Os12g0149000

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Revision as of 10:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0149000| Description = Conserved hypothetical protein| Version = NM_001072691.1 GI:115487343 GeneID:4351505| Length = 1383 bp| Definition ...")
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Gene Name

Os12g0149000

Description

Conserved hypothetical protein

Version

NM_001072691.1 GI:115487343 GeneID:4351505

Length

1383 bp

Definition

Oryza sativa Japonica Group Os12g0149000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:2417005..2418387

Sequence Coding Region

2417147..2418226

Expression

GEO Profiles:Os12g0149000

Genome Context

<gbrowseImage1> name=NC_008405:2417005..2418387 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:2417005..2418387 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgagcgcgtcaagcctcctgctcccgtcgtccgtgcgcgacttcgcctcctgcatcggcgacggcgccgcctgcaccgcgccgtcctccacccgcacccggaggggctccgccgccgtgcaggcgcagccgtccacgctctccgtcaccgcctcgtaccgcgtcgcgctcgcgtcgtcgtcgtcgccgccgctgcagctccggctcacctgggcgcactccccgctcggccccaccctgtcgttctccccctcggcgtccggtcgcaaggtgctcgtccgccgccggaggggttcttgctccgtgctgtcctccggggaggatgaggcggtggagtcggagtcggagttgtcggcgtcgtcgccgcggctcgcgctgttctgggacctgaccgcggcgcggttcgaccccggcggcgtcgccggagccggtgtccgggtactacgtggtggtggccgtggaaagcgcggaggtggtgctcgcgttgggcgacctggcggcggagttcgtcaaggccaagttcgaggggacgacacagatccccatggcggcgccgttcgcgcgcggggagcgcgtggtggtggcggtgtcgtcggacgcggcggcggcggtgacgcacaccgcgcgcgcccggttcgcggagggcggggcggagcacgaggtgagcgtggggtgcgcgcctggcggcggcggcggcggcggcggggacgagctgtgggtgagcatcgacgggaagcgcgcggtgcaggcgcggcggctccggtggaacttcagggggaaccagacggtgttcgtcgacggccagcccgtggacgtgatgtgggacctccacgggtggtggttccggcgagagccgccggcgccgggctgggcggtggtgatgctccgggcgaggagcgcgctcgagagccgcctatggctggaggaggaggccgccgcgccggccttctccctcctcgtcgaggccttcaagtccccaccttgacttcaccatcttcttcttcttcaacagcttcttcattgcctcatttgatgatggaatttaccaaaccatcaaaccaaatatgtgtcctttga</cdnaseq>

Protein Sequence

<aaseq>MVSASSLLLPSSVRDFASCIGDGAACTAPSSTRTRRGSAAVQAQ PSTLSVTASYRVALASSSSPPLQLRLTWAHSPLGPTLSFSPSASGRKVLVRRRRGSCS VLSSGEDEAVESESELSASSPRLALFWDLTAARFDPGGVAGAGVRVLRGGGRGKRGGG ARVGRPGGGVRQGQVRGDDTDPHGGAVRARGARGGGGVVGRGGGGDAHRARPVRGGRG GARGERGVRAWRRRRRRRGRAVGEHRREARGAGAAAPVELQGEPDGVRRRPARGRDVG PPRVVVPARAAGAGLGGGDAPGEERAREPPMAGGGGRRAGLLPPRRGLQVPTLTSPSS SSSTASSLPHLMMEFTKPSNQICVL</aaseq>

Gene Sequence

<dnaseqindica>143..1222#ctctcctctccccgcgccggcagttactggttaaaactcgtcgcctccgccataataagttcactcctcctcctcctcctctcttagctccactccacctcgccgcagatctcccgcgacgagctcgagctagctcgaggccatggtgagcgcgtcaagcctcctgctcccgtcgtccgtgcgcgacttcgcctcctgcatcggcgacggcgccgcctgcaccgcgccgtcctccacccgcacccggaggggctccgccgccgtgcaggcgcagccgtccacgctctccgtcaccgcctcgtaccgcgtcgcgctcgcgtcgtcgtcgtcgccgccgctgcagctccggctcacctgggcgcactccccgctcggccccaccctgtcgttctccccctcggcgtccggtcgcaaggtgctcgtccgccgccggaggggttcttgctccgtgctgtcctccggggaggatgaggcggtggagtcggagtcggagttgtcggcgtcgtcgccgcggctcgcgctgttctgggacctgaccgcggcgcggttcgaccccggcggcgtcgccggagccggtgtccgggtactacgtggtggtggccgtggaaagcgcggaggtggtgctcgcgttgggcgacctggcggcggagttcgtcaaggccaagttcgaggggacgacacagatccccatggcggcgccgttcgcgcgcggggagcgcgtggtggtggcggtgtcgtcggacgcggcggcggcggtgacgcacaccgcgcgcgcccggttcgcggagggcggggcggagcacgaggtgagcgtggggtgcgcgcctggcggcggcggcggcggcggcggggacgagctgtgggtgagcatcgacgggaagcgcgcggtgcaggcgcggcggctccggtggaacttcagggggaaccagacggtgttcgtcgacggccagcccgtggacgtgatgtgggacctccacgggtggtggttccggcgagagccgccggcgccgggctgggcggtggtgatgctccgggcgaggagcgcgctcgagagccgcctatggctggaggaggaggccgccgcgccggccttctccctcctcgtcgaggccttcaagtccccaccttgacttcaccatcttcttcttcttcaacagcttcttcattgcctcatttgatgatggaatttaccaaaccatcaaaccaaatatgtgtcctttgattacaacttccaacttagattagattttcttttatgggagataagattatcatcatgtctggggaaaaacaacatcatggacaggtcatatactgagagattggtgtgattgtgtagtgtaggatcgttttttattattattattattgcttttcctcttt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0149000, RefSeq:Os12g0149000