Os12g0147000

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Revision as of 10:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0147000| Description = Protein of unknown function DUF296 domain containing protein| Version = NM_001072684.1 GI:115487329 GeneID:4351497| ...")
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Gene Name

Os12g0147000

Description

Protein of unknown function DUF296 domain containing protein

Version

NM_001072684.1 GI:115487329 GeneID:4351497

Length

4185 bp

Definition

Oryza sativa Japonica Group Os12g0147000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:2304526..2308710

Sequence Coding Region

2304526..2304934,2305414..2305481,2305585..2305716,2307813..2307971,2308170..2308523
,2308669..2308710

Expression

GEO Profiles:Os12g0147000

Genome Context

<gbrowseImage1> name=NC_008405:2304526..2308710 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:2304526..2308710 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagggatcaagatcaagggagtgcattgctgtggcaagtggccatgaagcagcagcagcgccagcaggctacggcctgttcatcagaacagcagattgttccatggctgaagcagctgcacaacaagaagccgcagcagcagcgaaagggtaccggtcttctccctcctcgccgtcgtcgatgtcccccactccgtcacctccaccggcggcagctgtccatggaggaggaggagcggaggatgccgccgccgccgccattgcaacgccagccgcgcggagtttgggtgcaggggacagcggcagcatgcaggtgagtggccatggcgagcatgctgggttgagctccagacggcgtcgtggccggccgaaagggtccgggcggcgccagatccttgccaatctaggggaatggtatgcgttatcagctggagggagcttcacgcctcatgtcatcattgtcgccacaggggaggatgtggcggctcgcataatgtccttctcgcagaagggtcctcgctcggtttgcattctcgctgccaatggcaccatctcaaatgttgtattgaaccagcctggctcgtctggtagcaccttctcctacgagggctgctttgagattcttcaactgactggctcctttacaattgcggaggaaggcgttcggaggagaaccggcgggctcagtgtctcgcttgccggccctgatggccgtgttgtcggcggtgtagtagctgggatgctgcgagccgccagccctattcaggtgattgtggggagcttcttgcccaacaacctgaagcagcatcagagaagaatgggcctacatccacaaccatctgctgctccggcatttccagcaccgatggctcctcttcatcctcctcctgtgctcacagctgcgatgcccatttctcaggcagctcctggcaacaatggctgccgttcgccgcaggtttcgatctcatccatgcctccacaagcacatgccggtgtggagcagagtagaggcgccatgaacctgaattcatcgagctccagtactggtttcgccatggttgggtggcctgcagctgcaagctcgcagtccatggtgcacaggccttcacctgacatcaattttggttgggggatgaaacaggccaacataagaacagtttag</cdnaseq>

Protein Sequence

<aaseq>MEGSRSRECIAVASGHEAAAAPAGYGLFIRTADCSMAEAAAQQE AAAAAKGYRSSPSSPSSMSPTPSPPPAAAVHGGGGAEDAAAAAIATPAARSLGAGDSG SMQVSGHGEHAGLSSRRRRGRPKGSGRRQILANLGEWYALSAGGSFTPHVIIVATGED VAARIMSFSQKGPRSVCILAANGTISNVVLNQPGSSGSTFSYEGCFEILQLTGSFTIA EEGVRRRTGGLSVSLAGPDGRVVGGVVAGMLRAASPIQVIVGSFLPNNLKQHQRRMGL HPQPSAAPAFPAPMAPLHPPPVLTAAMPISQAAPGNNGCRSPQVSISSMPPQAHAGVE QSRGAMNLNSSSSSTGFAMVGWPAAASSQSMVHRPSPDINFGWGMKQANIRTV</aaseq>

