Os07g0662800

From RiceWiki
Revision as of 20:41, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0662800

Description

Aromatic amino acid permease family protein

Version

NM_001067081.1 GI:115473894 GeneID:4344191

Length

6521 bp

Definition

Oryza sativa Japonica Group Os07g0662800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:28611099..28617619

Sequence Coding Region

28611742..28612004,28612192..28612276,28612358..28612505,28612746..28612798,28612872..28612973
,28613480..28613549,28613693..28613749,28614068..28614157,28614338..28614387
,28616479..28616511

Expression

GEO Profiles:Os07g0662800

Genome Context

<gbrowseImage1> name=NC_008400:28611099..28617619 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:28611099..28617619 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgtgaactaggatctggaggtgtctccctggtctcaatggctatgcgcactctagggacatttggagtaagaacagcttgcatctcatatttgtttatacattatgcacttctggttgcatatgtggcacgctcttcagagatcataacaaactcagtgggcattccattatgggagagtgctgccctgttttcactggcttttggggggctatgctactttggaagccagcgagtcattggtgcggttaatggttttttggtgttcagcatcctagcatccttcacaactcttgtggtggtggcaagtggaaacctgcagtggagttctcttcttgaagcaaattttgctgctgccccacaaagtataccgataattgctctttcatttgtataccagaatgtagttcctgttctgtgtacaaatttggagggagacctatcaaaagtaaggaaggcaattgtagtaggtaccgccataccccttgctctgtttctcatatgggatgctgtaatcctggggacacttccaggccttgcaggggatggaaccattattgatccactagaacagcttcgatcaagtaatggaacagtggggcctattgttgaggcattctcatttcttgcaattggcacatcatacattggatttgttctaggactctcagacttcatagcagacttgcttaaactaccaagtggacagaacaaacctctgccgtaccttctgactttgctcccaccgcttgttctgtcattgcttgatccagagatatttttcaaggcattggactttgcaggaacttatggaggcaaggatccttttaaactatctcttattatgaatagatgtagagaagaaacatgtatagtcctatgctattttaaaatttattttactagaagacttgtcaagttgtcatgcaatgaaaccaaccaatcatga</cdnaseq>

Protein Sequence

<aaseq>MCELGSGGVSLVSMAMRTLGTFGVRTACISYLFIHYALLVAYVA RSSEIITNSVGIPLWESAALFSLAFGGLCYFGSQRVIGAVNGFLVFSILASFTTLVVV ASGNLQWSSLLEANFAAAPQSIPIIALSFVYQNVVPVLCTNLEGDLSKVRKAIVVGTA IPLALFLIWDAVILGTLPGLAGDGTIIDPLEQLRSSNGTVGPIVEAFSFLAIGTSYIG FVLGLSDFIADLLKLPSGQNKPLPYLLTLLPPLVLSLLDPEIFFKALDFAGTYGGKDP FKLSLIMNRCREETCIVLCYFKIYFTRRLVKLSCNETNQS</aaseq>

