Os07g0527600

From RiceWiki
Revision as of 20:37, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0527600

Description

Similar to 2-Hydroxyisoflavanone dehydratase

Version

NM_001066369.1 GI:115472470 GeneID:4343436

Length

3453 bp

Definition

Oryza sativa Japonica Group Os07g0527600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:21256910..21260362

Sequence Coding Region

21256910..21257609,21257636..21257720,21259048..21260362

Expression

GEO Profiles:Os07g0527600

Genome Context

<gbrowseImage1> name=NC_008400:21256910..21260362 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:21256910..21260362 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcatgcacaaaagaatgccgtcgtcgtcgccgacgacgtcgccatcgatctccacccgttcatacgcaagtacaacgacggccgcgtcgagcgtatcctgcgcagcagcttcgtgccggcgtcggaggaccccgccgccagccgcggcggggtggcggcgagggacgtcatcatcgacgaacgcaacggcgtgtccgcacgcctgtttctcccgtccggcgccgacggcgggaggcggcttcttcccgtcgtcgtgtacttccacggcggctgcttctgcaccgagagcgccttcggccggacgtaccaccgttacgccgcctccctcgcctcgcgcgccggggcgctcgtcgtgtccgtcgagtaccgcctcgcgcccgagcaccccgtgcccgcggcgcacgacgacgcgtgggcggcgctccggtgggcggcgtccctctcggacccctggctcgccgaccacgcggaccccggccgcacgttcgtcgccggcgacagcgccggcggccacatcgcgtaccgcacggcggtgcgcgccgccagccgcgaaggcggcgacatcggcatcgaggggctcataatcatccacccttacttctggggagctcgcatgctgccttccgaggcggcctgggacggcgagtcggtgatcaagccgcatcaggtcggcgagctctggccgttcgtgacgtccggcaaggcgggcaacgacgacccatggatcgaccctcccgtcgaggaggtcgcgtcgctaacctgccgtcgcgcgctggtggccgtggcggagaaggacttcctacgcgaccgcggccgcctcctcgccgcccgcatgcgcggctgcgcgtgggccggtggcggcgacggacgcaacgtgacgcttgtggagtcggagggcgaggaccacgggttccacctctacagccctctccgcgcgaccagcaggaggctcatggagagcatcgtgcagttcatcaaccagcctagccatagccccgcgccgctgcggtggccggccaccatcctttccgagctgcatgacactaccgactcgccacagattcttctacccatgcccactagggagtacaaagcagtatttattgacaggttggaaaagagaactaaaacaggtgcaagctcagcaaatagtactgctgctaatgcatcgttaacaatcggccgggggaaactagcaacaaagaaaagctacgggttgttcttcggccggaccagagctcatatttacggagggttagcttctgcagggagcctgcagtgtcctcgtcccttctgtggagcaccgttgtcagatactcccatcgtttctttcaacacgtcgggatgtgcctctaaaacattttactctagtgtccgcgaggctattccacccgtccggaggcttcccatcgtggtctacttccacggcggctcgttctgcacggagagcgccttctgccgcacgtaccaccgctacgccacctccctcgcctcgcgcaccggggcgctcgtcgtgtccgtcgagtaccgcctcgcgccggagcatcccataccggcggcgtacgacgaagcgtgggccgcgctccagtgtcggcgactcggcgttccccccgtacagtacaaggtggacacgctctggccattcgtgacgcttgtggagtcggagggcgaggaccacggcttccacctctacagccctctccgcggtccgcgcagacaagcaggacgctcatggagagcatcgtgctgccggagttgcacgagcacttctactctccgttgcacgcaagcaatggcgatcagaagatgtcaaggggcgcaactgatttgtcttcgtcccggccgcattctgttaagcgtgccatctaggccgtaccttgctgcgtttcgtgatgagccggacaaggtgatagctcgaagtggcaagagatgcatggagattaacaatgcattaatagttggacaggagaaagcatcaaggagaagcttcgggttaatttcggcaagggccaagcctgataactggagggcctccaagaacccactgctgtcagcatcagtacgtctcaggattaccatggccaagaatttcttatag</cdnaseq>

Protein Sequence

<aaseq>MHAQKNAVVVADDVAIDLHPFIRKYNDGRVERILRSSFVPASED PAASRGGVAARDVIIDERNGVSARLFLPSGADGGRRLLPVVVYFHGGCFCTESAFGRT YHRYAASLASRAGALVVSVEYRLAPEHPVPAAHDDAWAALRWAASLSDPWLADHADPG RTFVAGDSAGGHIAYRTAVRAASREGGDIGIEGLIIIHPYFWGARMLPSEAAWDGESV IKPHQVGELWPFVTSGKAGNDDPWIDPPVEEVASLTCRRALVAVAEKDFLRDRGRLLA ARMRGCAWAGGGDGRNVTLVESEGEDHGFHLYSPLRATSRRLMESIVQFINQPSHSPA PLRWPATILSELHDTTDSPQILLPMPTREYKAVFIDRLEKRTKTGASSANSTAANASL TIGRGKLATKKSYGLFFGRTRAHIYGGLASAGSLQCPRPFCGAPLSDTPIVSFNTSGC ASKTFYSSVREAIPPVRRLPIVVYFHGGSFCTESAFCRTYHRYATSLASRTGALVVSV EYRLAPEHPIPAAYDEAWAALQCRRLGVPPVQYKVDTLWPFVTLVESEGEDHGFHLYS PLRGPRRQAGRSWRASCCRSCTSTSTLRCTQAMAIRRCQGAQLICLRPGRILLSVPSR PYLAAFRDEPDKVIARSGKRCMEINNALIVGQEKASRRSFGLISARAKPDNWRASKNP LLSASVRLRITMAKNFL</aaseq>

