Os07g0537900

From RiceWiki
Revision as of 20:37, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0537900

Description

Similar to SRK3 gene

Version

NM_001066412.1 GI:115472556 GeneID:4343481

Length

3199 bp

Definition

Oryza sativa Japonica Group Os07g0537900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:21806701..21809899

Sequence Coding Region

21806761..21807191,21807277..21807701,21807813..21807938,21808014..21808135,21808233..21808443
,21808775..21809012,21809088..21809235,21809377..21809712

Expression

GEO Profiles:Os07g0537900

Genome Context

<gbrowseImage1> name=NC_008400:21806701..21809899 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:21806701..21809899 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgctcgccggctatggcatcctcgccgttgtcctcgtcctcctgccgccgtcggccacgccggctgggatcgctgactgcgacctcggcgtcggcaacacgtacgtgggcaacagcacgttcgaggcgaacctgaaccacctcgccgcggagctccccggcaacgtctccacggcgcataccggcggcttcgcggtcgccaccgtcggcgcggatcccgaccaggtgttcgcgctggcgctctgccgcggcgacgtgaacgccacagcctgccgcgcgtgcgtcgcggcggcgttcgtcgacgggaagaatgcttgccccggcatcaatggcgtcaccgtgtacgaggacgcctgcgtagttcgcttctccggccagaggttcatggatttcctcagtccggatcagtggcaggtcaccgagatgatttgggttcccgagcaagcctcggagagcgtcaatgcgccggcggttggctggttcaacgccgccatcgcgaagatcctcgccgccctggtcgaccacgccgtggccacggcgacgggcaacaactcgaccaccaagaagtatttcgccacgggtgaggaggacttcgaccccaacatctacgggttcgcgcagtgcgtgccggacctgacgcaggagcagtgcaaggaatgcctcaacaccttcctttttcaagcaaaacaagtgtactttggcaagagccttagctgggttggtatgaattcggtgtggtgcagactgatgtatagtgtgcggccgttctacggaggccgggcgatgctgcagctgtcggcgccaccaccaccagcagccgaggctccggttctatctctagagcctggagcagggaagaaaaagagtgcagctggaatcgctgccgtcgtcgcttcttcagttgtggtattgttgatcctttcattttttgcagttgttctcttcaggagaaggtccaaggttactgagactgaccaccagttgaggaagataacaagagcacaatgcttgatttttgacctgccagctctgcaagaggcaacggataacttctcggacaataataagctcggagaaggtggttatggtattgtatacaagggagtactctcagatggacaagaagtagcagtgaagaaacttttgggaacaagtgagcatggattggatcagctacaaaatgaggtgttgttattggcagagcttcaacacaagaaccttgttaagctacaagggttttgcttgcatcagggggaaacactgcttgtttatgaatacgtcaagaacgggagcctggataactttctattcgataccagtaggggaaacacaccaaactgggagcaactgtacaacatcatttttggaattgccaagggaatattgtatcttcacgaggactcaagcttgaggatcattcaccgagacctgaaatcaaacaacatcctacttggggaggacatggaaccaaaaattgcagattttggattggcaaggctactagaagaaggtcatactaatactcggacaactagaattgttggaacattcggttatatggcacctgagtacgcaatacacggaaatgtgtcaaccaagatcgatgttttaagttttggtgtgttggtccttgaaattgtaacagggagaaggaacctcaattctgacgatcatgatcgcgggaatctccttagtgatgtctggaattgctggacaaaagggacggttacacaactaattgaccaatcacttgaagagcaattccgaagacaagcactgcgatgcattcatatcgggctgctgtgtgtccagtcagatcctgatgacaggcctcacatgtcatctgtcattttcatgttgagtagggaaaacatgaatcttcagccaccggcacaacctgcattcttctttgatggagactcaaactcatgttctcaaccctttgagcaacccgtgtataatcggcctaatgcaatctatgaagaggatatctccgtgaataggatgacagttactgacatataccccagataa</cdnaseq>

Protein Sequence

<aaseq>MMLAGYGILAVVLVLLPPSATPAGIADCDLGVGNTYVGNSTFEA NLNHLAAELPGNVSTAHTGGFAVATVGADPDQVFALALCRGDVNATACRACVAAAFVD GKNACPGINGVTVYEDACVVRFSGQRFMDFLSPDQWQVTEMIWVPEQASESVNAPAVG WFNAAIAKILAALVDHAVATATGNNSTTKKYFATGEEDFDPNIYGFAQCVPDLTQEQC KECLNTFLFQAKQVYFGKSLSWVGMNSVWCRLMYSVRPFYGGRAMLQLSAPPPPAAEA PVLSLEPGAGKKKSAAGIAAVVASSVVVLLILSFFAVVLFRRRSKVTETDHQLRKITR AQCLIFDLPALQEATDNFSDNNKLGEGGYGIVYKGVLSDGQEVAVKKLLGTSEHGLDQ LQNEVLLLAELQHKNLVKLQGFCLHQGETLLVYEYVKNGSLDNFLFDTSRGNTPNWEQ LYNIIFGIAKGILYLHEDSSLRIIHRDLKSNNILLGEDMEPKIADFGLARLLEEGHTN TRTTRIVGTFGYMAPEYAIHGNVSTKIDVLSFGVLVLEIVTGRRNLNSDDHDRGNLLS DVWNCWTKGTVTQLIDQSLEEQFRRQALRCIHIGLLCVQSDPDDRPHMSSVIFMLSRE NMNLQPPAQPAFFFDGDSNSCSQPFEQPVYNRPNAIYEEDISVNRMTVTDIYPR</aaseq>

