Os12g0162500

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Revision as of 10:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0162500| Description = Similar to BZIP-like protein| Version = NM_001072756.1 GI:115487473 GeneID:4351576| Length = 3683 bp| Definition = ...")
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Gene Name

Os12g0162500

Description

Similar to BZIP-like protein

Version

NM_001072756.1 GI:115487473 GeneID:4351576

Length

3683 bp

Definition

Oryza sativa Japonica Group Os12g0162500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3152164..3155846

Sequence Coding Region

3152220..3152722,3152996..3153128,3155014..3155098,3155322..3155587

Expression

GEO Profiles:Os12g0162500

Genome Context

<gbrowseImage1> name=NC_008405:3152164..3155846 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3152164..3155846 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgggcggttcccgctgccgccggcgagcggaggggggcgggggcaccaccggcgggcgcactcggagacgttcctgcggctgcccgacgcggacctcctcctcgacccggagggggacttctccttctccgacctcgacttcccctccctctccgacgactccccggccatctccgacccgaccccgccgccgccgccgccgatggctgcgacccccgcgccggcgccgcggccaccgggtggggcgcacatgaggagcctctccctcgacaccgccttcttcgagggtttctcgttgcagggtgggggaggaggaggaggaggaggagggagtgggggaagtggtgggcataagaggagcgggtcgatggatggggtcaactcgccgttcgagggtgagtcggcgctctccggtgggctaccggactacgcgaagaaggccatgcccgcggagaggatcgccgagctcgcgctcatcgaccccaagcgcgcaaagagaattctggcgaacaggcagtcggctgcaaggtccaaggaaaggaagatcaagtacactagcgagctggagaggaaggtgcagacactgcagaccgaggccaccacgctgtctgcacagctcacgcttctccagagggatacatctggtttaactgccgagaatagagagctcaagctacggttgcagtccatggaagagcaagctaaactacgtgatgctctgaatgaagctctgcgagaagaagttcagcgacttaagatagcagcagggcaagctccaaacatgaacgggaatcccttcaatggtggactccaacagcagattccgccctattacacgcaacagcagcagcagcagcaacagatgccttatttaggcggccaccatgctcagcaacgccatccaagccatcagcagagctcatcaaatggcggccagtcgctgagtggtcagtccctaaacgactccatggatttcatgtga</cdnaseq>

Protein Sequence

<aaseq>MDGRFPLPPASGGGRGHHRRAHSETFLRLPDADLLLDPEGDFSF SDLDFPSLSDDSPAISDPTPPPPPPMAATPAPAPRPPGGAHMRSLSLDTAFFEGFSLQ GGGGGGGGGGSGGSGGHKRSGSMDGVNSPFEGESALSGGLPDYAKKAMPAERIAELAL IDPKRAKRILANRQSAARSKERKIKYTSELERKVQTLQTEATTLSAQLTLLQRDTSGL TAENRELKLRLQSMEEQAKLRDALNEALREEVQRLKIAAGQAPNMNGNPFNGGLQQQI PPYYTQQQQQQQQMPYLGGHHAQQRHPSHQQSSSNGGQSLSGQSLNDSMDFM</aaseq>