Gene Sequence

<dnaseqindica>2754..3453#2643..2727#1..1315#atgcatgcacaaaagaatgccgtcgtcgtcgccgacgacgtcgccatcgatctccacccgttcatacgcaagtacaacgacggccgcgtcgagcgtatcctgcgcagcagcttcgtgccggcgtcggaggaccccgccgccagccgcggcggggtggcggcgagggacgtcatcatcgacgaacgcaacggcgtgtccgcacgcctgtttctcccgtccggcgccgacggcgggaggcggcttcttcccgtcgtcgtgtacttccacggcggctgcttctgcaccgagagcgccttcggccggacgtaccaccgttacgccgcctccctcgcctcgcgcgccggggcgctcgtcgtgtccgtcgagtaccgcctcgcgcccgagcaccccgtgcccgcggcgcacgacgacgcgtgggcggcgctccggtgggcggcgtccctctcggacccctggctcgccgaccacgcggaccccggccgcacgttcgtcgccggcgacagcgccggcggccacatcgcgtaccgcacggcggtgcgcgccgccagccgcgaaggcggcgacatcggcatcgaggggctcataatcatccacccttacttctggggagctcgcatgctgccttccgaggcggcctgggacggcgagtcggtgatcaagccgcatcaggtcggcgagctctggccgttcgtgacgtccggcaaggcgggcaacgacgacccatggatcgaccctcccgtcgaggaggtcgcgtcgctaacctgccgtcgcgcgctggtggccgtggcggagaaggacttcctacgcgaccgcggccgcctcctcgccgcccgcatgcgcggctgcgcgtgggccggtggcggcgacggacgcaacgtgacgcttgtggagtcggagggcgaggaccacgggttccacctctacagccctctccgcgcgaccagcaggaggctcatggagagcatcgtgcagttcatcaaccagcctagccatagccccgcgccgctgcggtggccggccaccatcctttccgagctgcatgacactaccgactcgccacagattcttctacccatgcccactagggagtacaaagcagtatttattgacaggttggaaaagagaactaaaacaggtgcaagctcagcaaatagtactgctgctaatgcatcgttaacaatcggccgggggaaactagcaacaaagaaaagctacgggttgttcttcggccggaccagagctcatatttacggagggttagcttctgcagggagcctgcagtgtcctcgtcccttctgtggagcaccgttgtcaggttagctaatctccgtggccaatgacaaagagttctgatgggatacggtgtgttttactactgggcgatgacaagatgttgttttataattattatgtggaaaaacaactgttctggtaaaatctccctataacgtaagaaaagctggtattatgtcaaaaaatatttaaatcaatcaaggagctaagtacaagttatctgcaaccagttgtaagttgtaatgttcattcttattaaaattatttatgatccatcggtggtatgtacttttccggttttatattatattatataaatagctagaaaccaagtgacattacgtatctctaataatatgaaggtctgtcattaaagataactatgaattatggtcttgtacttacaagtactaatatttcaaaaatgaaattgctagaaaacttgcgacagttttcttgaattttcagcccttagatccgctccgtggttcgtgcaggcaagaaggaagaaaacagcaaaaaaaaaaggagaaaactgtcgaattttcagcactttgatccgctccgttattcgtccgtgcaagaaggaagtaaacagcaaaaaaaaaagtgttgtagacaggaatcaatcctaggccctccccttaaataagacagcattccaaccactaagccagctcaagtatatattgaatgaacaattacattttacttacgctataattagctacacaattagtcccctattttcctctaattttcggataatcttgttatatttctactctcttacgggcttgctagcaatgacatcagtgttggatgcaaaggcttaaaaaattttgaatgtttggtacctcgtttctgtcgaacgtcctataggtattcacgtgttttaatctacttacatagcacttacactttagttacatagtagttacttaacacttacaccgtaattaatacagagtagttacatagtacttatacctcaattatgtactagttacatgatagttatagtgtagctacattgtataaaattaggatttacaatttttttcaagagcatgcgtattacttttgaattatttttcccttatacatgttgaccaatttcatgccgttcaatcaatctgggtgctaagattagtggtttatacttatgtggacccgtttcaactgttgatgacagatcctatgaaagttttgagcctaaaaactatcgataactcactagctagttccaaaaaagaatacacgatagatcagcctttcgtacttatctttttttttttgactaagcttcgtacttatctttaatttttgtttttttttgaattacacagatactcccatcgtttctttcaacacgtcgggatgtgcctctaaaacattttactctagtgtccgcgaggctattccacccgtccggtacgtgccgccgccaccggccggaggaggcttcccatcgtggtctacttccacggcggctcgttctgcacggagagcgccttctgccgcacgtaccaccgctacgccacctccctcgcctcgcgcaccggggcgctcgtcgtgtccgtcgagtaccgcctcgcgccggagcatcccataccggcggcgtacgacgaagcgtgggccgcgctccagtgtcggcgactcggcgttccccccgtacagtacaaggtggacacgctctggccattcgtgacgcttgtggagtcggagggcgaggaccacggcttccacctctacagccctctccgcggtccgcgcagacaagcaggacgctcatggagagcatcgtgctgccggagttgcacgagcacttctactctccgttgcacgcaagcaatggcgatcagaagatgtcaaggggcgcaactgatttgtcttcgtcccggccgcattctgttaagcgtgccatctaggccgtaccttgctgcgtttcgtgatgagccggacaaggtgatagctcgaagtggcaagagatgcatggagattaacaatgcattaatagttggacaggagaaagcatcaaggagaagcttcgggttaatttcggcaagggccaagcctgataactggagggcctccaagaacccactgctgtcagcatcagtacgtctcaggattaccatggccaagaatttcttatag</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0527600, RefSeq:Os07g0527600