Os12g0152700

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Revision as of 10:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0152700| Description = Amino acid-binding ACT domain containing protein| Version = NM_001072709.1 GI:115487379 GeneID:4351525| Length = 449...")
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Gene Name

Os12g0152700

Description

Amino acid-binding ACT domain containing protein

Version

NM_001072709.1 GI:115487379 GeneID:4351525

Length

4494 bp

Definition

Oryza sativa Japonica Group Os12g0152700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:2594613..2599106

Sequence Coding Region

2594923..2594985,2595079..2595147,2595233..2595338,2596099..2596154,2596356..2596415
,2596544..2596622,2596870..2596964,2597085..2597198,2597642..2597693
,2598870..2599015

Expression

GEO Profiles:Os12g0152700

Genome Context

<gbrowseImage1> name=NC_008405:2594613..2599106 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:2594613..2599106 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctctcgccgccgccgccgccgcccaccacctcgtcgcgcccgccgccgtgtcgccgtactactcggctcgcgtgtcgccggggttcctccgcctccacgacttcccccgatccgtcggcctggccgccaccgcggccccgaggattttttgccaatctatcaactcggctgatgtcttgggtgcttcttcaacgacatctgatgatgcaattccacagccagttgttctgatagatcaagactcagaccgtgatgcaaccatagtgcagctgagttttggagaccgtctgggggcactacttgacacgatgaaggcactcaaggacctgggccttgatgtgacgaaaggaagtgtgtcaactgaatcagctgtcacacaaacaaagttccacatcatgcgatcggggcgcaaagttgaggaccctgacacattggaaaagatacggctaacagttattaacaaccttctgcagtatcatcctgaatcaagtgagaatttagccatgggtgaattttttggaataaaagctcctgagaagaaggttgatgttgatgttgtaacacatgtaattgttgaagatgatggacctaaaagaagcatgctgtacatagagacagctgatcggcctggtctacttctggaaatagtgaagatcatcactgacgtgaacgttgatgtggaatcagctgagatagatactgaaggcttggttgcaaaggacaaattccatgtgagttacagaggtgcaaaattgaacagctcattatctcaggtgctcgtgaattgcttgcgttattatctccggaggcccgagacagatgaagacagctactga</cdnaseq>

Protein Sequence

<aaseq>MALAAAAAAHHLVAPAAVSPYYSARVSPGFLRLHDFPRSVGLAA TAAPRIFCQSINSADVLGASSTTSDDAIPQPVVLIDQDSDRDATIVQLSFGDRLGALL DTMKALKDLGLDVTKGSVSTESAVTQTKFHIMRSGRKVEDPDTLEKIRLTVINNLLQY HPESSENLAMGEFFGIKAPEKKVDVDVVTHVIVEDDGPKRSMLYIETADRPGLLLEIV KIITDVNVDVESAEIDTEGLVAKDKFHVSYRGAKLNSSLSQVLVNCLRYYLRRPETDE DSY</aaseq>

