Os12g0163300

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Revision as of 10:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0163300| Description = Armadillo-like helical domain containing protein| Version = NM_001072761.1 GI:115487483 GeneID:4351581| Length = 313...")
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Gene Name

Os12g0163300

Description

Armadillo-like helical domain containing protein

Version

NM_001072761.1 GI:115487483 GeneID:4351581

Length

3135 bp

Definition

Oryza sativa Japonica Group Os12g0163300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3207658..3210792

Sequence Coding Region

3207978..3208019,3208098..3208216,3208304..3208430,3208777..3208915,3209002..3209228
,3209390..3209523,3209660..3209831

Expression

GEO Profiles:Os12g0163300

Genome Context

<gbrowseImage1> name=NC_008405:3207658..3210792 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3207658..3210792 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtcggcagaggtggctgcttcttccacattcgggcctaccccagagatggagaagttcctgtgcgatctgctgcttgacacggcacagcccatcgctgaacgcttccgtgcgctcttctccctccgcaacctccatggtgatggcccccgctgcgccctcctccaagctgcaagggattcttctaacttgcttgcccatgaggctgcttttgcacttggacaaatgcaagatgctgaggctatccctgcgttagaggcagttctcaaagatctttcacttcatccaattgtccgccatgaggctgcggaagcccttggtgctattggcctggagaagagcattcccctgcttgaggagagtttagctgctgatcctgccgtggaggttcaggaaacatgtgagctggctcttaggcggatagaacaacaaaagaatgctggtgtttctgaaagcacaaccatttcaccatttctctcagttgatccagcattacctgcaaagcaaggactttcggtacaccaactaagggagattcttctcaacgaacaagaaagcatgtatgaacgttatgcggctctttttgcactaaggaatgatagcagagatgctgctgtttctgctatagttgcagctctaggtgccaaaagtgcccttctaaagcatgaggttgcttatgtgttaggtcagctgcaaaataaagctgcttcggatgcgctttccaccgtcctgaagaatgttgatgagcatccaatggtcaggcatgaagctgctgaggcccttggttcaattgcagatcaagaaagcattgcacttctggaggaattcgcgaaggatcctgagcctatagtctcccaaagctgtgaagtcgcgctcagcatgctcgaatacgagagatccggaaaatccttcgagtttttgtttctgcagactcctggggtgcagcaggagtcctga</cdnaseq>

Protein Sequence

<aaseq>MESAEVAASSTFGPTPEMEKFLCDLLLDTAQPIAERFRALFSLR NLHGDGPRCALLQAARDSSNLLAHEAAFALGQMQDAEAIPALEAVLKDLSLHPIVRHE AAEALGAIGLEKSIPLLEESLAADPAVEVQETCELALRRIEQQKNAGVSESTTISPFL SVDPALPAKQGLSVHQLREILLNEQESMYERYAALFALRNDSRDAAVSAIVAALGAKS ALLKHEVAYVLGQLQNKAASDALSTVLKNVDEHPMVRHEAAEALGSIADQESIALLEE FAKDPEPIVSQSCEVALSMLEYERSGKSFEFLFLQTPGVQQES</aaseq>

