Os12g0163700

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Revision as of 10:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0163700| Description = Similar to Actin 7 (Actin 2)| Version = NM_001072765.1 GI:115487491 GeneID:4351585| Length = 3027 bp| Definition = ...")
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Gene Name

Os12g0163700

Description

Similar to Actin 7 (Actin 2)

Version

NM_001072765.1 GI:115487491 GeneID:4351585

Length

3027 bp

Definition

Oryza sativa Japonica Group Os12g0163700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3230579..3233605

Sequence Coding Region

3230854..3230919,3231373..3231995,3232455..3232551,3232603..3232848,3233001..3233060

Expression

GEO Profiles:Os12g0163700

Genome Context

<gbrowseImage1> name=NC_008405:3230579..3233605 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3230579..3233605 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgacggcgaggacatccagccccttgtctgcgacaatggcaccggcatggtcaaggccgggttcgcgggcgacgacgcgccgcgggcggtgttcccgagcatcgtgggtcgcccccggcacacgggggtgatggtggggatggggcagaaggacgcatacgtcggggacgaggcgcagtcgaagcgggggatcctgacgctcaagtacccgatcgagcacgggatcgtgagcaactgggacgacatggagaagatctggcaccacaccttctacaacgagctccgggtggcgcccgaggagaagatgacccagatcatgttcgagagcttcaatgtccccgccatgtatgtcgccatccaggccgtgctctccctctacgccagtggccgcaccacaggcatcgtgctggactccggcgacggtgtgagccacaccgtgccgatctacgaaggctacgccctcccgcacgccatcctccgcctcgacctcgccggccgcgacctcaccgacgccctgatgaagatcctcaccgagcgaggctactccttcaccaccaccgccgagcgggagatcgtcagggacatcaaggagaagctcgcctacgtcgccctcgactacgaacaggagctcaacgccgccgccgccgccaagaacagcagctcggtcgagaagagctacgaactgcccgatggccaggtgatcaccatcggggccgagaggttcaggtgccccgaggtgctgttccaaccgtcgctcgtcggcatggaggcggccgggatccacgagacgacctacaactcgatcatgaagtgcgatgtggatatcaggaaggatctgtacggcaatgtcgtgctgagtggtggatcgaccatgttccccgggatcgcggaccggatgagcaaggagatcaccgcgctggcgccgagcagcatgaagatcaaggtggtggcgcctccggagaggaagtacagtgtctggattggtggatccatccttgcctcccttagcaccttccaacagatgtggatctccaaggctgaatatgacgaatcaggcccagcgattgtccaccggaagtgcttctaa</cdnaseq>

Protein Sequence

<aaseq>MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE KMTQIMFESFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI LRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQELNAAAAA KNSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVD IRKDLYGNVVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL ASLSTFQQMWISKAEYDESGPAIVHRKCF</aaseq>

