Os07g0603500

From RiceWiki
Revision as of 20:39, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0603500

Description

Peptidase A1, pepsin family protein

Version

NM_001066748.2 GI:297607582 GeneID:4343838

Length

2008 bp

Definition

Oryza sativa Japonica Group Os07g0603500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:25346027..25348034

Sequence Coding Region

25346027..25346074,25346772..25347186,25347594..25347775,25347942..25348034

Expression

GEO Profiles:Os07g0603500

Genome Context

<gbrowseImage1> name=NC_008400:25346027..25348034 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:25346027..25348034 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacgcggctgcggtggtggcggcgacgggcgacgcagcagcagtggggggaggacctgcgggcgggcagtggtggaggggcggcggggctcggcggcgaggcgtcgctcggccggagattctcctgctgcctcgtcccgcactccgtcaacacatcgtcggcgctcaacttcggcaccctcgccaacgtcaccgagctcggcgcagcgagcacgacgctcgtcgccggggacgtggacagtactacagcgtggtcctcgacttcgtcaaggaagcaaaccgaacaagcgagtccggacttgacgctggagttcggcggcagcggcggccgcgcggcggtggcgctgaagccggagaacgcgtccgtgacggtgcaggaggggacgctgtgcctggcaatcgtggcgacgacgaagcagcagccggtgtccatcctcgggaacctggcgcagcagaacatccacgtcggctacgacctcgacgccggcacggtcatcttcgccaccgccgactgcgcggggagcggccagccaacggagcagacgagcggcaggcaggcgcgctgcgggagaggaagatggcgccgacggggagcgggacggggggagcgaggacgtcgccgccgtcgtcgtccatggccgctgttctcacgcccgcgccgtcagcggcgtcgcccgcgggagtgtgttcagggtcaaggttcactgatcttaatcagtccatctaatgagtga</cdnaseq>

Protein Sequence

<aaseq>MATRLRWWRRRATQQQWGEDLRAGSGGGAAGLGGEASLGRRFSC CLVPHSVNTSSALNFGTLANVTELGAASTTLVAGDVDSTTAWSSTSSRKQTEQASPDL TLEFGGSGGRAAVALKPENASVTVQEGTLCLAIVATTKQQPVSILGNLAQQNIHVGYD LDAGTVIFATADCAGSGQPTEQTSGRQARCGRGRWRRRGAGRGERGRRRRRRPWPLFS RPRRQRRRPRECVQGQGSLILISPSNE</aaseq>

Gene Sequence

<dnaseqindica>1961..2008#849..1263#260..441#1..93#atggcgacgcggctgcggtggtggcggcgacgggcgacgcagcagcagtggggggaggacctgcgggcgggcagtggtggaggggcggcgggggtaggagcagcgcgcgggctcccccgccggccgccacccacgaggcccacaaccacgaggcggcgtgtgcagcgtcaagttcggctgctccaccacgacggccggctcgttcccggccgacgggctggtcgggctcagcggcgacgcggtctccctcgtgacgcagctcggcggcgaggcgtcgctcggccggagattctcctgctgcctcgtcccgcactccgtcaacacatcgtcggcgctcaacttcggcaccctcgccaacgtcaccgagctcggcgcagcgagcacgacgctcgtcgccggggacgtggacagtactacagcgtggtcctcgacttcgtcaaggtcggcaacaagacggtggcatcggcggcgagctcccgcatcatcaatgcaaaaataagctttgttactcctgcaaattgcaagtgaacagaacaatctcaagctaagttgttctttaatcagaagaacaggatatgaacaagcagaatttcaagatattttgtggcgtcggtttcgctttcttacctcgctatagattatgtgagagatcaaattacatgacccataaattgtagagcaatgcaggagtaacactcccagctaagaaattggttgatgtataatactccgatcttctatcttcgttaggcgatgcaaggagaattcagaattctcaccaacagccagcttgctagaatagagtatgagttactgatcttgaatgacctcatgtgtacatccaacaggaagcaaaccgaacaagcgagtccggacttgacgctggagttcggcggcagcggcggccgcgcggcggtggcgctgaagccggagaacgcgtccgtgacggtgcaggaggggacgctgtgcctggcaatcgtggcgacgacgaagcagcagccggtgtccatcctcgggaacctggcgcagcagaacatccacgtcggctacgacctcgacgccggcacggtcatcttcgccaccgccgactgcgcggggagcggccagccaacggagcagacgagcggcaggcaggcgcgctgcgggagaggaagatggcgccgacggggagcgggacggggggagcgaggacgtcgccgccgtcgtcgtccatggccgctgttctcacgcccgcgccgtcagcggcgtcgcccgcgggagtgtgtgagcgcggggcagcggcgggcgaagcaggcggtggagggcggagcgggcacgacgccgaagacagcttcttcccgcgccggcgccaccggccgcctctcccttctcaagcgtcgccgccgccgccgccgcctcccttatcccgtgtcgtcgtcgccaccgccgccgccgccaccgcagccgcctcccgggcctctccgacggtccgaccccgaggtcgcacgcgccgccgccggctgccggacctcctccccatccgccagccgccctgcagagaggagagaagtgagagggagagatgaggaagggagagaagaggggggagagatgacctgtcattctgacatgtggggtctacgtgggttccacgctgactcagccgccaccttagacaaaaccggggtcaaaaccaccagatgatctaaaggaacggttttgttggttgagggacgtccggtatctagctttgtagttgggggacgattttgtaactcgataacaagttgagggaccttgggtgtactttttccaaaatttcaagcgtggacttaggactagtaacagttccatcgtggccttaggcccaataacatcaaatgggctagcctacactccgttgggttaatgggccttctccttctcctactcggccatgatttctcctgaagcttttaataaagttcaacttttgtttcaggttcagggtcaaggttcactgatcttaatcagtccatctaatgagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0603500, RefSeq:Os07g0603500