Os12g0145400

From RiceWiki
Revision as of 10:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0145400| Description = Protein of unknown function DUF231, plant domain containing protein| Version = NM_001072677.1 GI:115487315 GeneID:435...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0145400

Description

Protein of unknown function DUF231, plant domain containing protein

Version

NM_001072677.1 GI:115487315 GeneID:4351490

Length

3314 bp

Definition

Oryza sativa Japonica Group Os12g0145400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:2230491..2233804

Sequence Coding Region

2230494..2230870,2232179..2232574,2232676..2232834,2233127..2233505

Expression

GEO Profiles:Os12g0145400

Genome Context

<gbrowseImage1> name=NC_008405:2230491..2233804 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:2230491..2233804 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggaggccgctggagaaggccggggcggcggggctggtcgcgatgctggccgccgccgccgcgctgctcctgctcgtgtgcgccgcctcgctccgctgctcggccgccgtcggctcggcgctggcggcgcccaagaagctcctcagcggcggggtctccatcgaggagccccgcggcggcggcgccggcggaggcggcggaggcgaggagtgcgacctgttcgacggggagtgggtgtgggacgacggctacccgctctacgcctccagggattgccccttcctcgacgtcggcttccgctgctccgagaacggccgccccgacgactcctacaccaagtggcgatggcgcccctcccgctgcgatctccccagatttaatgccagaaatatgctagagaaactcagaaacagaagagttgtatttgttggggattcgattgcaagaaaccaatgggagtctctgctttgtatgctcgctgctgctgttcctgacaagagctccatctttgaagttaatgggaatcctattacaaaacacatgggtttcttaattttcaagtttagagagtacaattgcactgtggagtattacaggtctcctttcatagtccttcaaggtcgtgcaccagctggagcccctgcagtcgtaaaatatacaattagagtagatgccatggattggatgtctggccggggtaagtggaaggatgctgatcttttgatctttaacacggggcactggtggaaccatgagaaaacaatcaaaggtggcgcctatttccaagaaggcaacgaggtcaaaatggagatgactgttagagatgcttaccaaagatccatgcagacattgtttcattggcttcgcaatgaagttaacacaaacaagacccagatcatcttccgtacatatgctcctgtgcatttcagaggtggtgactggaagactggagggacctgccacttggaaactctaccagatgtaactccaattaaatcgctggaaccgtgggctgacctgcttgaacccataaatcatgtactggggaacagcatcacgaccaagcttgtcgggctggatatactgaatgtgactcagatgacagctctgcgtaaagacgggcacctctcggtgtacctgagtccttcagggcctgcatctcatcacaggcaggattgcagccactggtgcctgcctggtgtccctgatgcatggaatgaactcctctatgccttgttcttgagaagaaagatggtgatgccccacaatgtttcaagtgtgggagctaaaagactcaacactgggtga</cdnaseq>

Protein Sequence

<aaseq>MRRPLEKAGAAGLVAMLAAAAALLLLVCAASLRCSAAVGSALAA PKKLLSGGVSIEEPRGGGAGGGGGGEECDLFDGEWVWDDGYPLYASRDCPFLDVGFRC SENGRPDDSYTKWRWRPSRCDLPRFNARNMLEKLRNRRVVFVGDSIARNQWESLLCML AAAVPDKSSIFEVNGNPITKHMGFLIFKFREYNCTVEYYRSPFIVLQGRAPAGAPAVV KYTIRVDAMDWMSGRGKWKDADLLIFNTGHWWNHEKTIKGGAYFQEGNEVKMEMTVRD AYQRSMQTLFHWLRNEVNTNKTQIIFRTYAPVHFRGGDWKTGGTCHLETLPDVTPIKS LEPWADLLEPINHVLGNSITTKLVGLDILNVTQMTALRKDGHLSVYLSPSGPASHHRQ DCSHWCLPGVPDAWNELLYALFLRRKMVMPHNVSSVGAKRLNTG</aaseq>

