Os12g0156400

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Revision as of 10:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0156400| Description = Dcp1-like decapping family protein| Version = NM_001072730.1 GI:115487421 GeneID:4351547| Length = 3124 bp| Definit...")
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Gene Name

Os12g0156400

Description

Dcp1-like decapping family protein

Version

NM_001072730.1 GI:115487421 GeneID:4351547

Length

3124 bp

Definition

Oryza sativa Japonica Group Os12g0156400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:2779623..2782746

Sequence Coding Region

2779691..2779882,2780007..2780047,2780163..2780212,2780824..2780968,2781298..2781354
,2781448..2781571,2781798..2782259,2782341..2782394

Expression

GEO Profiles:Os12g0156400

Genome Context

<gbrowseImage1> name=NC_008405:2779623..2782746 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:2779623..2782746 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggccgccggcgccggcgacgacggcaggcgcgggggggaaggtgacgccgaacctggcgatggacgcggaggggacgcggctgctcaacctcaccgtgctgcagcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccacgtcacgctctacgacttcaacatcgagctcaaccagtggagccggaaggacgtcgagggatcgctgttcgtggtgaagaggaacaagcagccgaggttccagttcatcgtcatgaacaggcgtaacaccgataatctcgtggaggatctattgagtgactttgaatttgaacttcagcctccgtatttgttataccgaaatgctgcacaagaagtaaacggtatttggttttataaccaacaagactgtgatgctgttgcaggtgtttttggaaggatattgaatgcttacgccaaagtgcctccaaagcccaaagtaccttccacaaaaagtgagtttgaggaattggaagctgttcctacatccgctgctatagatggcccccttgaaccttcttcgtcgtccactgttctagtttctaatgcccctgatgaatcattgactgattatttcagtggcgctgttaatgttgggaatgtatcaattacaccaatggttggaagaactcatcagcctatcgagtctgttgcatcctcacacgtaccattgatcatcccatctgctgctcctacacatcaaatgggtgttccttcaggggctgcgtcagctccaccactgcccgtcattgacactaacgttcattctagccactcaacaaatcttgtaactccagccttttttgcacctccctcatcgtcttctgcatcattggtggcaccagcttcatcctttatgcccacagcatcaccttttcatccaacttctgccgatgctcaccgtccagcatatggacatggtacaccccttcttcaaccccttccgccgccaacaccacctgcatcacttacccctgtacacaacgatgagcctgttatttcgagggataaagttaaagatgctctcctgaggcttgttcagaacgacgaattcatcaatttgctctatcaggagttacagaatgcacatgcgtag</cdnaseq>

Protein Sequence

<aaseq>MRPPAPATTAGAGGKVTPNLAMDAEGTRLLNLTVLQRLDPAVED ILITAAHVTLYDFNIELNQWSRKDVEGSLFVVKRNKQPRFQFIVMNRRNTDNLVEDLL SDFEFELQPPYLLYRNAAQEVNGIWFYNQQDCDAVAGVFGRILNAYAKVPPKPKVPST KSEFEELEAVPTSAAIDGPLEPSSSSTVLVSNAPDESLTDYFSGAVNVGNVSITPMVG RTHQPIESVASSHVPLIIPSAAPTHQMGVPSGAASAPPLPVIDTNVHSSHSTNLVTPA FFAPPSSSSASLVAPASSFMPTASPFHPTSADAHRPAYGHGTPLLQPLPPPTPPASLT PVHNDEPVISRDKVKDALLRLVQNDEFINLLYQELQNAHA</aaseq>

