Os07g0598900

From RiceWiki
Revision as of 20:39, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0598900

Description

Cobalamin (vitamin B12) biosynthesis P47K domain containing protein

Version

NM_001066720.1 GI:115473172 GeneID:4343807

Length

5001 bp

Definition

Oryza sativa Japonica Group Os07g0598900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:25106446..25111446

Sequence Coding Region

25106448..25106645,25107419..25107636,25108077..25108191,25108342..25108431,25108594..25108752
,25109199..25109318,25109910..25110020,25110107..25110188,25110268..25110323

Expression

GEO Profiles:Os07g0598900

Genome Context

<gbrowseImage1> name=NC_008400:25106446..25111446 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:25106446..25111446 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttctcgaggcttctgtttcctcgtctctcgtcgtcgtcggcggcggcggcggccatggaggacgacgacgagtgccctcccctcgccgtcgagctctcgccggagaagccgtacagtcctccgccgctcggtccctccgcggcgtcgccggtcggagtcaccgtcatcactggctacctcggcgccggcaagtccacgttagtcaactacattctaagtgcgcaacatggaaagagaattgcagtgatattgaatgagtttggagaggaaattggggttgaaagagcaatgatcaatgaggggcaaggtggcgcgcttgttgaagagtgggtagagctggcaaatggatgtgtttgttgcacggtgaaacacagcctggttcaagcacttgagcagcttgtgcagagaaaggagagaatggatcacatattactagagacaacaggattggctgatcctgcacctcttgtctctattctttggctagacgaccagttggagtcatcaattaaactagactctatcattacggttattgatgcaaaaaacttcaggctgcaaattgatgagcacaataagtcatcatcattccctgaagcatttcatcaaattgcatttgcggatgttgtgatattgaacaaaattgacctagtagaaggcagtcttgaggatttggaaaggcagattcatgaagtcaacgctcttgttacagtggtgcagtctgtccgctgccaggttgacttaaataaaatatttgatcagcaagcatatggtgccaagaattcatcgcagctgcaagaacttctggagtacagtaaatcagtaccacctaatctccgtcatgataacagtatttctaccttgtgtatttgtgagcaggatccaatttccctgtctaaggtggaatcatggctcgaggatcttctttgggaaaggaagttggacatggatatttatcgttgtaaagggattttacatgtccataactcggatcaagttcatacattacaggcagtgagggaagtttatgaagttctgccagctcgagaatggtccaagacagaatctcgcacaaacaagatagttgtcataggtcgcaacttggatatcaatatccttcaagattcatttagtcgttgcaagcactga</cdnaseq>

Protein Sequence

<aaseq>FSRLLFPRLSSSSAAAAAMEDDDECPPLAVELSPEKPYSPPPLG PSAASPVGVTVITGYLGAGKSTLVNYILSAQHGKRIAVILNEFGEEIGVERAMINEGQ GGALVEEWVELANGCVCCTVKHSLVQALEQLVQRKERMDHILLETTGLADPAPLVSIL WLDDQLESSIKLDSIITVIDAKNFRLQIDEHNKSSSFPEAFHQIAFADVVILNKIDLV EGSLEDLERQIHEVNALVTVVQSVRCQVDLNKIFDQQAYGAKNSSQLQELLEYSKSVP PNLRHDNSISTLCICEQDPISLSKVESWLEDLLWERKLDMDIYRCKGILHVHNSDQVH TLQAVREVYEVLPAREWSKTESRTNKIVVIGRNLDINILQDSFSRCKH</aaseq>