Gene Sequence

<dnaseqindica>61..491#577..1001#1113..1238#1314..1435#1533..1743#2075..2312#2388..2535#2677..3012#ggtgttccaatttacttgacaaaaagaaaaaaaaattctccccttcccccctttgctgcgatgatgctcgccggctatggcatcctcgccgttgtcctcgtcctcctgccgccgtcggccacgccggctgggatcgctgactgcgacctcggcgtcggcaacacgtacgtgggcaacagcacgttcgaggcgaacctgaaccacctcgccgcggagctccccggcaacgtctccacggcgcataccggcggcttcgcggtcgccaccgtcggcgcggatcccgaccaggtgttcgcgctggcgctctgccgcggcgacgtgaacgccacagcctgccgcgcgtgcgtcgcggcggcgttcgtcgacgggaagaatgcttgccccggcatcaatggcgtcaccgtgtacgaggacgcctgcgtagttcgcttctccggccagaggttcatggatttcctcagtccggatcagtggcaggtcaccgagatgatgtacggacaatctacatatctcccttctttcgatctcttcctgctagaatcagatagactaattcgagtagctcgttacaaacagttgggttcccgagcaagcctcggagagcgtcaatgcgccggcggttggctggttcaacgccgccatcgcgaagatcctcgccgccctggtcgaccacgccgtggccacggcgacgggcaacaactcgaccaccaagaagtatttcgccacgggtgaggaggacttcgaccccaacatctacgggttcgcgcagtgcgtgccggacctgacgcaggagcagtgcaaggaatgcctcaacaccttcctttttcaagcaaaacaagtgtactttggcaagagccttagctgggttggtatgaattcggtgtggtgcagactgatgtatagtgtgcggccgttctacggaggccgggcgatgctgcagctgtcggcgccaccaccaccagcagccgaggctccggttctatctctagagcctggagcaggtatggagtatgacctactctgttcttcatttttcctgaagaaaaaaaaataacagaagttacagtgaaatcaaggtttccccaattgaagttcatgtttggtgtttgcagggaagaaaaagagtgcagctggaatcgctgccgtcgtcgcttcttcagttgtggtattgttgatcctttcattttttgcagttgttctcttcaggagaaggtccaaggttactgagactgaccaccgtgagtagcatacagcctctgttcagtagctcgaatttactgttcactgacataatccttgtcatatggcaacagagttgaggaagataacaagagcacaatgcttgatttttgacctgccagctctgcaagaggcaacggataacttctcggacaataataagctcggagaaggtggttatggtattgtatacaaggtaaggttagcacccaaaaatgtaagagaaatgtttgaaatgtattatgcattagtgatcaaacgaagattaaattgcctgcaccaattgtgttcagggagtactctcagatggacaagaagtagcagtgaagaaacttttgggaacaagtgagcatggattggatcagctacaaaatgaggtgttgttattggcagagcttcaacacaagaaccttgttaagctacaagggttttgcttgcatcagggggaaacactgcttgtttatgaatacgtcaagaacgggagcctggataactttctattcggtaatttcccttctaatttatcatttcagaagcataatcataactctatcttcgtttgtcaatgtaaaaaaagattgcagtgctgatctactttgcaagtacaaaaactcccccttttctgtatgcacagacatatttataatagtggagtcgctgtactataaacactaacatcaataagaataaactgagcaatgcacaactgcaagttagtgtggggtactgaatatgtactgtagcatttctgacaaacaagttacatggctaagaatagaatttgacgtattataggtgagtgattatgattaaattaaacatttcatctcaacagataccagtaggggaaacacaccaaactgggagcaactgtacaacatcatttttggaattgccaagggaatattgtatcttcacgaggactcaagcttgaggatcattcaccgagacctgaaatcaaacaacatcctacttggggaggacatggaaccaaaaattgcagattttggattggcaaggctactagaagaaggtcatactaatactcggacaactagaattgttggaacattgtaagctcatgtgcataataaaaccttcactcatagagatattgaatgtgcaagcctaatgcttatcctctgcagcggttatatggcacctgagtacgcaatacacggaaatgtgtcaaccaagatcgatgttttaagttttggtgtgttggtccttgaaattgtaacagggagaaggaacctcaattctgacgatcatgatcgcgggaatctccttagtgatgtaagtgctcaataaggttgagcttgctcctgtacatatatacttttagtgcatttacatactgcaatattcatgatatcatacccgaaagtactctatatcaagttttagataacaaactaatttcaaatcgtctaacaggtctggaattgctggacaaaagggacggttacacaactaattgaccaatcacttgaagagcaattccgaagacaagcactgcgatgcattcatatcgggctgctgtgtgtccagtcagatcctgatgacaggcctcacatgtcatctgtcattttcatgttgagtagggaaaacatgaatcttcagccaccggcacaacctgcattcttctttgatggagactcaaactcatgttctcaaccctttgagcaacccgtgtataatcggcctaatgcaatctatgaagaggatatctccgtgaataggatgacagttactgacatataccccagataacccttccccctccccattcctaatcccccctttcccagtggcgcaattgtcaccattgtttgtcaacttcattgaaccatctgcgtatggtttgatctgcaccttagaaggcacatttaaatattctagttgttgtcattacattatattcttatatggccagttatcttatgttctttgcacactc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0537900, RefSeq:Os07g0537900