Gene Sequence

<dnaseqindica>2774..2815#2577..2695#2363..2489#1878..2016#1565..1791#1270..1403#962..1133#tgagaaagtgagaagtccattcggactgctgcgtgagaacaacgcgcgtacgggcggcgccgacttcgacgtcgacgcggactccctcctccacgctcgccggcggccggaagctcctccgggtgaaggtacggttggttcccgagcgagccccaaccctaaaacctttgacacgccgcccgcttcccttcctccagtccaccgatccaatttgagttttcttttttttttcttcttcctttttcctttgcgcttgttcgttggattggtgcttggttagaactcgttactccggccgcaacgtccagcggctattgtaatctggagagtgcttcaatactctgtggatgcgatgcgatgcgatggtgtttcgagttgtttttcgtttaagccagcaggtgtggtgtgcgggatttatgagaaagatatattcgatgattagcactaatttgatctgatttcgaccactgtgaaagttatcagatagaaatgagtagtatgtggtatgtaccaagcaatttatggtttggatgtatcatcattcagcatagtgtttcgtcaattcctttgtcgaatgcgtagttctcttccctccttagttattctttgctatacttgtcaatagcgatggtgtgtattcataactagtgatttgtgaacctggaaattgttgtgatgttagtcctttcattcttgacttgtatttgtgaatcatgattgctatatgttccatgtagatgttttcgagaaaaaatgtgttccatgtatattgtctatttataccaacctgctgtggtgattcctctacataaaagtatgtgatttgcttagtttggaggtgcctgagtcttctgtttctgattttccatattatgctttgttatgcgctttaatttctcaagattcatatgcctttttccccttttaggcgtcagattaccttgcagccaccaactaattcatggagtcggcagaggtggctgcttcttccacattcgggcctaccccagagatggagaagttcctgtgcgatctgctgcttgacacggcacagcccatcgctgaacgcttccgtgcgctcttctccctccgcaacctccatggtgatggcccccgctgcgccctcctccaaggtcttacctcactaactcacccactcatatcaatgataaagcttgttgtttagtgacaattattcattgatgaagactactagaataaaggagctttagaaagctaatatatttgactgtttgatgcattgctcagctgcaagggattcttctaacttgcttgcccatgaggctgcttttgcacttggacaaatgcaagatgctgaggctatccctgcgttagaggcagttctcaaagatctttcacttcatccaattgtccgccatgaggtagtaatacataagagtttaatgccatcttctacttttagtgctgcactatccgtttgagaagtaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatcaattgattaggctgcggaagcccttggtgctattggcctggagaagagcattcccctgcttgaggagagtttagctgctgatcctgccgtggaggttcaggaaacatgtgagctggctcttaggcggatagaacaacaaaagaatgctggtgtttctgaaagcacaaccatttcaccatttctctcagttgatccagcattacctgcaaagcaaggactttcggtacaccaactaaggtatgtctttgaggcagtcgtacactttgtttgttgtatttcatatgtattttcttgctagtactagtgtggtcaatatttttcagggagattcttctcaacgaacaagaaagcatgtatgaacgttatgcggctctttttgcactaaggaatgatagcagagatgctgctgtttctgctatagttgcagctctaggtgccaaaagtgcccttctaaagcatgaggtattcttgaatttcaactagtctctgtttgcatcttttttccacaagcatgaattatgctagtctcctctcttgttacagacaaaactaagcaattgtacctactcagctctattagtgttcaggatactcaagatactattttatttaagataaaggagaaggcaaatagcactaggattaactaggatcgatggcatatcgctccagattccagagtgcatatcgctttacaaatctctaaagatcatgctgatctacccgttgagataatgaaaaaaaattccatgttcttattgtttagatgcttgttttgttcttgaattcaattattttccttctgcaggttgcttatgtgttaggtcagctgcaaaataaagctgcttcggatgcgctttccaccgtcctgaagaatgttgatgagcatccaatggtcaggcatgaagctgctgaggcccttggttcaattgcaggtaactaatactgcaagatttgttaagtctcatattgagcgtccatatttcatagttttctgagggtactcccactgtcatctacagatcaagaaagcattgcacttctggaggaattcgcgaaggatcctgagcctatagtctcccaaagctgtgaagtcgcgctcagcatgctcgaatacgagagatccggaaaatccttcgaggtatattccctagatcaacagaaataacctttgtgcctttgtggtatcgtctaaccggcttgtgtttgttccatgcagtttttgtttctgcagactcctggggtgcagcaggagtcctgagtaagatagatatatctactccaggcttctatatcgatctactgccaagctgaccgacaaattttgtcatcaattttgtcaagacgcttcactcctatcaatagttataccataagagtgtttgttgcttatgtttttcaccactattgtttctcctggtctcctgctgcttatgtcttggaccatgagagtcaaaacagctagtaagaatttacctgagaattttcggtttcatggtaactagaaataccatgtaaaactttacacagatagtcaatgatgtatcgacatagcaacattaaatattgaaggacttcatg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0163300, RefSeq:Os12g0163300