Os07g0585100

From RiceWiki
Revision as of 20:39, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0585100

Description

Armadillo-like helical domain containing protein

Version

NM_001066658.1 GI:115473048 GeneID:4343743

Length

7441 bp

Definition

Oryza sativa Japonica Group Os07g0585100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24413265..24420705

Sequence Coding Region

24414399..24414524,24415446..24415607,24415720..24415838,24416865..24416939,24418124..24418217
,24418593..24418652,24418820..24418888,24419194..24419292,24419938..24419982
,24420076..24420178,24420402..24420460

Expression

GEO Profiles:Os07g0585100

Genome Context

<gbrowseImage1> name=NC_008400:24413265..24420705 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:24413265..24420705 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagggcctcttcaagtccaagccgcggacgccggcagacgtcgtgcggcagacgcgggagctcctcatcttcctcgacctacactccggatcacgcggcggcgacgccaagcgcgaggagaagatggcagaattaagcaaaaatatcagggagttgaagtcaattctttatggcaatggtgaatctgaacctgtgactgaggcttgcgtgcaattgacccaagaattcttcagagagaacactttacggcttctaattatttgtcttccgaaattgaacttagagaccaggaaagatgcaactcaagttgttgcaaacttgcaaaggcagcaagtctcctcaaaaatagttgcatctgagtatctagaagcaaataaagatcttttggacaccttaatttctgggtatgagaatatggacattgctttgcattacggctctatgctgagggaatgtattcgccaccaaagtattgcaaggtacgttttagagtctgaccacatgaagaagttctttgactatatacaacttccaaattttgacattgcatcagatgcttctgcgacctttaaggaacttctgacaaggcataaagctaccgtggcagaatttctgtcaaagaattatgactggttcttttcagaattcaacactaggttgctatcatcaaccaactacataacaaaaaggcaggctatcaagttcttgggagacatgctgcttgatagatccaactctacagtcatgatgcgttatgttagttcaaaagataatcttatgattctcatgaatctcttgagagattcaagcaaaaatattcaaattgaagcatttcatgtgttcaagttatttgcggcaaataaaaacaagccaactgaggttgtaaacatactagtcacaaaccgaagcaagcttctccgattttttgccggattcaagattgacaaagaggatgaacagttcgaggcagacaaagagcaggtcataaaggagatatctgcactttag</cdnaseq>

Protein Sequence

<aaseq>MKGLFKSKPRTPADVVRQTRELLIFLDLHSGSRGGDAKREEKMA ELSKNIRELKSILYGNGESEPVTEACVQLTQEFFRENTLRLLIICLPKLNLETRKDAT QVVANLQRQQVSSKIVASEYLEANKDLLDTLISGYENMDIALHYGSMLRECIRHQSIA RYVLESDHMKKFFDYIQLPNFDIASDASATFKELLTRHKATVAEFLSKNYDWFFSEFN TRLLSSTNYITKRQAIKFLGDMLLDRSNSTVMMRYVSSKDNLMILMNLLRDSSKNIQI EAFHVFKLFAANKNKPTEVVNILVTNRSKLLRFFAGFKIDKEDEQFEADKEQVIKEIS AL</aaseq>