Gene Sequence

<dnaseqindica>2687..2752#1611..2233#1055..1151#758..1003#546..605#aagctctcctgcctagttcttctgcacctcctccatctccatctcggtggaggtttcaggcaggcaatctcccggtaagaacaaccaaaaatattcttgaatctgtttgtgcctttctttctcagattctttgtgctatattttggccatgtaaatgtaatatttgactgcagttcgaatccagttcataaggccaaattataatcttcttgcactgccatctttccaaggctaatcaattaagctgaagcttacatgctgtggtgtgttcatacagtttgttaggacttgattacataaaaaaactagaatatgttaggacttgatttataccctagatgtataggatcaagtttaacatttgtgatgacaaaaacatccattttaattcttcagtgatcatgactgcattgccttgttactactaaataaatagattgtccatattgttcttaatcaatcgatatagtcttactgcattggaactaatagatcatggtccattttgtcctgaatcaacagatatataatctctgaagaatcaaatggctgacggcgaggacatccagccccttgtctgcgacaatggcaccggcatggtcaaggtcatcatcatcatcaactcaatccaattaaccacctctcacaaatcacaacaacaacaacaaaccataccttatgttcttgcgttcaaaaaattcagtaaacaacaacaacagcaacgataaaccattgataataataatccaaaattcaggccgggttcgcgggcgacgacgcgccgcgggcggtgttcccgagcatcgtgggtcgcccccggcacacgggggtgatggtggggatggggcagaaggacgcatacgtcggggacgaggcgcagtcgaagcgggggatcctgacgctcaagtacccgatcgagcacgggatcgtgagcaactgggacgacatggagaagatctggcaccacaccttctacaacgagctccgggtggcgcccgaggagcacccggcgctgctcaccgaggcgccgctcaaccccaaggccaaccgggagaagatgacccagatcatgttcgagagcttcaatgtccccgccatgtatgtcgccatccaggccgtgctctccctctacgccagtggccgcaccacaggtaacgcaaatttaaaatttcattttcgaaatttgatttatttctttttttttttttgaggggggttgtccttaaatactatcttcgtctaaaaatataagaatctaggatggattggatattgatattttctagtatagggagtatgaaatattccatccggttctatattattatattttagaacggagggagtagatgacgtcctaaaatacgtacagtcaaacctcaaaattttaaattattaatgtatgaaaaatattactaaatttattattaaaagcactttcgtttagttatattctttcttagtagctattacaaatatttagttacaaagagtaaaagatagtagtaagtggtaaccatcctgttgccgttcataaatttcaaaattttgtccttcatattagtgagatttgaaaaagaaaataaaattgttcatcttgttttaattaggcatcgtgctggactccggcgacggtgtgagccacaccgtgccgatctacgaaggctacgccctcccgcacgccatcctccgcctcgacctcgccggccgcgacctcaccgacgccctgatgaagatcctcaccgagcgaggctactccttcaccaccaccgccgagcgggagatcgtcagggacatcaaggagaagctcgcctacgtcgccctcgactacgaacaggagctcaacgccgccgccgccgccaagaacagcagctcggtcgagaagagctacgaactgcccgatggccaggtgatcaccatcggggccgagaggttcaggtgccccgaggtgctgttccaaccgtcgctcgtcggcatggaggcggccgggatccacgagacgacctacaactcgatcatgaagtgcgatgtggatatcaggaaggatctgtacggcaatgtcgtgctgagtggtggatcgaccatgttccccgggatcgcggaccggatgagcaaggagatcaccgcgctggcgccgagcagcatgaagatcaaggtggtggcgcctccggagaggaagtacagtgtctggattggtggatccatccttgcctcccttagcaccttccaacaggtaaaattttgattactactccctccgtttcatactatgagtcgctttgactttttttctaatcaaatttatttaagtttgactaagtttatagaaaaatttagtaacatctactaggtcaaattagtttaattaaatataacattggatatattttcacaatatgtttgttttgtgttgaaaatattgttatatttttctataaactggtcaaactttaaaaagtttgactaggaaaaatatcaaatcgacttataatatgaatttttctctctttttgaaacttgccaattcattcaggaagaagagaaatgaaaggctacatgttttggttgcacaaatatgatttttttttcatgttcttggtactattttttttaaaaaaatgaattaaaatgtttccgtgttcttggtactaattaacagcgcactatgatgtttattgtgcaacagatgtggatctccaaggctgaatatgacgaatcaggcccagcgattgtccaccggaagtgcttctaagttcttggtcttatttattctcaagttcttgccgggtttccaatgagatatattgttgagtttgtctgtttgagcagtgctgaatcatacatggccatattagagttcctgttgatgccaggtttgttgctagtattgaggaatttgaactatccaccactatcttttgtaatagtaattgcgtcacctgagccacattatcattcttctgtatattcataattcatctgcgtgagttgtaatttactgcatatatatagaacatttgtttcatg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0163700, RefSeq:Os12g0163700