Gene Sequence

<dnaseqindica>1..409#889..956#1060..1191#3288..3446#3645..3998#4144..4185#atggagggatcaagatcaagggagtgcattgctgtggcaagtggccatgaagcagcagcagcgccagcaggctacggcctgttcatcagaacagcagattgttccatggctgaagcagctgcacaacaagaagccgcagcagcagcgaaagggtaccggtcttctccctcctcgccgtcgtcgatgtcccccactccgtcacctccaccggcggcagctgtccatggaggaggaggagcggaggatgccgccgccgccgccattgcaacgccagccgcgcggagtttgggtgcaggggacagcggcagcatgcaggtgagtggccatggcgagcatgctgggttgagctccagacggcgtcgtggccggccgaaagggtccgggcggcgccagatccttgccaatctaggtcagtatatattgcttcttcagaaatgcagagttcattacatgattttctttggatttggaaaatacccagtttccattttttttcatgtttatgttcttgttattggtgtctcttcttcattttttttgggggtgaatttctgtttcattgcttgcatggggtccagtggagaggatgatgtgtaatgttgccttttgagctgaagagggctctactgcttaccagtcaataaccgttaggaataagcacatttctgctgttcatgctcttgtgtttgtccggattcatctcagtccaaacctttggatatgtatgaattatttggtgattttcctaggtggtttaactaatcgacccaatcctttgggcgatttcgttggttttcatgaggataaacttcagttaaggagtagtctggtagtagacaacaaagtgcacatcgctttgtctgattggtattctcaatgcttgtaaaggggaatggtatgcgttatcagctggagggagcttcacgcctcatgtcatcattgtcgccacaggggaggtaagccataactgaagttttttttttaacagttagcttggcattgtgatttgattatgaaaggatgaacactgactgtttctttggtgcaattcgttggtaggatgtggcggctcgcataatgtccttctcgcagaagggtcctcgctcggtttgcattctcgctgccaatggcaccatctcaaatgttgtattgaaccagcctggctcgtctggtagcaccttctcctacgaggtatgaaatggagttcactccttgcatcgtgtgatagtatgatacttggaaatgttgtgagctaatttgacggctgcctgaacttctgatggagttatgggtatgtctcaagtcggtctattcagtttttttggcctgtctctacctaatctcttagtttcagtatcaccacctttatagtactagatacaataaatggtcttcttgcctaagttgagaaagtattttttctgtaatggtgtcttaagtcttaaccaccttatgcgagccacttttgaagacagatcaagggtgaagtcttcttcccaatttttctatgttcatgatagcacatatacaattccggcagtctgtagtaacatactccctctgtcccataaaaaaaaaagagtaaagtccaccaccggtccctaaacttgtactgctgtgtcatcccggtctctaaactcgcaaattgactgttcaagtcctcaaacttgttcgactgtgtcatcccggtccctaaacttgcatatcacttgtttaggtcctccaacttgttcagttgtgtcaacccggtcccaaaacttggatttgaatatcatttgggtcaaataggacggtctaaagactttatatttaaaaataattcataacttttcatgtgaactctaatgaagacaaactttatatcaaacttgtagccctcgacgcgatctacaactttgtagttgaattattttattttaagtcattttttgtcccaaaatgtaattttaaaattaaaatttcaaaatctataaacatgcaacaatattttgggaccctaaacagttttaattcaaaaacttttcaactacaaagttgtaggtcacgtcgagggatacaattttgatataaagtttgtcttcattagagttcacatgaaaaagttataaattattttttgatataaagtttttagaccgtcctgtttagggaccggggtgacacaactgaacaagttggaggacctaaacgagtgatctgcaagtttagggaccgggatgacacagtcgaacaagtttgaggacctgaacggttgatttgtgagtttagggaccgggatgacacagcggtacaagtttagggatcgatgatggactttactcaaaaaaaatctagaactgtatgtaacatattaatgtgtcacatctggtattatggtgggttttataggacggagggagtatacgctcaagtctgcaaattgtacgcgagtctcaataacgttgtccagaaaacagtcagtgatgcccggccaaaaaaaacagtggtatattactagattagcatgtgatttgtgctaatgtctcccactcccatccccgtttggtagggctccaaactctaactcaagtgagagctagctcctattagagttgaagactcgttgaaaagtgtttggctacgtttcagctctagatatgaaaaaaaaagaaaaaaaattgaaaaaatcgctggccgcgtaccaccagcctaccagccgctcgccgttcccaggcgcttcgtccgccggccggtgttgtcgccaggcgtgccgcgcgccgccggccacacgttgtccccaggcgcgccacccgcccgtggtctccgcgccggcctatcgccccctcccccgctcccgctcccgcagctcggttggcatcgtgaggaagatggggggaggagagagaacgggatgagaggagtgaagggtagttgaatggcattttttataaatagactaaaaaattaaagggtagtaggtattttaggatggagtggagctgtggagcagaaaaacccagctccacccccatagttcattttctaggagtagatctgctagctccactccaaaaaatggaggatctggaccgtttggcacagccccggctccaggtaagttggagttgggagctagagctgtgccaaacagggccctgcctaagagacagagcggctgtatgcctatatcagtgtaggataacaattgaagcgaagttgttacttatcgtacgtgcatacacatttgtgtttacagttatcctcactgaactctaagatggcagcatttatggatatgtggttgccagggctgctttgagattcttcaactgactggctcctttacaattgcggaggaaggcgttcggaggagaaccggcgggctcagtgtctcgcttgccggccctgatggccgtgttgtcggcggtgtagtagctgggatgctgcgagccgccagccctattcaggtaaagaaacaacaacaacaactgaagaacctggacaaaattaatcgatttttcgataacgtaattcagtcgaaccaagtaccatgcttttacaactgaagatagagaacttcgttgttaactctgtcactcatgcatggtagactctgtagccattttttttctctgaagctctaaacacaatatctccatggacaggtgattgtggggagcttcttgcccaacaacctgaagcagcatcagagaagaatgggcctacatccacaaccatctgctgctccggcatttccagcaccgatggctcctcttcatcctcctcctgtgctcacagctgcgatgcccatttctcaggcagctcctggcaacaatggctgccgttcgccgcaggtttcgatctcatccatgcctccacaagcacatgccggtgtggagcagagtagaggcgccatgaacctgaattcatcgagctccagtactggtttcgccatggttgggtggcctgcagctgcaagctcgcagtccatggtgcacaggccttcacctgacatcaatgtctgcttgactcctcaagagtaggatcaatttgtcctatttttttgttgccctcgtgcctgacatgcgttgttgtggcatggctgtcacgtgacatgtgtttgggttcaattctatctaatcacgtgtcttgagtagtttgcagtttggttgggggatgaaacaggccaacataagaacagtttag</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0147000, RefSeq:Os12g0147000