Gene Sequence

<dnaseqindica>1135..1260#2182..2343#2456..2574#3601..3675#4860..4953#5329..5388#5556..5624#5930..6028#6674..6718#6812..6914#7138..7196#accgtagtgactagcgagcgctgagtgcatcaccggccaagcagccaagcggcggcggtgccaaccggaggggcggcgaggcttggcgctcgcccgcgcaccaccctcctcctccccccgaagaacggcaagcgccagcgatggagtagcttggtggcggagggcttgatggcggaggagctcggtggcgagacggcccgagcggcgacggcgccgggcagcgacaacgacggcgacgccagcctcctcttctccttccccgctctcgcctcctcctcctccagcccgtcgactacctcgcccctttcccctctatcctctagcatagtgtgggtcccgcttgagacgtgaagaactcgtagccaaagttggctactcggacctgagcaagctgcacggtttgacgatgtggcatggaatattcgtttttgggtgtggaggctgaatgccacttaagcccactgtgaatggccatggcctaggaggacatgtctaccgcagcggataatcgaggccgttgattgctgatcccaatgacaggtggaaatatttctctggtcgatgattgcgttgattcgtgttcaggcaaaggccgctgaatccaaagcggatcacagaattggcacgcacagaaagataacagttaaaaacgaaggagaaaaaaaaagttgggagaaaagcggagcagggaaggagacaggggagaagcgtcgagaaacgcaccgccccctagccctaggcttgcctccttccgcgccggtgggtgggtggataggggagtaggagagggggatctcggccaccgcccaccgccaccgccgcgccgccgccgcgcgcgcgcgcgcatcgcgtcacgatctcgcgagaccccgaaccccacgaaccctcgccgcgtcgccgcgggccgtcgcggtgggggaggaggaggaggggtgggtactcgttctcccagtgggggagggttttgccgcggcgggaccagtggcgctgttccggggctgcttctccttcgggtcgggggggcggaggaggcccgccgcctcgcccctgccctcgccgccgcgggcgccgccgctagcctcctccgcctccgccgccgccgcggcgctagcggcagcggacgacggcgccaagatgaagggcctcttcaagtccaagccgcggacgccggcagacgtcgtgcggcagacgcgggagctcctcatcttcctcgacctacactccggatcacgcggcggcgacgccaagcgcgaggagaaggtgagatcgaacacgcagttgttactgttttttttgctgccccatcccccttgctgcgcacattcgtccccgatcgctcatgagagtggaacctttttacctaattagccatgattcgtgctctgttccttcaatttgatgtaacttatcataaatgcaatagatgcgagcctgcgatatgctggtatatgagtttagtctacttgcttttggcagcagatttgttttccccgtgaggttgtgactattaagatggtataattatatcgatgtgatccggaatgtacaaaactaaggggtagtctatgtaactccatgatatacatttttggcatatgacacaattacggcatttttcgaaaacatgcatttcagttcataggaagttgatattaatttcatatgaatcagatctttttcagcatgaacaggaaatttctctgttccacggagacccataggctgcttaattatgactgtttatgcaattatgataattggatagataatcaattggcctgcagttgtaactcagtgtaagattctcagtgtgtcggtggtcatctacaaggattaagctatggctcttatccgtggtactaagatgccatctcaaattaaataatgctgagaaaattcataacctcctcgactatgtagactgtttaatccttggcactacttaccgctatgtgtttgcctgtaaaagctagttgatggaatgttctcttagcatttaataatgcctttatggataaagcttattgatgaaacgtgcactggcataatgatgttcaaatgattacttcaatattattaactattatgaatttttgggtcaatttattctgtaaacaatacatatgaacttgaaaaatatattcctatatgttatgggcagctaagaccatgtttatgcagatggcagaattaagcaaaaatatcagggagttgaagtcaattctttatggcaatggtgaatctgaacctgtgactgaggcttgcgtgcaattgacccaagaattcttcagagagaacactttacggcttctaattatttgtcttccgaaattgaacttagaggtatgcaactttattttgtttttggtggattgcgatggtactggtgatacatgtactgttcttattgctactgtttagatggctaacttattttaatggatatatcttgcagaccaggaaagatgcaactcaagttgttgcaaacttgcaaaggcagcaagtctcctcaaaaatagttgcatctgagtatctagaagcaaataaagatcttttggacaccttaatttctgggtgagtctaatatgcaagtaaacaattacagaacattatttcatttccttttataaaatatttggccgtatcatgtttgtttagctgttcttgctctttttgcttcttagtggcttggtgccacattgcctctcaggcgctttctttggcctctgtatacttgattggccatgtgttccatatttagcgcgctggatttaatgctcaataatagttaaagtaaaactagttgtccatatgaagacatctagatggatattccatctttaaattacgaaactggatgcacgtatgttacagtatttcattagttagttaaggtatatcagaaagtacttacaaaccatttcccctgggtttctttatggttgatattgtacataatatgagtcagtatataacaagtgacgttattccaatattccagtaacactactgcaataactattatgtccagttcttgctttatgccatttctagtggggataaaaaaaatcaaaccgtgaagggaatggttagcattcgcaccatgcccactgggggactcggaccatggtagtggaagaaaaggcgaaactaagtgttcgtttgaacaaacccaaattcaggacatggtaatgggaccagcttctttgatctgcacacaagggaaatgattcatgtattcaaccccacattaccatgtatacctgtggctgatcgtctgatccctgtcaaattcagcccataggtcccaccaactgaacaaatacagtacaccaatcaggccatctgattgtggggcctgccttttgcacaatggtttgagctagcactaattatgcacgttcatatttagatttgacaataactgtgtaaaacaattgacttgacggtatgccatgggaatacagcaaatatggttaatgtttaccttttttagcttgcagtagccacatgattattgcattccaaatatttcttatgtaccgttattgcttcagactagctttgcttattttgcctgttattttcactacttaccaggtatgagaatatggacattgctttgcattacggctctatgctgagggaatgtattcgccaccaaagtattgcaaggtgacattactgaactgaaattgataaccattatgaatcaaacatcagaaaacatcatgtcagcaaaatccatcatccctgtgagcctatcaagtggatatgcaagcactaagtttgtattggagtggtgtgtcacattaaaattgttatttattttgtgcctatgaacctatcaagtggatatgcaagcacatttaggccctctttgtttagtcttataagccagcttatgagccgaaaggtctagcctaaacaaacaagcagctttttcgttgccataagccactctttacactgttaagacaaatgctaggttggagtagtttttgttgcttatgtgaattggaggtatgactccatcattaaacaggcttcaaagccacaggcttataaaacatacaagccaaaaaattggcttaaaagcctaagcctaaacaaagagggccttaaatttgaaatttattttgtggaaacctgcacataacccttcatatctcgaattattattttttacactggaatttcatgcgctgtatccaaatattgattcaagattcttttcttcagttgatatattgtgtacccatttaagtgaaggaatgcataattaacagagaggcccgattcatgtgaatggttattgtagtttacgtgctgtaggcccatagcactatgatgatctgttaaatgtttgttctgtgatttgtttgatgttgtaactttttccctagctgtttattgttaagctttttttttataacctctgttcctgttctaaatattaattgatactccctccgtttcaggttataagatgttttgactttggtcaaagtcaatctgcttcaagtttgactaaatttatagacaaatatagtaatatttacattatcaaattagttttattaaattaataattaaatatatttttgtaataaatttatcttgggtaaaaaatattactattttttctataaactcgattaaacttgaagcagtttgactttgaccaaagtcaaaacatcttataacttgaaacggaggaagtagtaaagcgtaagataatagattacatatattatcccaactaaggattctgttttacataaaccataaaatactgtagaaattagaaattcctgtcggaatggtgcttatttatcttggtaaatgttcactcacaggtacgttttagagtctgaccacatgaagaagttctttgactatatacaacttccaaattttgacattgcatcagatgcttctgcgacctttaaggtgatttgctgaagcccgccctgcaaaaagtttgttgggttttcttcctcttttcctaacttatatgcctgaattatactaagaatgttacataggttacatataacatctctatgtccactggccgctggtatcactatattttacttttcttttccaaaagtcacgttgataaaaatgtggcaattttttttccattaaaacttgattcaggctgcaatattcacaacttgttgctgcgaggaaattatttgatgccttggatttttagtgaagtgcaggagcacacttgctttcttggctaatatttttcatccccttgttcctttttcatacgtgtcttcttgtgtgatcatattgatttactcaaaacaggaacttctgacaaggcataaagctaccgtggcagaatttctgtcaaagaattatgactgggtgagtatttttacttggcatcatcattgttaatccatgtcgatgtacaaacactgttgtatcctgctttgtatgccacttataattcagttagtgtatggtttaaattgtaacatcttttctgctattgtagtctcatgtctttatcatctttctttcttctgcagttcttttcagaattcaacactaggttgctatcatcaaccaactacataacaaaaaggcaggctatcaaggtattgctattctgttacatgtgggtttatctgtgatatgtctgcatgtacggatctgccttctcttggaacatgaaaagtgatttggatctgccttctcttggaacatgaaaagtgatttgcatagcttatcatgcttgattcactactattaattgctgtttgacaactcacacatgcatatacacttttggtgtccaaagatcttttccttgtaaaagtactgttttattttgatgctgtgagtacactgtacactatgttttctaattttctgaagttaatatttacttttcccccttcagttcttgggagacatgctgcttgatagatccaactctacagtcatgatgcgttatgttagttcaaaagataatcttatgattctcatgaatctcttgagagtaagttcactccacttgaccttataattttagaatgcaacgtgcaactttatgctttcatgatttgacgtacctgcaaacactagaaaatatcaccaaatcaccattcccatgtcccatcaaatccttgtattctgcagcttatgatgatgattatgattatacattaaaatttctttggaccatagttttcggtaaagatagctgttaagatgaaaacccagctgatagtctacatttgtcagtgtcacacattaaaaaactgtgcgctaaagggatgttgaagaatgctgtcacagccacacggatttattgatattcctagcaatacattaatcacaacaaatgtattgcaaccatgtttatttctctgtttctggagctgtcaacacatgatccagttctgatgattcataggtttcaaaccaaaatttgcattgaactcaatcttgagcctcaaagccagtcaaccttctaagctgtgtgacctatgtagaatcgccattacattttacagaaaaaaaccaatacttatcctcttgaaataatggccccaagattattcaaatcaaggcatttcagactatcagcatttttctttctgagaaattcatattatcatggattcatctcttgaattttcaggattcaagcaaaaatattcaaattgaagcatttcatgtgttcaaggttagtattaatactctgcagatttattcccagtaaagcaggtgatgtttatttgaactcaggtatgattattacatttgctacatactgcagttatttgcggcaaataaaaacaagccaactgaggttgtaaacatactagtcacaaaccgaagcaagcttctccgattttttgccggattcaagattgacaaaggtgctttactacctattttaacacctgttacctcaatttttacacttgcttgcttttcttctgttctcaagactgcatgttcaattcatttttcatttttcagctcttgagctggtacaaatcatatctattaagctttcccactgtagctgttcatcaatgggatttgatatgcctctatatcatttgcacatgagctaatagcagtgttatggtttatcagaggatgaacagttcgaggcagacaaagagcaggtcataaaggagatatctgcactttagtgtccttctgtatacctcgcggaggcttttggtcaatgcgtctgcctagtggtctctcgtggactactgtatttatcccaccccgagaggctttcgcatggatggattcaccgcgagtatattaacgcggtggccggtggctggatggtgttgctgggtgatttgttagaaggttcttgtgtaataatatacttctacatattgctatatgttacttggattcaggcaaatcatattgatggtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0585100, RefSeq:Os07g0585100