Gene Sequence

<dnaseqindica>4122..4184#3960..4028#3769..3874#2953..3008#2692..2751#2485..2563#2143..2237#1909..2022#1414..1465#92..237#aagcgacagaaaagacacacacagagagaaaccgcctcacctcacctcgcctcgccgcagtgcgcgcagcgagtgtcaccaccaaccagccatggctctcgccgccgccgccgccgcccaccacctcgtcgcgcccgccgccgtgtcgccgtactactcggctcgcgtgtcgccggggttcctccgcctccacgacttcccccgatccgtcggcctggccgccaccgcggccccgaggtgagcgatctaggcatctccgcgttgcgtctggctgtttgattcgaatcgatgacgagggaggggtggttcgccgtgtcgggagatgtgcggtaggattggactattggagtgtcgtgtcggtagactgaattagttgatattgttttggattggcttggagaaatcgcggttgtactaatagtatcttgatagattccttacctagtacagatattgtcctgcggttgtttgtacacggattacactatttacgttttttttttgcctaaaacgttgtaattgtcagctggcaagaacgattatcctaaattctagtatcttgagatgcaatcgttttattattatctcacttgtatatcttgcgttacttaggtgcagtttcacccggtgtggaaatatccatgttagtctcagtttcactaaggtagtgaggttcatgtttaggtgaacatgaatgttggagaaggtctctatcagttgattggagtactaataggagttggaaaatgaatggaatgaacaagaaaaaaaaattactttcatgcttcaaatccttagttcactcgaaagaaactttacatagagagctcgtgccacggtgtgcggatttgtttcaaggccatattgacacaagttacaactctacctacactttgattctcatttctcacaagtcataaatgaataaacaacatgagaagaccgatttgctacacgatgggcttttcatttactaactcgtgaaggcctattgttacatgtgttggattctgtgggctttagcactggaattgtggcataaagctttctaaaactatattttctattcaacgtgtccgtctgtaaacactatatgatcgttttaaagaaatctgtgtgctttataattaggagccatctaaggattttctgttgaatgctggtgcatcagtaaagggacagaatcagtacttagttgcagtcaactgtgcaatccttattttccctttgttacttttgttcatgtatgtcagtccaatggctactgagtggctgagtgctaactttgaaatgcataacgtgattctatttctagtgttgctatttaattctgcggttatttgtagtacatcagtgtcctgaactaagctcattccctcctctaaatcatttttctcaatgccatcactgtaggattttttgccaatctatcaactcggctgatgtcttgggtgcttcttcaacggtatgtacatattgattttccattcatgtcaccatatggaaacacacatttcacagcgacacgtccttcagctttgttgttccacttaaaaaaaaatcaagtgatgaaggatagagttgtcttcctaaacagtggagatctggagtaacaacccagcctgcaaattaggtccacagtgcaattattcatctgaggacatgtgtgaagtcagttcagttgtagacatggtccgcgggaagagttgcttcacatttcaatatctgcatgagaacttatattgtttccatttagtccgattattattttttttgttttgacattactttttttttgcttcgtgtatgctatttttaattgcttactaccattaaaatattttagaacatatttagctaatgatatttttctaccatgtaccttttctccccccaaaaatattgcagacatctgatgatgcaattccacagccagttgttctgatagatcaagactcagaccgtgatgcaaccatagtgcagctgagttttggagaccgtctgggggcactacttgacacggtataattttcctatgctatgggtgctctatttgatctgatcttgtttaagatatatttcgtaattagtaatttttgttgtatcagtaaattattttgtcctggtattcactgtttgcagatgaaggcactcaaggacctgggccttgatgtgacgaaaggaagtgtgtcaactgaatcagctgtcacacaaacaaagttccacatcatgcgatcgtgggtgcacgccactttctgtgtgctgcattttgtcatgctgtttagtttatatttgaagtagagggtgtattttctcattgaatccacatatttatcaaagtaccatactaatagtttacatgtgcactaaacacaatacgagattaaaacatttagcaactatcatgcttcttatattgttttggtgatttggataatttcatgtctaatattatctttttccccctcttctgtctgtatctagggggcgcaaagttgaggaccctgacacattggaaaagatacggctaacagttattaacaaccttctgcagtatcatcctgtatgttccgagcgtcacatccttttacttgtgtttagaacttctaccgttagtaattttggatccgttcttgtttttatgaatcaaagtatcaaactaactcatttgtctggttgatatgcatgtaggaatcaagtgagaatttagccatgggtgaattttttggaataaaagctcctgagaagaaggtgagttcattggatgttctcattctgcttgttcaccacccatgctctgttatcaagcatcttctcaattttaaagttgtgtgttttcctcaattttaacacagtaaaaaagttaggttcctgagtgttttgttatgctgttaattttgtattccattaactttagcatgaacgtgatttatttgttctttaaactctcaggttgatgttgatgttgtaacacatgtaattgttgaagatgatggacctaaaagaaggtttgatccaactaagccataatgattatatacaattttagcgtgattccttatttcagtatgccttgcttaggagtgggatgtgacatgtccacagattgtataattgaacacttatggggcattacaagtgcacggctagatagttaccttaaaaataggcacacattttcttctagtttttgtttgttgtgtttaaccctggtccttaagggcttgtacgagtcttcctagactccctctcttcttaatagaatgatgcgcagctctcctatgtgttagaggaaaaaaaggcacacaaggactcttgattcatattatcgttactgatttctccacaaaacaaggacctgatagcatactttacgaatgcaaccggtagaagtaacttgagaaacacaactacatatacatgtatgttcatgcctatcctatcaatccaaagtccaccaagatttgtgcaaagacattgaatctattataagatgtttgaagttttgcattatataacactgtgaccccaaccctccctagttttatacaggtataatttttttcatggtaatttgagtctgtaaatcattgaatttctatgcacatcatttaatagttcatgcttgatacatgtctacatattattagtaatgcatgtattgtttctcaatatcacatctgatataacatgtgccttacttctctgtttgctccatatgatgttcatcatccgtcttcctcattgatattagttaaacatgtgcagcatgctgtacatagagacagctgatcggcctggtctacttctggaaatagtgaagatcatcactgacgtgaacgttgatgtggaatcagctgagatagatactgaagtatgccatgttcctatttctttgttatgaaatccccttgttctgtcaactcccttccttacttcatatgtgatgttttattcagggcttggttgcaaaggacaaattccatgtgagttacagaggtgcaaaattgaacagctcattatctcaggtattgcaatgccttgattactactttctgttaaaatctttggtcatctcagcaacatcatacttatatatctcttaacatgccatcatataggtgctcgtgaattgcttgcgttattatctccggaggcccgagacagatgaagacagctactgattcttatgaaaacccgggctttgagttcctttctgcaagcccattgtgctgatttttcggttgtagtgaacaaaaaacgtggtacatttgtcctcaaaatgcatccgtatattatgctttacgtaggatgcatttaaaatcgggccagatccgggagattcagctcaatatggcccgttatcatcaccattggttcctacagtagtagaggaatcacattgggactgggaggccatcacctgatggatgctgtctgtaatttcctataattcgcttgaacctgtcgaaatcacaaggatatgcatacatt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0152700, RefSeq:Os12g0152700