Gene Sequence

<dnaseqindica>5616..5878#5344..5428#5115..5262#4822..4874#4647..4748#4071..4140#3871..3927#3463..3552#3233..3282#1109..1141#agttgcagacgaagaacaccggcaatggcgttaactgcttctcttcgctgctaccctctactgggctcagcagcagcagcatcatcgtcagtctcacttccggcctccacaagagcgccggtgcttcacaggacaacaggaggaccgaggagaaggctgcaacgatgcctgtgctcgcagcagtacgccgagaagcagtcatccggctcgcagcagcagcagcagaatcagcagctggagcgactcttctccaatctcaaccaggcaaccatgaagcacgaacctggtgaggcgcacaacatgcttctctcaacttccttgtgcgtatttgttttgcctttgagatgcacgcaccgtaatggaaccgttcctcatttggatgtcagggagtgtcaccagttcgatcttccttgtggccggcactacggtaatgttcgtcttatcatccttcgctgcaagagataaaatatttggattaggaattgtgcattagtttctctcatttcaagcaattgatgatgaggctgcaggtagaatttgtgttcaaatgaaatgtacaaagacttgtaagaatgagaaatcataggacagttgataatctgacaaaggccagcctttcacagatcatcaaacactgctttaagaaactacaaaaacttatgaaaaattgagcgcacctgatttttcttttccgacacgaactgatgccacaggtaggggcgggtatccttgcaatccctgcagtgacacaagaagctggattcttggcctcagcagttacatgcatcttctgctggatttatatggtaatagatcgtcactgactgggtagattatcaaaaccgacttgttagaggtgacatgcactcagagaagcctctcaaaggtacattctttcacatttcacattcctgcataaattcttctcataaaggaagtgattcaattttgtatctgttatgtcaccctgatacaggacggttttgataatatgacccaatactctgtctagttcgttaatttgtttgcactccgacggtttatgtttggcatctcatttttccaggttgtaacagggttgttagttgctgaagtaaacgtcaatactatgtgtgaactaggatctggaggtgtctccctggtaattaatacattactcaagttatttttcagaaccaaaatttcttttaggaacaatcaagatgaatctttttttttcgtcgggaaggctgaaggaggccaaccgagtatattaagaaggagtaaaagttacaagaaaaaacatcaaatgcaccaaggtgcaatgccacacaccacgcactaccacccaagcacaaaccactgagggtgaagcctagcaccaaacgacccccgctaagcgtggccgaacgccgctaggccaacggcaacaccacagagacgaggctccgaaaacgatgccaccaaggtggtcacgacatccaggatgccgccatcgcccatctgaaaaagatgtggttttcacccagagaagctcgtcgagaaagggagagggtaaccctcgacaacgccccaaaaaggttacgacgcccgaagacgtagccgctgccggcccggtgaaccaccggactaggctttcgcctgggaccctacaaccttgactgcaggtcgccgtccaccaactcagaaccaccacacagacaaatggcagcacatagcatccaccacaccgcaccgacgcccctccgtcggccgacttcatcgagccaccacccctgagagctggcccaagacccctctgttccaccacccgccggccgcctcgccagttttggccaaaggagaacccgggactaggtggcattgcatcggcagcctgagcttcccccgctgacgagctgccgcctcaatccaacctagaaactccccgcaaagaaggggaggagctccaggaagggcgagggtgccgaccggcaacgaggaagacgacccaccgccgccagctcccttagaactaccatctggccgccggtggcgctgccgctccagaccggcgccacccgccagcgcccccgttatccggccacgcgcctcacctagccaccgcgacggcatctcggctgcccggccaggacgagtggggtcgccgctgctgcgtcgggcaggctgcgctgccagccgggcacgccaccgccgcctccgcgcgcggggtcggccacgccgagctgcggctgtctgccgccacagcgcccgggccagcctcgccaagccacagccagccgccgccctgccgcctcgccgccggccgcacgccgccgccaccacgaccgcacgccgccgcgctgggcgccgctgccgcctctggcagccggccgggccaccgccacctctgcgcgcgggtcggccacgccgagccgtcgccgagctgcggctgtccgccgcctcagcacctgggccggcctcgccgagccacagccagccgccgcctccgcgcccgagccgggccggccgagccgcagccgcctgccgcgccgccggccgcacgccgccgccaccacgaccacacaccgccacgccaccccaagccctcgcgccgccgccgcgcagatccaggtgggggatggccggatccggccttgggggcgccggatccgccgcctctccccacctcgccgccgcctcggaccgtgccggtgggggacttcgtcgtcttcgtcccgtccacttcgcgccgaggaaggaaacaccacgaagaaaaaggcctcgccgccgccttccctgctcgctgccggcttcgccgccggcgagctccaggggcggcgaggagcggggatggagaagaggcgcgggcggctagggttttttcgccccccgagccgcccgcgcgagagcgacgcggggagagagagaaaaaggacttaatcaagatgaatctgaaataattaaatttagctgaagagtagcatactacttccaagaggtgttaacgctgcatatgaatacaagtgttaatagatttggcaaatgatggaaaatgagactcaccaaacaatatcccaaattttgcactgtaactttcaatattacaatgttatatgatatgtactgaacaaaatccttacgacttcttctcaaaaaaaactactggatatgatattagtcaataattggttagaatttctctgcatacaattggattttgtgtgatttgagaatagcaactgtttcctctaaagactagtttttcttccaggtctcaatggctatgcgcactctagggacatttggagtaagaacagcttggtatgatggatttgatttaactaaagtttatttatgtgtaataaggcattggcatttaattaaataaaattataacatggaactccaaacataagagttcttatcctctctgtaatgaacctgcagatgcaacatttcatgaacagagaaagtctaacattgttttcaatgtgcctgcagcatctcatatttgtttatacattatgcacttctggttgcatatgtggcacgctcttcagagatcataacaaactcagtgggcattccattgtatgacttcttatcttcgttttcagttctagttcatcttctagctaaaacatttgtccatatcttttgttttgaaaggatgtacacatatgatcagtgtatcctttgacacattccacagcactgtaataaaaaaaatgctacggaatttacagaggttactacttcctcaaaaaattgtctgagtgcaagtgctagaattcttaatagatagtagtatttaacagtcattgagcatcactagtcaccagagcgtaattttctcagcattcagtaatgccttctcttgagccattgatgatgctattattattacagatgggagagtgctgccctgttttcactggcttttggggggctatgctactttggaaggtaaatatcataataggaaatagtcaaagtatctctcataatatgaaactctgtgcttagatacttaggcaatctatcatcttaaatcttacaccatcctgagaggtgataagcactacaactatttgtattgatgactgcagccagcgagtcattggtgcggttaatggttttttggtgttcagcatcctagcatccttcacaactcttgtggtaagtgtgcctatatatgctgcagattattaacatagttctgtaaactttctagcggtattcatatggaatttcatattcgcatgtcataaatatcaagtcatcgatgatcctagctatcagtgaagagaatgaaacgtgaacaaatttcctaaaaaataaggatgtatctatgcctaatcattatcagtgccgtttgcaaactacagtaacagatatagacgaaattttcaacctatgtcatatgaaaggaacaacatgaatgcaattctgtgtaggccagtcatccattcttacagatgtacaggttatatagtctacttgacaggaaatatggccgtctttcattcttttcagtaatatagtgattcctccaggctctagttatatagtttcaatatataaatgacaaagctaaagtgaccagatcactacgaaataagtaacacataatgaacaatacgatacaaagtataggtggtgaatagagtgtgtgaccttcgcaggtggtggcaagtggaaacctgcagtggagttctcttcttgaagcaaattttgctgctgccccacaaagtataccgataattgctctttcatttgtataccaggtaatcctactcaccgtgttcaatttgaatgaattaatattcttggtaccagactgagtattctccttgacagaatgtagttcctgttctgtgtacaaatttggagggagacctatcaaaagtaaggtaaggctgccaagaagaatctgtatgtaaaatctgaataaatacagaagttataaaagtactttcacacttgtgacaacagagcaaaattttaccttgttcagaacaaaagtattgaaaacaatcatagtttaattaatatggggcacacatattatgaattttcagttaatggccatattatcacatcctaaattgtgggttcaaaaggaatatgaatatccttgttgaatattgcaggaaggcaattgtagtaggtaccgccataccccttgctctgtttctcatatgggatgctgtaatcctggggacacttccaggccttgcaggggatggaaccattattgatccactagaacagcttcgatcaagtaatggaacagtgggggtaagtgcttcaagttgttcatacaatgttccatatttcacaaaaactgaggttaatttgaaaatgtctttgattttgcagcctattgttgaggcattctcatttcttgcaattggcacatcatacattggatttgttctaggactctcagacttcatagcagactgtaagttatcttcttcagcccagagcaatcacatttttcaactaatacgaggtctaaaggagaagctctccatttcatgagagagatacctgaaaataacaaaattactgtcaatattctcggactacttaatgctattaatccactatccctctttattttttgctacttttataaaacattgcagtgcttaaactaccaagtggacagaacaaacctctgccgtaccttctgactttgctcccaccgcttgttctgtcattgcttgatccagagatatttttcaaggcattggactttgcaggaacttatggaggcaaggatccttttaaactatctcttattatgaatagatgtagagaagaaacatgtatagtcctatgctattttaaaatttattttactagaagacttgtcaagttgtcatgcaatgaaaccaaccaatcatgacatttcagtcacccttttttttccattttgatacctaagaacttagcagctcgtttatttattccaatttgatatctaagaacttagcacctcatttacgtgttttttcacctaatcctaaaaaggaaataaaacagttttacagtttattggtggtgggtaaatgaaaaaacgtgagtgcttatctaggttcgtagcctgacccaatctgggttgaaagggaactcctagattagatttgccacttcagtacattaaattgatatcttatcaggagagaggaaaaaaaggaagaatgaactgatatcttgaatgtgctcttttcagttctagtactttttggagtttttccagcagctatgtcttggtcagagaggtactcagatgatctggaagctccagtaccaccaatagtcccgggaggaaaatttaccctctcatttgtcatggggggtgccttgctcgtaattttttcagagattttcaaggacataatgcagttgcaaggactacactgacacttagatctccaatatagatgcttcaacagattttcttttaaatgcaataccgctgatagcctcgtaatattgtacatagaattgactgagccagcttttcttaatttaattctttcacagtt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0662800, RefSeq:Os07g0662800