Gene Sequence

<dnaseqindica>57..559#833..965#2851..2935#3159..3424#cgctacgctcgccgcgccgccgcgggtggggagatttgaccggcgttgactccgggatggacgggcggttcccgctgccgccggcgagcggaggggggcgggggcaccaccggcgggcgcactcggagacgttcctgcggctgcccgacgcggacctcctcctcgacccggagggggacttctccttctccgacctcgacttcccctccctctccgacgactccccggccatctccgacccgaccccgccgccgccgccgccgatggctgcgacccccgcgccggcgccgcggccaccgggtggggcgcacatgaggagcctctccctcgacaccgccttcttcgagggtttctcgttgcagggtgggggaggaggaggaggaggaggagggagtgggggaagtggtgggcataagaggagcgggtcgatggatggggtcaactcgccgttcgagggtgagtcggcgctctccggtgggctaccggactacgcgaagaaggccatgcccgcggagaggatcgccgagctcgcgctcatcgaccccaagcgcgcaaagaggtgaggaaatcgcttgctgcttcctctactccattttgagttcagcaatttctagatccgcagggatgtgccttttgccccaatcttgtacagtgatactgcgatttcccatttcgaagaatatagttggagtcagtagtgggattgctgctgttcttggtgtttcctttcttgatctgggctatctgtgccttgcttgatttgtgatgtaattggggagatgtattggggcttgttgatttaggttaagcttgtgatggcgcttgtgtgcagaattctggcgaacaggcagtcggctgcaaggtccaaggaaaggaagatcaagtacactagcgagctggagaggaaggtgcagacactgcagaccgaggccaccacgctgtctgcacagctcacgcttctccaggtatggaactttgtttattccgagcgccagataagcctcctatattgtcttatctaatcagcttagtttgttagtcaattgttttgtttgacatgtattagttgtgcaaagttagagtaggttacacgaaactttaatgttttgactcaatgattgtcatgcatgtgaagaactgctgtaagcaaagctactgcttgaacctttttatgtttttagaagcataatagtatgttgctgtatcttgtccctttccttctagctaaagcggcttattgattgtttcaagcatgtgtgctaagttgtggatcttacttggggtgtcaaaacgagctatttgtgttactatgataatgtgttgaagaaagtgtgcaggaataacacgtaataatagcatgtagctttgcattgcataacattctatgaatttcattttttttatacaattctgttgtgggccagctttatttaaaaccaaataacagtttataagttagtacacaataaataatttgtctgcattgaatgcggcagttcgtttccttttgggttagcaacttagtgtcctacagtaaacttccagtatctgagctcagagctgcagaaagtttaggaagtggaatttttaaagcatgatagtcactagaatggaaatgtacaaataagaactttgttagtagaccatttattctacacatattttaggacacttcataagctaaagcataacttagttcttttttatttcaaactgatgttccttatggcaccttatgcatctagcacctgaatttattagattgatagttgcctagatatatgtggctttgtaaaaactagtgatagcactagtattccatggatgtcaaatggacagtgagatgtatggtaaatcatttttttgttagtaatatcaagatattctgaattttgttatggcactttgcatggtgcacaatgtaggacaagctgtagtgtatgaacacaatggagaacataataatagatttgacaagagcacaacattttttttcctttatcattaccttgttgcctgtgtaattgttgtagatgcgacaataagagtaggaattgaagcacctaatggtttaagaggtataagtatgtttgtagcgtgaacgatcgatcactcaccaaaaattgggctagtgatgaaccattttagagtgcagtttgattgatggaatcagacgggtcatgttaggatggagaaataagtgaccacagattgtaacatatgatgtctcactttcaagaaaacatgctagtgcttatcatataattagaacaaagcagtcatccagaaatcccatgaataaatgatattctaaaatgcgcctacttttatcatgatccttctgaagtcagcttattttttgtgacgataacagacatttttgctttatcttttttgagcaatgaaataatgtcagtggcttgtatgttctttggaatcttatattccttcaaccctttatgcagttctgtttgttcattgtataatttatttgatgagattcagagaactagagtgccatctaattatttatttccctatgaatacatagttttttttacttaatgttgtcaacttttacgtacagaggatatggatgctaacttaatattgctcattttagtacataatttgttgcacgtagcatttgcgtaaatttagtccgtagattgtcaagctttgaatcatcctatcgcacaacaccattttttgcatgctgctgatagtatctggtaggcaaattactcgccaatcctgtaagccaacagtttcttttgttctgtttgtgtatgtgatgtgtgccatctggtagtctcgaatctgattttttgcaattcacttgaaacccagagggatacatctggtttaactgccgagaatagagagctcaagctacggttgcagtccatggaagagcaagctaaactacgtgatggtatgcccttatcttttgttacttcatcatgtagcctttagtatgttgtgcaatactactacatggttgcctatgaagataaagtttcaaagcccaataaaatgtttgattctattggcatatatgttggtctgttgctctgttagtaagacaaaaattggacgtgctctgttttttctttgcccatgaagtatgttatggaaaaaatatccttctcatgcagctctgaatgaagctctgcgagaagaagttcagcgacttaagatagcagcagggcaagctccaaacatgaacgggaatcccttcaatggtggactccaacagcagattccgccctattacacgcaacagcagcagcagcagcaacagatgccttatttaggcggccaccatgctcagcaacgccatccaagccatcagcagagctcatcaaatggcggccagtcgctgagtggtcagtccctaaacgactccatggatttcatgtgaggagaagaaactcgggggcccctattaaaccatataccaactgcagctcagcattgtaaagatagctaatgtacaatgtaatgcatatgaatcattgaatagggtagctagccgttctttgtaccagtaaacagaagtaattcttgtatgacataatcctccctttccccctttgttcattcctggattaatgcctagactgagttaactatgttaaccatttaacacttgtcttgtaaagtggtcgtttgtaacagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0162500, RefSeq:Os12g0162500