Gene Sequence

<dnaseqindica>69..260#385..425#541..590#1202..1346#1676..1732#1826..1949#2176..2637#2719..2772#gctctgtgctcccttctcgggcctcggtttgctcagatccaccgcgtcgcgccgtcgatccgacgccgatgcggccgccggcgccggcgacgacggcaggcgcgggggggaaggtgacgccgaacctggcgatggacgcggaggggacgcggctgctcaacctcaccgtgctgcagcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccacgtcacgctctacgacttcaacatcgagctcaaccagtgggtgggtgaagccatgcgccgatctgctcgcctccctccgctggtgtccccgtccatatgatccgatctgacgccgtgtttttttttctctcttccttgtctcccttttgggtctatgtgtgcagagccggaaggacgtcgagggatcgctgttcgtggtgaagaggtgaggtgggggtgctttgggcttcgggaatggtggtttagggtttggatcggggtttttgcgtgtgtgctgattgagatctaacactttctggaacgcgttggatcgcgtgtaggaacaagcagccgaggttccagttcatcgtcatgaacaggcgtaacaccggtatgtagttgatgagtttttttttcctgttgcccgtatttcgtagcacgcttgttgtttagaactttggatattggactgattgagctgatctgtagtaccactatgacctgtgatctctgatctgtagttctgacacatatccagatattagcaggctagttcttcttaggattttaatttactataggcttttggaaagaataatctgaaattctgcacccaaatggcatatatacgtaaatcagctatgatcaaggtatatctacatctatgagtagcagagcattttatgattttgtagaaggtgtttttttttataaccacagtatttaacacagttacgcagatatcagctcaatacatcatagtctagacaatgaactgcaacattcaatattaattaatttgatttgtatgctttttaatgaatttgatttgtatgctggattcctcatgaaaagatctgtttctgttgttgtagcctgtaacagataatccaagatctgggctgtgtatatccccttgcagatatagaggccggatttctatccattttctaaaaaaacagataatctaagatctgtttttcttgtcgtaactcgtaacagataatctcgtggaggatctattgagtgactttgaatttgaacttcagcctccgtatttgttataccgaaatgctgcacaagaagtaaacggtatttggttttataaccaacaagactgtgatgctgttgcaggtgtttttggaaggtaaggccttttctctaatatctcacctgcgtgacatgtttcaatctgactgggtcatttagattgggcaaacaagaaatggacagggacagatgagaaccatctaagaatcgtgctccttgctatctccatttatgccatgaactaatttcgctagttactcttttgtgtaaaagacatttgtttttttacttttgttgtttagtatattcaccaaatcgtaaattagtagttgcaaatgtgatcctttttctgattctaaattatattatgtctaagtacatacactttgactgaaactgtggttgaattgatctgtttgggttcaggatattgaatgcttacgccaaagtgcctccaaagcccaaagtaccttccacaaaaaggttcccatcttttgagttgaactacacttgcattctaagctttacatttagctatatattggaattatactgatttctgttggtgtactgcagtgagtttgaggaattggaagctgttcctacatccgctgctatagatggcccccttgaaccttcttcgtcgtccactgttctagtttctaatgcccctgatgaatcattgactgattatttcagtgtatgttctctcctttaaactccctgctattgcattctaccttttattttttttcatgttcatcaaataatatacaatagcttgcctcagatcctagtaaatctttatttgcatcttgattgctacatttgtactagtatattgcttcttaccagtcacacatgtatatatgtttgtactgtcagtcttgtcacaatattgagttctgttctgaacaaatctgcagggcgctgttaatgttgggaatgtatcaattacaccaatggttggaagaactcatcagcctatcgagtctgttgcatcctcacacgtaccattgatcatcccatctgctgctcctacacatcaaatgggtgttccttcaggggctgcgtcagctccaccactgcccgtcattgacactaacgttcattctagccactcaacaaatcttgtaactccagccttttttgcacctccctcatcgtcttctgcatcattggtggcaccagcttcatcctttatgcccacagcatcaccttttcatccaacttctgccgatgctcaccgtccagcatatggacatggtacaccccttcttcaaccccttccgccgccaacaccacctgcatcacttacccctgtacacaacgatgagcctgttatttcgagggataaagttaaagatgctctcctgaggcttgttcaggtatgtttcacattgacaaacacatggttgaataacctttttctttatatatttttaactcttttatctcatgcccaacagaacgacgaattcatcaatttgctctatcaggagttacagaatgcacatgcgtagactgcttactcagcctttatggagtgtctggccttgacgagagttcacctgttctttcgtagttttgtgtgctttagttctcaaaactttatgtacagctttggcttctttttatatcggatgtccgcgaagagattgtgcagctttgtcttgatgcattattgatgtagagtttttatagcaatggctggtagtatttcttccaaatggttgtacttgtatagtatttttgtttcctgttggaaactcgaaatcggaagctggactatgtgtggcaacgttaaaatactgtccattttgtgtgatatactgcacagttgccatttagatatttgatatcacacattttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0156400, RefSeq:Os12g0156400