Os12g0139300

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Revision as of 10:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0139300| Description = Similar to Cytochrome P450 90A1 (EC 1.14.-.-)| Version = NM_001072649.1 GI:115487259 GeneID:4351461| Length = 3102 b...")
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Gene Name

Os12g0139300

Description

Similar to Cytochrome P450 90A1 (EC 1.14.-.-)

Version

NM_001072649.1 GI:115487259 GeneID:4351461

Length

3102 bp

Definition

Oryza sativa Japonica Group Os12g0139300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:1905097..1908198

Sequence Coding Region

1905291..1905393,1905536..1905672,1905787..1905893,1906012..1906090,1906256..1906342
,1906987..1907265,1907401..1908114

Expression

GEO Profiles:Os12g0139300

Genome Context

<gbrowseImage1> name=NC_008405:1905097..1908198 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:1905097..1908198 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcggccgcgctgctcctcctcgccgcggccgccgccgccgtcgtggttgccatggcgctcagatggctcctcctcctcgggggccccgccgccgggaggctggggaagagggcgcggatgccgccggggagcacgggcctgcctctgattggcgagacgctgcggctcatctcggcgtacaagacgcccaacccggagccgttcatcgacgagcgcgtggcgcgccacggcggcgtgttcaccacccacgtcttcggcgagcgcaccgtgttctccgccgacccggccttcaaccgcctcctcctcgccgccgagggccgcgccgtccactccagctacccgtcctccatcgccacgctcctcggcgcgcgctccctgctcctcacccgcggcgccgcgcacaagcggctccactccctcaccctcacccgcctcggccgccccgcgtcgccgcccctcctcgcgcacatcgaccgcctcgtgctcgccaccatgcgccagtgggagcccgccgccaccgtccgcctcatggacgaggccaagaagatcaccttcaacctcaccgtcaagcagctcgtcagcatcgagccgggaccgtggaccgagagcctccgccgcgagtacgtcaagctcatcgacggcttcttctccatcccctttcctctcgcctacttcctcccttttaccacctacggccaggccctcaaggcgaggaagaaggtggccggtgcactgcgggaggtgataaagaagaggatggaggagaaagcggagaatggtggctccattggggatgatgaggggaagaaggagaagaaggacatggtggaggagcttcttcaggcggagggtggcagcttctcggaggaagagatggtggatttctgcctttctctgctggtggctgggtatgagactacgtccgtgctcatgacgctcgcggtcaagttcctcactgagacgcctgctgcgctagctgagctcaaggaagagcatgccaatatcagggatatgaaagggaaaaaccaaccattagagtggagcgattacaagtccatgccatttactcaatgtgtgataaatgagacactccgtgtgggtaacattattagtggagtattcaggcgagcaaacactgatattcattataaagattacacaattccaaagggatgcaagatttttgcttcattccgagctgtgcaccttaataatgaacactacgagaatgctcggacatttaacccttggagatggcagatcaacaataaacttcagaatgcggtaggggccaatatatttactccatttggtggtggacctcggttgtgtcctggctatgagcttgcccgggttgtcgtttctatcttcctccatcatcttgtaacgcgctttagctgggaagaaaccgaagaagatagacttgtcttcttccccaccacacgaactctcaaaggataccctatcaatcttcggctgctttcagaatcaatttgctga</cdnaseq>

Protein Sequence

<aaseq>MAAAALLLLAAAAAAVVVAMALRWLLLLGGPAAGRLGKRARMPP GSTGLPLIGETLRLISAYKTPNPEPFIDERVARHGGVFTTHVFGERTVFSADPAFNRL LLAAEGRAVHSSYPSSIATLLGARSLLLTRGAAHKRLHSLTLTRLGRPASPPLLAHID RLVLATMRQWEPAATVRLMDEAKKITFNLTVKQLVSIEPGPWTESLRREYVKLIDGFF SIPFPLAYFLPFTTYGQALKARKKVAGALREVIKKRMEEKAENGGSIGDDEGKKEKKD MVEELLQAEGGSFSEEEMVDFCLSLLVAGYETTSVLMTLAVKFLTETPAALAELKEEH ANIRDMKGKNQPLEWSDYKSMPFTQCVINETLRVGNIISGVFRRANTDIHYKDYTIPK GCKIFASFRAVHLNNEHYENARTFNPWRWQINNKLQNAVGANIFTPFGGGPRLCPGYE LARVVVSIFLHHLVTRFSWEETEEDRLVFFPTTRTLKGYPINLRLLSESIC</aaseq>

