Os07g0417700
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os07g0417700 |
|---|---|
| Description |
RNA-directed DNA polymerase (Reverse transcriptase) domain containing protein |
| Version |
NM_001188232.1 GI:297725594 GeneID:9272699 |
| Length |
6833 bp |
| Definition |
Oryza sativa Japonica Group Os07g0417700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:13924828..13931660 |
| Sequence Coding Region |
13924828..13925412,13926811..13927026,13928498..13929165,13930094..13931660 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008400:13924828..13931660 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008400:13924828..13931660 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggaggcaaatgctgagagtcgcttgatccgacaggcttcggataaattgaatgagatgctttatagagaggaaatgctttggttgcaacggtcccgtattaactggctaaaggaaggggatagaaatactcggtttttccacagcaaagcagtttggcgggcgaaaaagaatataattgtcaggctgagggactcaggaggcactgtacaaaattcgacaacagtgatggaggatatggctaccaagtatttccaagagatgtacacagctgatagtaccttagatcacacacagataatacacctcatccaggagaaagtaacacctgaaatgaatgaatccctgtgcagagagttttctgaggaagaaattgccacagctgtctttcagatagggccgcttaaggcaccaggtcctgacggttttccagctcgtttctatgaaaggaactggggtgtgttgaaagaagatatagtgagagtggtgaaaaccttcttcctgacaggagttatgccctcaggggtgaacaacactgctatagtgctcattccgaagattgaacaacctatggaggttaaagattttcgtcccataagtctctgcaatgtcctctataagtttgtgtctaagtgcttggtaaatagattaagacctatccttgatgagctggtttctcaatcacagagtgcatttgtcccaggacgtctgattacggataatgctatcttggcctttgagtgttttcattcgatccagaagaacaagaatccaaacagttcatcttgtgcttacaaattggatttgtccaaagcctacaatcgcgtggattggaccttcttggagcaatcaatgtataagttgggtttctctcatcgttgggtttcctggataatggagtgcataacctcggtgagattctctgtcaaattcaatggaaccttacttgatacatttgctccttcccgcgggttacggcagggtgatcctctatccccattcttgttattgttcgtggctgatggattatctttactgctggagtataaagtgtctcagggtgctattacccctgtacatatctgtcgccgtgcactggggatctcacacctctttgccgacgatactttgcttttcttcaaatctgacaaccagcaggcaaaggtgatcaaagaaaccctgtcaacatatgcagcggcgactggacagttgatcaaccctgcaaagtgttccattctgtttggtagttcctctacgtctgctgtgtgtgatgccattaagcataccctgcagattgttaactcctcctttgaggacaaatacttgggctttcctaccccagaaggaagaatgaacaagggtaagttccaaaccttacaggagaaaatctggaagaggatcatttcgtggggagaaaatcttctatctagtggtggaaaagaggtcctgatcaaatcggttattcaagccataccggtttatgttatgggaatgttcaaattacctgaatcggtctgcgaggatctgaacaggttgactaggaatttctggtggggggcagataatggagaggaacgagatgtttctctcatgattatgtggcgtaattggttcgttcgtaatgagctaacacatggcaaaagccccccgccagtagaggtttccaaacgattcctggaaagctatttacagtcgctgttcatgatccgacaacaccccaccgctgagctgacaaaagggaagcaggtagtgtacatgtatcccagggacagggaaaagagtaaaaggcagagggtggccagcgatctgctgtggtcatgtccggaaactggatggatgaaggttaatgtagacggatcctttgatgcgcagcaggaaagtggtgggatcggcgtagttatgagaaacagcgaagggagagtgatctttgcagccttcaaaagtctgaatggttgcaagagtgcacttgaagcagaactggaagcgtgcagggagggcatcgttctagcgtctcaatggacgatgtgccccttctatatagaatctgactgtcaagtggctttgcagatgatccagggcaaggaggaagagaggtcagagttagcatacctcatcagagagatagtgagtgctgcttttgggaatagggagattcgtctcaggaagattcacaggagccaaaactctgttagccactacttggcaaataagggccgatgtgagagtcttagtaagggattcgtattgctgttccgggacagagtaggtggcgaccggaaggccgccgtcaccccgcaggtgatcgccggcgacctcttcaggatcaagccggtgtactcactgctacgaccacttctcctacaccgacaattcgcgaggtggttcgaggttctacatcctctacatccaccccggaccaagcgagaacaattgcaatggcttcaaacaacgatccaactcattgagccttttgatgggtcaaattatgctaagtggaaggctgatgtgttactcaacttaggcatactcgattatgattatgccattagagaggaccgtcctgaggagccttttagtgttgagcacgattatgaggagaaactgaagttatatcgtgagaaaactaatgaatgggagaagtccaataggatttctctcatgtacatcaagagtgccatatcaactgtcattattggtggtattgaggattctgatgatgttaagacatacttagaaaatattgataggaacttcaggagttcttctaagtcttacgctagctctataattaagcgcctaacgtccatgcgctataattataaagatggtgtgagaaagcacattatgcagatgggtgctatgaatggagagcttaagagtatggacatgggaattaatgatgatcttctagtccattttatcttgagttcacttccttctgattttgagtcttttatcattaactataataatcagagggataagtggtccattgaagaactcatttctcattctgttgaggaggaggatcgttag</cdnaseq> |
| Protein Sequence |
<aaseq>MEANAESRLIRQASDKLNEMLYREEMLWLQRSRINWLKEGDRNT RFFHSKAVWRAKKNIIVRLRDSGGTVQNSTTVMEDMATKYFQEMYTADSTLDHTQIIH LIQEKVTPEMNESLCREFSEEEIATAVFQIGPLKAPGPDGFPARFYERNWGVLKEDIV RVVKTFFLTGVMPSGVNNTAIVLIPKIEQPMEVKDFRPISLCNVLYKFVSKCLVNRLR PILDELVSQSQSAFVPGRLITDNAILAFECFHSIQKNKNPNSSSCAYKLDLSKAYNRV DWTFLEQSMYKLGFSHRWVSWIMECITSVRFSVKFNGTLLDTFAPSRGLRQGDPLSPF LLLFVADGLSLLLEYKVSQGAITPVHICRRALGISHLFADDTLLFFKSDNQQAKVIKE TLSTYAAATGQLINPAKCSILFGSSSTSAVCDAIKHTLQIVNSSFEDKYLGFPTPEGR MNKGKFQTLQEKIWKRIISWGENLLSSGGKEVLIKSVIQAIPVYVMGMFKLPESVCED LNRLTRNFWWGADNGEERDVSLMIMWRNWFVRNELTHGKSPPPVEVSKRFLESYLQSL FMIRQHPTAELTKGKQVVYMYPRDREKSKRQRVASDLLWSCPETGWMKVNVDGSFDAQ QESGGIGVVMRNSEGRVIFAAFKSLNGCKSALEAELEACREGIVLASQWTMCPFYIES DCQVALQMIQGKEEERSELAYLIREIVSAAFGNREIRLRKIHRSQNSVSHYLANKGRC ESLSKGFVLLFRDRVGGDRKAAVTPQVIAGDLFRIKPVYSLLRPLLLHRQFARWFEVL HPLHPPRTKREQLQWLQTTIQLIEPFDGSNYAKWKADVLLNLGILDYDYAIREDRPEE PFSVEHDYEEKLKLYREKTNEWEKSNRISLMYIKSAISTVIIGGIEDSDDVKTYLENI DRNFRSSSKSYASSIIKRLTSMRYNYKDGVRKHIMQMGAMNGELKSMDMGINDDLLVH FILSSLPSDFESFIINYNNQRDKWSIEELISHSVEEEDR</aaseq> |
| Gene Sequence |
<dnaseqindica>6249..6833#4635..4850#2496..3163#1..1567#atggaggcaaatgctgagagtcgcttgatccgacaggcttcggataaattgaatgagatgctttatagagaggaaatgctttggttgcaacggtcccgtattaactggctaaaggaaggggatagaaatactcggtttttccacagcaaagcagtttggcgggcgaaaaagaatataattgtcaggctgagggactcaggaggcactgtacaaaattcgacaacagtgatggaggatatggctaccaagtatttccaagagatgtacacagctgatagtaccttagatcacacacagataatacacctcatccaggagaaagtaacacctgaaatgaatgaatccctgtgcagagagttttctgaggaagaaattgccacagctgtctttcagatagggccgcttaaggcaccaggtcctgacggttttccagctcgtttctatgaaaggaactggggtgtgttgaaagaagatatagtgagagtggtgaaaaccttcttcctgacaggagttatgccctcaggggtgaacaacactgctatagtgctcattccgaagattgaacaacctatggaggttaaagattttcgtcccataagtctctgcaatgtcctctataagtttgtgtctaagtgcttggtaaatagattaagacctatccttgatgagctggtttctcaatcacagagtgcatttgtcccaggacgtctgattacggataatgctatcttggcctttgagtgttttcattcgatccagaagaacaagaatccaaacagttcatcttgtgcttacaaattggatttgtccaaagcctacaatcgcgtggattggaccttcttggagcaatcaatgtataagttgggtttctctcatcgttgggtttcctggataatggagtgcataacctcggtgagattctctgtcaaattcaatggaaccttacttgatacatttgctccttcccgcgggttacggcagggtgatcctctatccccattcttgttattgttcgtggctgatggattatctttactgctggagtataaagtgtctcagggtgctattacccctgtacatatctgtcgccgtgcactggggatctcacacctctttgccgacgatactttgcttttcttcaaatctgacaaccagcaggcaaaggtgatcaaagaaaccctgtcaacatatgcagcggcgactggacagttgatcaaccctgcaaagtgttccattctgtttggtagttcctctacgtctgctgtgtgtgatgccattaagcataccctgcagattgttaactcctcctttgaggacaaatacttgggctttcctaccccagaaggaagaatgaacaagggtaagttccaaaccttacaggagaaaatctggaagaggatcatttcgtggggagaaaatcttctatctagtggtggaaaagaggtcctgatcaaatcggttattcaagccataccggtttatgttatgggaatgttcaaattacctgaatcggtctgcgaggatctgaacaggttgactaggaatttctggtggggggcagataatggtagaaggagaacccattggaaatcctgggctagcctaacgaagccaaaagttcaggggggggggggggctcggttttagagatgtcagattgtttaaccaagctctgttggctatacaggcctggcggcttattgctaatccggacagtttgtgctccagagttttaaaagctaaatattttccgaatggatcccttgtagacacaagttttggtggcaatgcttcccctgtttggaaggccatagaacatggtttatccctgctgaaagaaggaattatatggagagttggtaatggacgatctgtttggatatggcgggatccctggctgccaagagagatcactcgagaagaccaattacacagaagaaaaactgtcgattaaaatgggtctctgacctcattactgagaatggtacttgggatgaggctaagataaagctgtcctttactcccttagatgtggacttaatcatgaggattcgattaccgcatagggaagaggatgattttgttgcctggcatccggaccaacatgggagattctcagtgaggagtgcttatcaattggcactgaaactctcttgtttagaggagggctctagctcgtcggccttatgcagctcaaattcttgggatttaatttggaaaagcaatgtaccgcagaaagtcaaaaatctttgcttggaagatagcgagtaactgccttgctacgatggaaaacaaggtgaagcgcaagctggagcgcattgccacctgcacagtttgtggtacagaagttgaggatacaatacacgcgctatgccgatgtcccttggcaagccacttgtggtcggctatgcaaaaagctggaaacatttcctcagttcctgttgggtgtagtggcaatttacattagttttttgatcatcttcagttggtgtcaggagaggaacgagatgtttctctcatgattatgtggcgtaattggttcgttcgtaatgagctaacacatggcaaaagccccccgccagtagaggtttccaaacgattcctggaaagctatttacagtcgctgttcatgatccgacaacaccccaccgctgagctgacaaaagggaagcaggtagtgtacatgtatcccagggacagggaaaagagtaaaaggcagagggtggccagcgatctgctgtggtcatgtccggaaactggatggatgaaggttaatgtagacggatcctttgatgcgcagcaggaaagtggtgggatcggcgtagttatgagaaacagcgaagggagagtgatctttgcagccttcaaaagtctgaatggttgcaagagtgcacttgaagcagaactggaagcgtgcagggagggcatcgttctagcgtctcaatggacgatgtgccccttctatatagaatctgactgtcaagtggctttgcagatgatccagggcaaggaggaagagaggtcagagttagcatacctcatcagagagatagtgagtgctgcttttgggaatagggagattcgtctcaggaagattcacaggagccaaaactctgttagccactacttggcaaataagggccgatgtgagagtcttagtaaggtttggtgcgaaagtgattgcacttttatctcaaatcttgtaagaactgatatgtttcctgagtaatttaattcccttccctcgcaaaaaaaaaaaaaaaaattctgcttactaagggggtgtttgggagagagagggggctaagttaaaagggggtgtttgggagagagagggggctaaacaccccctaaatcaaaatttgttattagtttcagttttactgtttatttactattgtgatagatctaaaccgtttgctgcgcattggatggttgagatttatccaacgtcacaggactatggcatctccgatttagcttcagtactgtgtcacagcactgtgtcatctctgatttagtatctcaatccggtggtcatgtgtccgactatccgttgcatagtgttgttagcttgttcactcagggtgtttatatcagtttcctaagctgcatttggctatttgttcgttgttgacattactatcctctttccgacagacgtattgctgtagaacttctgtggctcgtaggtgtgcttacctttctccaaaattttcgctgatgtcttttggagttgctctgtacacgggacaccatcaccagactaacgccttttactcttttagggtaaaacttgcgtaaattacattgtatgcacaagaaattagcggatggatgcatttgacttgaaaaataaaatttttgaaactttatccataagttctcaaatgcttttctttttcaaaaataagaagtatgcatagatttgttgatgcgtatggacgaaaacatgctggtgagaccggtaaatagtgtcataaatattggcaagtaaaatcacatatttaacttatcatgactatataatagttcctccgttcaaaatatgagttttggttggatgggacacattataatactatgaatctgaatgtgtctcatccaaccaaaactccttatattttgggatgttgggagtataactttatataaccaaataattcaaggttacattgtaagttacaaattatctctcttttaggcatgtgttcaaattatacatttggttgatgaatgatgataaaactacgtggagacatggttggttacatagatatatcagagtatattatataacatgggtaatttccatgtaatatggtaaaataaagaaatagttgttaggaaagttaatttctcggctatggaaatcgggagaaaatcacgcattaccgttttccacccgttaaccagcgtgattagctaaatcaaatcacgattaaatttccttaattgcacacgcaataatcggtaacgcttccaacgtttccttttgaagcagcccctgattccctcagcgcaaaaaataaaaggggaggccggcccgtgagatagatgacgatctcactcacggttccaatctccccgacatcccaaaaccctaatttcccgattcttagttgcgctggaagggattcgtattgctgttccgggacagagtaggtggcgaccggaaggccgccgtcaccccgcaggtgatcgccggcgacctcttcaggatcaagccggtgtactcactgctacgaccacttctcctacaccgacaattcgcgaggtggttcgaggttctacatcctctacatccaccccggaccaagcgagaacaattgcaatggcttcaaacaacggtcagtaatcctaaattccgcattagggtgatcatgttaggcttagcacttatgtcttagtagatcgcaatatctacatttggtatcagagccactgctatagcctaatgatcccatcatcccgtttagaagccataaggtgcatctaagcctcgttttcatgtcggttttgatgcaaattacattagaattgatgttaattaatcatgtcttattcggattaagtttcgattaatcactgctcatggtttattaagtttatgtttacgttttaggatagatttaggcttgggtagcaattagaaggaggtgaatttcagcggatagtaacaatccccaatttccccaaatttttcgaaaccctaatttgagaaatccccagataagaaccctaaaagcccggcggattagcaaatttacttacccttatgacgaactcgctgccgtcgccgcgcgtggcatcagctcgccgtcgtctcggaccggcctcgcgcctgcctcccatgggccgcgcgaggtcgaggctcactgccgtggccccggctgcgcgcggaggagaaccgggacggtgggcgccgacacggcatcagaccgtgcggcatcagcccgccgcacggggagccgccggccgcggcctctccgccgcgcgctgtcgctgcgccgctccgccgccgtcgccgctgcgccctgccgccgccgcctccccgcgcgctcgaccacctctcgcgtgcgccgccccttgcgtgcggcgctgcatcacgcgccgtcgcgccgccgcctcgccgcgaaatcgccgccgccgctgcttctttcgagagagagagagttggggaaaagtttcttagggttagggttaaaagcggcaccgttttatgtttttttccttcttttgactaacaaggattaatccaaaccgtccatcagaacgaacggtgtggatcgatccggcatcgggctgtgccattagcaggccgccaagccgtactgggccgcgccgcgtgcatttttgggccgcacgtcaggccggcgggttaatgggctgcgccattagattttggctttttcacttatgttgtttttagaaattgcattagtaccatttatattgctgaaaaattatgaaagattttatggaggcttattaatttaattctagctaaatggaaccaatgggaaatttggctagatatttgtttttcatgatgtgaatttattttctaaccaacgttgattataaattcacgtaaatttaattatgattatgtttcccaaaattatttctgcccaacggtgatgtaattaggggaatttatttctgtttaattatgtaattaattgagccaacgaaaattaattgcatatatgtacttatggatattttcttcatgattttttcagatccaactcattgagccttttgatgggtcaaattatgctaagtggaaggctgatgtgttactcaacttaggcatactcgattatgattatgccattagagaggaccgtcctgaggagccttttagtgttgagcacgattatgaggagaaactgaagttatatcgtgagaaaactaatgaatgggagaagtccaataggatttctctcatgtacatcaagagtgccatatcaactgtcattattggtggtattgaggattctgatgatgttaagacatacttagaaaatattgataggaacttcaggagttcttctaagtcttacgctagctctataattaagcgcctaacgtccatgcgctataattataaagatggtgtgagaaagcacattatgcagatgggtgctatgaatggagagcttaagagtatggacatgggaattaatgatgatcttctagtccattttatcttgagttcacttccttctgattttgagtcttttatcattaactataataatcagagggataagtggtccattgaagaactcatttctcattctgttgaggaggaggatcgttag</dnaseqindica> 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