Gene Sequence

<dnaseqindica>3..200#974..1191#1632..1746#1897..1986#2149..2307#2754..2873#3465..3575#3662..3743#3823..3878#agttctcgaggcttctgtttcctcgtctctcgtcgtcgtcggcggcggcggcggccatggaggacgacgacgagtgccctcccctcgccgtcgagctctcgccggagaagccgtacagtcctccgccgctcggtccctccgcggcgtcgccggtcggagtcaccgtcatcactggctacctcggcgccggcaagtccacggtgagcttttctccgcaggctgtgccctccccgcctccccgccccatgctctccctgcaaagtgcttggaggattgggggcgtcagattactggaactatgtaggatccgagattggtctacggaagattcctggaggactggagttgtggctggtagtttgatccgatcgagttgcatacttgcctgtcgccatagctcttgctgttttcttaggtttaggtagttctcaacatgctgggttggttggagcagtgtccttttctatttggtgagctgtcatgtgactcgaactcgcttcgagggcttcgtttctcataggagctcattttcaatttatttgtagttctagtagtatataagaaaaggttcatcgatctacatgttgaactagtaaccaatcaattttgaactgtagttgaatgttatatcaccaagtggagtaactagttctctttctttttttagactaaacttaacattaccgagttactcatggataaacacctttttcacagttgatgatatattgaggatttatacatgtgtttagtactattttatcccgtgcttttttatcaaaatgaatctgtcagtggctgtttactatttagcttatgttgacatttgtttctactatgtctcaccttaccactctcctagcagaacctgtacttattgaccaagtgtcctgtgaactttataatccagtttgttagttcaactaattggtatgttatgggataacttatctcccgcacatcaaattttcagttagtcaactacattctaagtgcgcaacatggaaagagaattgcagtgatattgaatgagtttggagaggaaattggggttgaaagagcaatgatcaatgaggggcaaggtggcgcgcttgttgaagagtgggtagagctggcaaatggatgtgtttgttgcacggtgaaacacagcctggttcaagcacttgagcagcttgtgcagagaaaggagaggtaaatacggatgttgctgtcttgcatggatatgtagcatacaccatttgatcctataagtatgtgtcctactattatgttttattccctatgattttcagtacaaagtgatgtcatgatgtataaagacttagtgatatgttctgatttgctattgatattctggttttagctcaaaactatgtttacactctggcattttttggttagtccacatggttgtttgtttgttctagttcttctggaaatagtaaaattttgattcactttcctgtgtatgctatgtactgatgcaaaaatgtaaagtggatcatgctcttactttgatctttcattaaagaagattggtgttttttttttctgataacattagtagtttcattatactacagtgccttgtaaattacgacggtatgaattgaagatactatgtgctgcagaatggatcacatattactagagacaacaggattggctgatcctgcacctcttgtctctattctttggctagacgaccagttggagtcatcaattaaactagactctatcattacggttagttcaaccttatgttcttatttgttagtctgactatatcttacaagttcgggaaatgtgcctgcttctttggtccttactttggataacagtttgaaggactgcattgtattggacaattttcttatatatatatttactggtcaggttattgatgcaaaaaacttcaggctgcaaattgatgagcacaataagtcatcatcattccctgaagcatttcatcaaattgcatttgcggtaacttggtcctcagtgttatcctatttgtaccattttgtcttcactacagaatttggaattctttgtgctgattttgtggttctgaaatttgtcttacttgatgaatcccaaaatgcaaacaaccataataacaaaagtgtcaaaactttcctggaccaggatgttgtgatattgaacaaaattgacctagtagaaggcagtcttgaggatttggaaaggcagattcatgaagtcaacgctcttgttacagtggtgcagtctgtccgctgccaggttgacttaaataaaatatttgatcagcaagcatatggtgccaaggtcaatacctagctcgaaacttgcattttgttatttctttgtattcaatgcagaggaatctgtctttgattttgtttttggacaaaaaaaagactaactttgattagttaattgattaagtatgacatcaattagtcatgtcaacatatgggcactaaatctagtcatgccaagacatggaaactaagttattctcaggtcattaaactctatggcacttcttaacaaaagctcgaatcattcagcacgaaaaatcagtgttggtgagacgttttttcagcatctgcttgctcatgctaactagcaatacagaaatttgcttacttgcttttggtacttattttgtagttattgcttttgctggcgatggcaccttgtgctcaacaaaatctgaacaccttattcagggatttgattctgacatgtttttaatttattttccatagaattcatcgcagctgcaagaacttctggagtacagtaaatcagtaccacctaatctccgtcatgataacagtatttctaccttgtgtatttgtgagcaggatccaatttccctgtctaaggtactcttccattagagttttttttaactgcagttaacatttagaaaacatttcccttggacaactttgaaagggtatttattcattaatcttaaaaacatagattttggttgacaactacatcattgggatttgggatatttagtttttttttctgtactcacccattgttctgttagtactttgaagtacatgctcttatgtttcacctacttttctaaaatatgtcttcacattccatactgcttaggttgatttgaaaagttacaatgaacaagtgattgcaagctctacactcacttttcctggttgatgctacagcaacaactggaaacattatttgattaatattgccccttgaagtcttcatgttgagatagatgtgttatatgtcatgatttcaaagatgatcatttattgggatctgtgaaggatgctccatattctgctctactatagagaagagtagaagtctgtttaatattcaagcacatacactgcatttcctaggtttctccgttcatgaccaatgaacaccgatatacaattgtgagatatatgcatttttgtttgatttaatttgttctgaaggtggaatcatggctcgaggatcttctttgggaaaggaagttggacatggatatttatcgttgtaaagggattttacatgtccataactcggatcaagttcatacattacaggttgttgcatcataaaaagtattctcaagaatcatacattatgagttttcaaacaaatattatcccacctgtttgctctcatgcaggcagtgagggaagtttatgaagttctgccagctcgagaatggtccaagacagaatctcgcacaaacaagatagttgtcataggtatatttcgtaactcactagtttagcgatggcaacttatgaattgtttattaattatcatatgcctgtggtgctgcaggtcgcaacttggatatcaatatccttcaagattcatttagtcgttgcaagcactgatatcgaagggtttgttcatcctgtaccctgtaagttacattctgttttttggggttgtttgtgtgtgtgtatatacatacatacatgcatgcatgtatgtatgtatatatacatacatacatacatacatacatacatacacacacacatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatagtaaatttgtttggtgctccatggtgcccgggcactattgttgaaattgagtatatacccaattcaaatgagtatgaaactttttcaattacttaggtattaacattaactactttactaactagtttaaagcaagtttgaactgaatttgaacttgtttttgttagattttgattctaggtatatagcatccatacatataattagttaggtatgtaatcatggattgtgaaataaagttaaatttgagttgttttgttgataagtataggtatgaatcaaattattataactaggtatatactcacaatttgaaaattttgaaaaaatttgagtaattttgtgcattagataccatggtgcccgggcaccatggtgccccatatgagtgtcatatatatatatatatatatatattagtctttcagtcttgctgtttgaggttctgtcccatcaatatacttaggagtatttgctgcttgggacttgcagctgacaaaatattagcattttaatgttgttcctgcactcaacaggcacctccatgcaatcaaatactgcaaggagtttctatggctccccgaagtaatgtgctttatgtttgtctgtatatcttcaaaggtgacagtgctgacagcttcttggcaatgaagttctgcacaacggatgcgattatccgacgcgccatgttcaactttggaagaggaacatgcatccagttacaagatgatgaactacttgtagaagattttagttaagagtagtatgcaaactgatgatcggcaacatttctcgttgtatggaactgaccgaaagcaatctttttgtaagaaaccgattggcaacaataacatactgggagttgaaatctgatcctcaaattcatgtttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0598900, RefSeq:Os07g0598900