Os12g0165200

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Revision as of 10:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0165200| Description = HSP20-like chaperone domain containing protein| Version = NM_001072771.1 GI:115487503 GeneID:4351591| Length = 1815 ...")
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Gene Name

Os12g0165200

Description

HSP20-like chaperone domain containing protein

Version

NM_001072771.1 GI:115487503 GeneID:4351591

Length

1815 bp

Definition

Oryza sativa Japonica Group Os12g0165200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3316648..3318462

Sequence Coding Region

3316867..3318173,3318250..3318361

Expression

GEO Profiles:Os12g0165200

Genome Context

<gbrowseImage1> name=NC_008405:3316648..3318462 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3316648..3318462 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacctggacctcgccgtgcaagtctcccgccggccagtctccggcgaggacttcgccttcgccacctccgacaccgacgccgccttcctcgtcctcgcccacctccccgggtatgacaaggaggaggtggaggtggtcgtcggcgatggcgggagggaggtgggcgtggtcgtcggcgcgaggaaggatgacgcgttcgcggtggaggcggcggtggtcgggaggcgcctccgggtggcgcaccggcaggtggtggaggggttctgcagggtgttcgacgtgccgccaggcgtcgaggtggggcggatcaccgtcgggttcgaggaggacgacgagttgctcgtcgtcatcatgccgaaattccggccggcgccggcggtgagcggcggcgatgaggggcggcggctcgacgtcgagagcgcggactcggagtgtgggtcgtccgacgtcgaggacttcgatgtcgagtccgggccgagggagcggcaggacgacgacgtcgccgtcgagacggaggttgagctcgacgacgacgacgacgacgaggacgagctatccagcctcgagttggagtacgaggactggatcaacgtcgactcgtcggagtcggagccggagccggagccgccgcgcgacgtggcggtggagacgccggtggcagtggaggaggaggtggcggtggaggaggaggtggcggtggagacgccggtcgcggtcgaggagccgccgccgccgccgccgccgtcggtggtcgacatcgagtgcgacgtcgtgttcgagccggcgtaccgggagctgccggtggagacgccgatcgaggtggtcggcccgcctcacgccgagccggagcccccctccgacgtccccgacccgatcgacatcctctgcgtcgtcgaggagcccaagccgccggccaccgtggacgagcccgagcagccgaagccaccggccgccgtagaaccaccggtgcaagaaccaccagctgaagagacgccgacggcgacagagccagagccagagccaccggcggcggaggaaccacccgccgccgagccggagcaagagcctcaaccggagacgccgccagtagaatcagagacgccggcggaagaacaggcgccggtgcaagagccaccggcggcggacgagacaccagccgccggcgaaccggaggagcagccaaaaccacggtccagtgacagcgaggattacagcacgtcgggggaagaaggagacggcgcgaaccggggcggtggccgtcgccggcccagggggcaggggccgcggcggcggcggcgcaggaggcgcggcgggttcccgctggggatggtggtggggcccgcggtgatcctgctcgcgctcgccgcggcggcggccaggaggcggcggcagcagcgcggggcgggcgggcagtga</cdnaseq>

Protein Sequence

<aaseq>MDLDLAVQVSRRPVSGEDFAFATSDTDAAFLVLAHLPGYDKEEV EVVVGDGGREVGVVVGARKDDAFAVEAAVVGRRLRVAHRQVVEGFCRVFDVPPGVEVG RITVGFEEDDELLVVIMPKFRPAPAVSGGDEGRRLDVESADSECGSSDVEDFDVESGP RERQDDDVAVETEVELDDDDDDEDELSSLELEYEDWINVDSSESEPEPEPPRDVAVET PVAVEEEVAVEEEVAVETPVAVEEPPPPPPPSVVDIECDVVFEPAYRELPVETPIEVV GPPHAEPEPPSDVPDPIDILCVVEEPKPPATVDEPEQPKPPAAVEPPVQEPPAEETPT ATEPEPEPPAAEEPPAAEPEQEPQPETPPVESETPAEEQAPVQEPPAADETPAAGEPE EQPKPRSSDSEDYSTSGEEGDGANRGGGRRRPRGQGPRRRRRRRRGGFPLGMVVGPAV ILLALAAAAARRRRQQRGAGGQ</aaseq>

Gene Sequence

<dnaseqindica>290..1596#102..213#aaacttggcgccaatttagcaattaacagaaaaaccaaccacgcatatggcagcagcagcagcaactctcgccacggaaaatgctagtagtatactaggccatggacctggacctcgccgtgcaagtctcccgccggccagtctccggcgaggacttcgccttcgccacctccgacaccgacgccgccttcctcgtcctcgcccacctccccggtagtaacccatgctccgccgccgccgttgaattgacattggtgtgagatttttgtgtttttgtgtgtgtgtgcagggtatgacaaggaggaggtggaggtggtcgtcggcgatggcgggagggaggtgggcgtggtcgtcggcgcgaggaaggatgacgcgttcgcggtggaggcggcggtggtcgggaggcgcctccgggtggcgcaccggcaggtggtggaggggttctgcagggtgttcgacgtgccgccaggcgtcgaggtggggcggatcaccgtcgggttcgaggaggacgacgagttgctcgtcgtcatcatgccgaaattccggccggcgccggcggtgagcggcggcgatgaggggcggcggctcgacgtcgagagcgcggactcggagtgtgggtcgtccgacgtcgaggacttcgatgtcgagtccgggccgagggagcggcaggacgacgacgtcgccgtcgagacggaggttgagctcgacgacgacgacgacgacgaggacgagctatccagcctcgagttggagtacgaggactggatcaacgtcgactcgtcggagtcggagccggagccggagccgccgcgcgacgtggcggtggagacgccggtggcagtggaggaggaggtggcggtggaggaggaggtggcggtggagacgccggtcgcggtcgaggagccgccgccgccgccgccgccgtcggtggtcgacatcgagtgcgacgtcgtgttcgagccggcgtaccgggagctgccggtggagacgccgatcgaggtggtcggcccgcctcacgccgagccggagcccccctccgacgtccccgacccgatcgacatcctctgcgtcgtcgaggagcccaagccgccggccaccgtggacgagcccgagcagccgaagccaccggccgccgtagaaccaccggtgcaagaaccaccagctgaagagacgccgacggcgacagagccagagccagagccaccggcggcggaggaaccacccgccgccgagccggagcaagagcctcaaccggagacgccgccagtagaatcagagacgccggcggaagaacaggcgccggtgcaagagccaccggcggcggacgagacaccagccgccggcgaaccggaggagcagccaaaaccacggtccagtgacagcgaggattacagcacgtcgggggaagaaggagacggcgcgaaccggggcggtggccgtcgccggcccagggggcaggggccgcggcggcggcggcgcaggaggcgcggcgggttcccgctggggatggtggtggggcccgcggtgatcctgctcgcgctcgccgcggcggcggccaggaggcggcggcagcagcgcggggcgggcgggcagtgaagtgactgacgccggtgttgctccgctcggtcgccggagttcggcgacgcgaacatgacgtaattgtgtgacgtgttaggcgtcttttgtgtgctttacgcgttcgtttcttggtggcgtattgttgtgctgtgtaaaacggatttttcgtgtgattgatagtatttcagcctgagcaacacaagtatatgcatgtgcccctattgggctgttcggtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0165200, RefSeq:Os12g0165200