Gene Sequence

<dnaseqindica>4..380#1689..2084#2186..2344#2637..3015#gtgatgaggaggccgctggagaaggccggggcggcggggctggtcgcgatgctggccgccgccgccgcgctgctcctgctcgtgtgcgccgcctcgctccgctgctcggccgccgtcggctcggcgctggcggcgcccaagaagctcctcagcggcggggtctccatcgaggagccccgcggcggcggcgccggcggaggcggcggaggcgaggagtgcgacctgttcgacggggagtgggtgtgggacgacggctacccgctctacgcctccagggattgccccttcctcgacgtcggcttccgctgctccgagaacggccgccccgacgactcctacaccaagtggcgatggcgcccctcccgctgcgatctccccaggttgggtttgcttcctcctcttccatcgatttctacttcttcctctcatctttggtactcttgcatattatgcttccattgattccattgttggattggggtggcgagtttggaggtttagatagaaatcgattttagtaaatgtttacttcgagagcttgacgaagatcaatgaagaaatctttaatgagatctcttgctgcaatccaagcatctagaacggtgcggagatggcgaatgattaattgattagtataaattaattaaggagatgtggattggagaccgtgctacttaattttgtctgctggaatgttctacaacttgagtgttaacttataaaggcaaagaaattaagacggacttaaataaacttgggttgaatctagaacccaaacatgctgctctgctggcatgatgaggattaagtttgggttagtgcttctgacttcaatcttccagtgggatattcttgctgagattggatcagtgggcgtgcattttacaatcttcaccctggttaaaattagattattggaacatgggatgatcatgatgctgtcaacgaccaactccactttggaactgtgcgccacgattggaaattcgatgcccttttgcttcccacatgattacaaaagtaggaaacaatgttacccgtatggttattgcttagtcctgcagaagatatattttattaaatcagtattgtttacttgatctgcgactgtcatgctgttgcaatcatctttaccttcgatggagaggtggtcttgtcctgttaattgttgagggctctgttttgttgtgttctaactgcctttgttgcagttaagtggttgcttgattcaatttggaaaagtaaagtggttccaagattagatttctaccttttgaaaagaatatttaatcttgattcttgtcaccataaatgtcagtagctatacttggagggtaagtttgtcatccttcataagtgctaattgtatgaaattttgcaaaggtggaatattataacattagggatgtgttacatagtaccatgtaaaaggactcgcatttttttgttagaagcataatctcgttgtacttatgttttttaatgtattgcatgccttttgatttctcagtgaattattttataaggaaagagcatgcttgtgaccttgtaagttcattattttgtgaccttgtatggtactcccttgatacctgtggactgagatgtaccattatcaataaattcaaatgcccatattagcaatgctggtgtctcactctaatttcgtctccttttctgtttcttagatttaatgccagaaatatgctagagaaactcagaaacagaagagttgtatttgttggggattcgattgcaagaaaccaatgggagtctctgctttgtatgctcgctgctgctgttcctgacaagagctccatctttgaagttaatgggaatcctattacaaaacacatgggtttcttaattttcaagtttagagagtacaattgcactgtggagtattacaggtctcctttcatagtccttcaaggtcgtgcaccagctggagcccctgcagtcgtaaaatatacaattagagtagatgccatggattggatgtctggccggggtaagtggaaggatgctgatcttttgatctttaacacggggcactggtggaaccatgagaaaacaatcaaagggtaagcataaatgtttgaattctattgactgaacagcattctctacttaatgtcttatggctgagagatcatgctattcttactgttatgtcttgcaccagtggcgcctatttccaagaaggcaacgaggtcaaaatggagatgactgttagagatgcttaccaaagatccatgcagacattgtttcattggcttcgcaatgaagttaacacaaacaagacccagatcatcttccgtacatatgctcctgtgcatttcaggtctgtgaatcaccaactctaattactcaaatagtgagtgtttcccttggttttaattccttgctcaaacattatttgacagtcttgattgattgtgtatgttgtatcgaatgatatcagatgcttttgaccatacattgtttcattgttttatgtgaattgtgccaatatattgttagcatcatgaaacaatgctgatggtatttattgttggacttgtgaacaaacatcatagtatctttcaaatattcagtcaaactatttctttaactagattagatatttcttacagaggtggtgactggaagactggagggacctgccacttggaaactctaccagatgtaactccaattaaatcgctggaaccgtgggctgacctgcttgaacccataaatcatgtactggggaacagcatcacgaccaagcttgtcgggctggatatactgaatgtgactcagatgacagctctgcgtaaagacgggcacctctcggtgtacctgagtccttcagggcctgcatctcatcacaggcaggattgcagccactggtgcctgcctggtgtccctgatgcatggaatgaactcctctatgccttgttcttgagaagaaagatggtgatgccccacaatgtttcaagtgtgggagctaaaagactcaacactgggtgataaaagccaaaggagtactgctggatggccatgtcctctcttactgaagcaaagctttcataactcataagctaggtagctgagctggggaggacacatttttggtagtacattagtacagtttggttggcaagaagttaagctgcaccactgtgctgtgattttcaattgcggaggttagcgaaaagagctgggcaaaggtaacagtagctctttttttttttccgatagtgaaaatcattgcaacctctacatccaagtgtatatccggtcatggtaacaatagcttagcctgtatt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0145400, RefSeq:Os12g0145400