Gene Sequence

<dnaseqindica>2806..2908#2527..2663#2306..2412#2109..2187#1857..1943#934..1212#85..798#agcagatcctctggttgtcggagcctcatcaatctcactcattctcactcgctccttgcccacgacgcgcacggccacgccgccatggccgcggccgcgctgctcctcctcgccgcggccgccgccgccgtcgtggttgccatggcgctcagatggctcctcctcctcgggggccccgccgccgggaggctggggaagagggcgcggatgccgccggggagcacgggcctgcctctgattggcgagacgctgcggctcatctcggcgtacaagacgcccaacccggagccgttcatcgacgagcgcgtggcgcgccacggcggcgtgttcaccacccacgtcttcggcgagcgcaccgtgttctccgccgacccggccttcaaccgcctcctcctcgccgccgagggccgcgccgtccactccagctacccgtcctccatcgccacgctcctcggcgcgcgctccctgctcctcacccgcggcgccgcgcacaagcggctccactccctcaccctcacccgcctcggccgccccgcgtcgccgcccctcctcgcgcacatcgaccgcctcgtgctcgccaccatgcgccagtgggagcccgccgccaccgtccgcctcatggacgaggccaagaagatcaccttcaacctcaccgtcaagcagctcgtcagcatcgagccgggaccgtggaccgagagcctccgccgcgagtacgtcaagctcatcgacggcttcttctccatcccctttcctctcgcctacttcctcccttttaccacctacggccaggccctcaaggtgctcgtccttttgcctccattcatttttttttctttccctatgcatcttgcctaacaacaaattggcgtaagctattgatgtactcctatatctctcataaaaatgtggcattgcacgatttgattcctgcaggcgaggaagaaggtggccggtgcactgcgggaggtgataaagaagaggatggaggagaaagcggagaatggtggctccattggggatgatgaggggaagaaggagaagaaggacatggtggaggagcttcttcaggcggagggtggcagcttctcggaggaagagatggtggatttctgcctttctctgctggtggctgggtatgagactacgtccgtgctcatgacgctcgcggtcaagttcctcactgagacgcctgctgcgctagctgagctcaaggtataaaactattcaaattagttgtttggtaattgtcaattcttgtatacacgtgcggtagtaggtaccaggtgctgtcaattgtcaaataacggctgaaataggaaggaatttcatttattatagttgggtgttaattgttaaaaatatggttgttagactatctttcacaccaattctgtccaaaagagaagtttctactttctatttccggtctgttgtttttagtcaagttcaactacagctttgttcctggtttgttattgacttgaatacttgatcctgagtattaatttattattgactcgaatcatttatgttcttgagtcctgacttcttttagtttaactgtgtaagaatgaatcttcacttcagtcagtactctggtttccttttttttttttctcattttatttacttgcattgatgagtgctaggttcctcagtctaacaacaaagtgagagaatcgtagcaataatatcacaataggtccaaatcttagaaatctgaactttatgacttttcctggtacaagttttgtttccaatatgttaagctttgagagtcctcaagattggtccaagtggtattttttacttcactacatgtgtaactgattccagatatcttgctgattttacaggaagagcatgccaatatcagggatatgaaagggaaaaaccaaccattagagtggagcgattacaagtccatgccatttactcaatgtgtaagttggaaagcccttgttttcttaaaaattagctactcctaaaaatatcatgccaacagcacgaatccatctagtgtaaatggcatctcttaactgaacctttgagacagtacagttggtttactcacatcatgattaaatgaagggttaacatttcttcaggtgataaatgagacactccgtgtgggtaacattattagtggagtattcaggcgagcaaacactgatattcattataaaggtatttcaatataaactatactaagcccacgtacattttattcattatctaaaagaagtccccatacatttttcatcagaaatgctcattatgtatggcatttttctttgtttcttagattacacaattccaaagggatgcaagatttttgcttcattccgagctgtgcaccttaataatgaacactacgagaatgctcggacatttaacccttggagatggcaggtactcctaggggctctgtgttattgctattgggtctacttattcaattatgtcctgtgctacaaaagtaaaatgcacgctgaagatatctgcaacaaatttgttcctgtgcagatcaacaataaacttcagaatgcggtaggggccaatatatttactccatttggtggtggacctcggttgtgtcctggctatgagcttgcccgggttgtcgtttctatcttcctccatcatcttgtaacgcgctttaggtgagccaccttaatctctctaattcaatcgctatcttgctagccagaaaggtgtagataatctgcaaatgaattttccacaattgtgatccaaattggacaccagtctgattccataacaacttgaccaatcaatttgcagctgggaagaaaccgaagaagatagacttgtcttcttccccaccacacgaactctcaaaggataccctatcaatcttcggctgctttcagaatcaatttgctgacgttagattgttttgcagctgctcttatcttggaagaaagactaaacatagataaatttatagaaaaatagttctcgcataggtagtgcatttccctcttttttgttgatctgtaacctggtatgtaaacagtaggcagcagagttgtgctgcttgtaaaatgacctaaaatgctgtggataccggttacaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0139300, RefSeq:Os12g0139300