtgtagctacaagtgaagtcagcatatctttgaccctggatccatcaaaactctggagtcgtgaattgatcaagcaggcaaatgaacttgatcatgtcatcgaagaacttgaaaagatagcagttgttcacctactgcagcatagatcgataatttcgttaattggaaatgtgcagaggtcatctttgattcttgaaaaggctttcaacgttttacgtacaaatggagttaatgttcagatgatctcacaaggggcatccaaggtgaacatttccttggtggtccatgacagtgaggcaaagcagtgcgttcaagccctccactcagcattctttgagagtggtttcttgccagaagtcaatgatattctgcaggacgactctgtggcacattccaatggcacagtttacaggcattag</cdnaseq>

Protein Sequence

<aaseq>MAAAAALRCNPRPSAAVALRGAAAAPQVGNEAAFELLVGATEPC LRGRRRGAGIRCQRSAAASAVVVEKKSRAVEPAREGANAGHTESELTVVMKFGGSSVA SAERMREVADLILSFPEERPVIVLSAMGKTTNKLLMAGEKAVGCGATNVSELDELTFI KELHFGTIDQLGLDRSIVSGLSDELEQLLKGIAMMKELTLRTRDYLVSFGECMSTRIF AALLNKLGVKARQYDAFEIGFITTDDFTNADILEATYPAIAKRLHGDWVTGPAIPIVT GFLGKGWKTGAITTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNIHPNAKP VPYLTFDEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYNRRAPGTLITKARDMSK TVLTSIVLKSNITMLDIVSTRMLGQYGFLAKVFSIFEDLGISVDCVATSEVSISLTLD PSKLWSRELIKQANELDHVIEELEKIAVVHLLQHRSIISLIGNVQRSSLILEKAFNVL RTNGVNVQMISQGASKVNISLVVHDSEAKQCVQALHSAFFESGFLPEVNDILQDDSVA HSNGTVYRH</aaseq>

Gene Sequence

<dnaseqindica>8323..8478#8167..8229#7854..7970#7294..7416#7121..7213#6920..7039#6601..6717#6142..6237#5897..6046#5405..5559#761..801#589..671#50..463#ctcgccctcggccacccggcgcctccttccctccctactctctctccacatggcggcggcggcggctctccggtgcaacccgcggccctctgcggcggttgctctccgcggtgccgccgcagccccgcaggtcgggaatgaggctgccttcgagctgctggtcggtgccaccgagccttgcctgcggggccggaggaggggtgcggggattcggtgccagcgaagtgcggctgccagcgcggtcgtcgtcgagaagaagagtcgcgcggtggagccggcgcgggagggggccaatgccggtcacacggagtcggagctcaccgtggtgatgaagttcggcgggtcgtcagtggcgtcggccgagcggatgcgggaggtggccgatctcatcctcagcttccccgaggagcggccggtgatcgtactctccgccatggggaagaccaccaacaagcttctgatggtatacctacctccttgcaccagaaccccagttctgttgttaccctgaatactcgtgcgcgttggttctgtgatagagaggtgtttgataagtctcaagcactgactccttgattttgcttctaggctggggagaaagcggtgggctgtggtgcaacaaatgtgtcggagcttgatgagctcacctttattaaggaattgcattttgggtgtgattctgattcaaaatgctttactttcattgggtggattgatttgaaacgctttacctaatttcttgctgtttttctttatctaggaccattgatcaacttggattggataggtcaattgtttccggtaaagacatttcacacttgctttagcattttttttccgactatataaggtttaagtctcatctatggtattggagaactttgaggtcatgaaacatgtgcacagggaacttttgtttctttttgttgtaattgaagtggaatacaggatgttaagttcaaattggtcagtagaatgtgcactgcatgctgcatgggtcattttgcctttgcaacactattactactaataatttggccgtgctaatgctacggtagcatttagtaatataaagaatatatatgcttttgacaatcaagcataaaaataaaataatatagatttaatactaaaaaagtgacattataagttattatattgttaaatacatagccacactagtaaaaataacatcacagttttttcatcttttgaaaccatctgaatcctaataatatataaattcacaatcagtgcgtatccaacaccatctaatgtttgatgaatacctcgtttacaataaaatttattatctgctataagatgtctagcatttttttttagaaatcataaaaatatagctttttctatacacctgccaccaaacataattttccttctattttatctgctcacatcacccagttaaacgttaggaggagtaacgttgttattctttttataaatcggcaaatccatctctcccatagttccatatggaggcactggccagcttcaacattcaacccaatgcacttgtatcaacgccctcatcgaggatttaccatatggttacctatatattgagatgttaacgtagatagataataaaaatacttagtacgataccaacgctaataagtacatttagaacataaacattaagcatgtatttttgaaagagaaatcaacctaccagccatgaaagcatcagttgcatcccatgtcttatccattgaacagtttaaagtattgctgtccatgtacacacataaattgagtattgtgttttccaagtacaggcaaattatctgagcaatctaggatctgccagttctatttatcctctaatgttatacttaggccccgttcgatgcttccaaaaggaggtaaattttttcacgcacgcgaaacgagaaacctcattagcacatgattaattaattattaactattataattttgaaaaaatggatttaattgccttttttaaacaactatatagaaacttttttaagaaacacaccatttaacagtttgaaaagcgtgctaacggaaaacgaggaagttgaagaaaagaactaagccttacactgaaactgaggtttcattggccatccaaaaaagaatcaatcaagatgctcataccctgaaggttatgttttaggatggtcaacgtttcaaatcaaagataggacaaactcaaatgtataaatattaattggattcatttacctgtcagccaatgcctcgacttatgattgatggaggagtcatagttgccttgtataccttgaagcagcaattgaagctcctgctgtctacaaggcaaaatttatcagattggtacttctaaatggatagcagatagtacattctagtatagacttttctttgtatgcttgatttagctataggccactatcactattatatctatacttattagttgcttacacaacagtacatataatacaatgaacaagtagcactttacaacaaagattgcaatatttgaacccgtttcattcgtttaatgtcaacaaataattaaaatctaagttcaactgcaaaaggaaaagagaaccaaccatattttgccactaagcaaccatcgctgcaaaatttaaggcaacataaatattatgctattatgttaaagacccattactttctgaaaaaaaaacagaataaagcaagacaaataatacaagagcttgttggttaactgatgagaaatactgagataaataaaatcgcacatcccaataagctgccataagtagaaactggacattaaggctatgtgatctgggaaagaaaaaatatacttcagtgtgctgtgaccttggaagaacatggatgcttctgttaccttatctctgtttaccttctttctttatgtctaaaatgtctgcactacaatgaaaagcaagctttaactattctaatcagcatgataattgtaaaggaaaggaaaagaaacaattatattccacatgagaggtactcagcttttagcaatgttttttttcctcgaaaatgcaagagaattgcgtttcatttcattaaggggaagaaaataaaggaaaaaaaaacaaagtaggagagaccaaagccctcctaccgtgaaaacacacacccatgccccggccaaccccggccatctagctgcctaggtttgccgaaccactaagaaacagcttttagcaatgtgatttgtgttcatctaatgcacaatctgtaaaccccagtgtaagaacaaatggacctgatcatcctcagtagtaaataagagactgaaaatccctctgctagataagttggcagcagctacacccatctgtggaacagtagaacacttagtagtgcaaactacaaaatacacaaagttgacatctcaataaattgtacgtttgcactcaaagtttattttgcaaaacaacacacaagctcatctagaaggaagatttcatcagcatagagccacagaccaaaaggcatatttacttattcaagactatcttacggagaactgaagattctaatgcacctgtttatcaatgcaacaattattacctaccactgactatacaattagaaataagcacctagcagatagtgctaattgtactctagtatatcgtgaactatataacaatttaacaaggacatttggcatcagttatccagtgtccagtaggtccgaagaacttgatcaacaactgcacggcttgaagaacatctgcagctgtaggaagcaagaatgaacagtgatcttattacctaaaagaacactgccaaaatagcagcaaatcactggataatagtaactactgcagcaagtgtaagctatctgaaaaacaacattttggcagatgctaaacaagtttctatttactgaatttttaaacaacagatcaacataatgcatactttagtgaatttacagttttgacttccgaggacaaagtgtgcagataaatgaaaatgaacacattagcagctataattcttgttgatgcaaaaatcaactaatcaagtgaagggtacctgattattttcggatggcagagtggcaatgtaagggtgtcatccttataaattggtcctgtccccaactgttgcaagcctctgtagtacaatgtttatgaagctcaaattaacttactgcatatacttataggcagcctgtaccagtaccagctcaaattagaggcattccaccaagcaatgaagatggctgtcactctgttcggtcgtggaggtggagtggccactgcttcaggaatcaggcgtcggcagatggagcgccggtgtattaggccgcagaaggttgggtacggcggccgtcgccacggagtggatagcgagcctgtgtcttgttggctgagttgccagcccccctgcagcgacgagtcagtggacgacgggaggagtcgaggtcagcggcgattttatggcgatgatggcgaatcttgagagaggttgatcgaggggcgcgattagggttaggcaccgtggtcctggagaattggaaaaaaggggaggagcttacctgtgtgcagtgaacggaccttgaggtcgacgtgactatgtatcggcggtggtggcgcctgaggcggaggacgcagcggcggcgtcgctttgtcggagatcggtgaggtgtcgaaatcggcggcggagggatggcagcatgagtacgaatcgacggaggtcgaggaggaagagggcggtgcggtttccggtgtcaacgtcggaggcaggtgtcgaagaggcgctcgtgacctgggaggggtgagcgcgatctgggtggggagggaggtgcgtgatctgatctggatcgggagggaggtgtgacgctgtcggatggaactcatcagttgattttcaatcgttggatgtgtcacatgatgaatgagtaaaacaacttgttgaactatagggtagatgaaatgacaacatgcgtgcatcatgtagcatgatttctcaaacttcattcctatttgttaggttgcacccattcatcgatctcagaagcctatcattgttatcaagaaaactgttgaatatgatggaaatacttgaaagtatggtttaatgaaattctgtgtaaaaacaactgccgttctgtgttagtttcacaaagggtagttaggtttctgaaatttactcataatgtattaatctctatctagtttctggcattgctttattatactatgctaaatgtatggtgtttattgctttagtataaattgcttatgtctagagtgattgtggaaagcattgttagatcattattgggctgtaatgttacattagcttccattttctttggtacatcaattacccttgatagacgcaacatagaaattaccatagtcaatatgaaatattgcaggcttgtcggatgagcttgagcaacttcttaagggaattgctatgatgaaagagcttactcttaggacaagagactatcttgtttccttcggtgaatgcatgtcaacaaggatatttgcggcacttttgaataaacttggggtgaaagcacgtcaggtatattctcttcaattgaatttcttttatccgctctaccttgttgatttaaatattccttcttgtttgacatctctgaatatagccagtgcttactgctattttcagtattattttagttcgtatagcctagcagtcagccagcaaaagtcatttatgtaccgaaaacaatacaaatgtacaagtgttctgaatttatattaattcttttctatccaacaggtgcttctttagataagaaatacccaacgtattttttgaagttataccaatgatactttagctaaacccagaattttgatacagctataattaattgattcttgatattttgcagtatgatgcatttgaaataggctttataaccactgatgatttcacaaacgctgatattctggaagcaacttatcctgccattgcaaagaggctacatggggactgggttactggtcctgctattccaatagtcactggttttctcggaaaggttggccatctaacccattttacacattttaattgaatggtaccgatactccatgtctccatctgtccttatagtgttcacatgtgaacttgtagggatggaaaactggtgcaatcaccactttaggcaggggtggtagtgacctgacagctactaccattggcaaagccttgggattaagagaaatccaggtttgttttacagttgataccatatcttgcaattagattattttgcctctggtaacctctaccattgacaattactattttcagtaaggacaaaaaatgcccattttgttccctgttgccattacgttagcctttcgtcaaatgcactccattagccccatgcaaaaagtccatttaatcattggaagtgtaatgtcagcatagagagagcttcatactctccatcgccatcaccaactcatgtttgtaattatcagaacttgctcaaatttactttcctactaagcatcctgttttacttgtttgttttaattctcaatgcagtgaacttatatttcttcccatattcctaaatcctaataggtttggaaagatgttgatggtgttttaacttgtgatcctaatattcatccaaatgcgaaacctgtgccatacttgacatttgatgaggcagctgaacttgcctattttggtgcacaggtaccgcatgatttttatcacttttatttatctatccatttgtaaaagtcaatgttattttttcagtgggttttcttttagtaaaacagtttcccttttagatggtttactttttagcttaataatttagtgaccaattggttgtcttctatatatccatttgttatctgcttacagaaatccctttactaactaattctaggttttgcatccacaatcgatgcgaccagctagagaaggtgatatacctgtcagggttaaaaactcttataaccgccgagcccctggtacactcattactaaagctagagatatgagtaaggtttgatgcttgactattttctaatattggactcatctacttgttggttgcaacttattgagtcttggatgactttttcagactgttttgactagtattgtacttaaatcaaatattacaatgcttgatatagtgagcacacggatgcttggacaatatggttttctagctaaggtacagctagagcttacacattcttaagtttaatcttgtattttattcttttagttgtaatatttgtattgcttcttcaggtcttttcaatttttgaagatttgggcatctctgttgattgtgtagctacaagtgaagtcagcatatctttgaccctggatccatcaaaactctggagtcgtgaattgatcaagcaggcaaatgtttggacctgaatccattctttattatttctcatgattatttgatttttgtccaagctgcctttttttgggatcttgttgagcagtcttcttcattttttattttgtaccaaggaaaaaaaaactgccactaccatatttaaatctgctcaggacctcaaccgcaggcattatattgcataaggaagtaaatatactagaactatgaatcattcaagaattaagataaggaatattgaatgttgtgctcagtaaaaaaaaagtggtagttgtgcctttgatgaaatcttgaaattataaaaacaaattattggttgaggataatcttcgaagactctagcatatttcgacacaaatgaacaagttactaggttccaattaatgatgcatcttccagcttgatgtgcttgtagttcatctctagtgatatgtgccaggaacttgatcatgtcatcgaagaacttgaaaagatagcagttgttcacctactgcagcatagatcgataatttcgttaattggaaatgtgcagaggtcatctttgattcttgaaaaggtaaatgcttgtcccctaactttaactgtctctacatccataatgttgttctgaagttccaatttcagctacggttaatatctgtttaatgctagcttgtgggaaacatctcagaaatatcctgctcaagcagcatggaacacagcttttgtttttcttcccaatacatggttgatatccattctcattttgtcaggctttcaacgttttacgtacaaatggagttaatgttcagatgatctcacaaggggcatccaaggtgcttatattttctttcatgtttgattttgatgatggattgcaattttgtgtgattcctgactgatgaaagaaacctatcatccttaaacaggtgaacatttccttggtggtccatgacagtgaggcaaagcagtgcgttcaagccctccactcagcattctttgagagtggtttcttgccagaagtcaatgatattctgcaggacgactctgtggcacattccaatggcacagtttacaggcattagtcagaagtttaatccttatgttgtactgtagttataccatttgcagcctcagaatctgatcgttctcaggctaaaaacccaatgttgtaggagggaaggagcaattccggctttttatagtattctagttggctctggtttactaccaaaatgggcatactaccattgttaccattctttgcagagcaagtaattgctagggagctagtagcct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0300900, RefSeq:Os07g0300900