Os12g0169700

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Revision as of 10:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0169700| Description = Similar to Ferripyochelin-binding protein-like| Version = NM_001072797.1 GI:115487555 GeneID:4351619| Length = 3429 ...")
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Gene Name

Os12g0169700

Description

Similar to Ferripyochelin-binding protein-like

Version

NM_001072797.1 GI:115487555 GeneID:4351619

Length

3429 bp

Definition

Oryza sativa Japonica Group Os12g0169700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3548223..3551651

Sequence Coding Region

3548394..3548508,3549287..3549430,3550092..3550217,3550473..3550624,3551123..3551407

Expression

GEO Profiles:Os12g0169700

Genome Context

<gbrowseImage1> name=NC_008405:3548223..3551651 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3548223..3551651 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaccctcgggcgcgcgatctacacggtggggaagtggatccgcggcacggggcaggccatggaccgcctcggatccaccatccagggcggcctccgcgtcgaggagcagctttcaaggcatcgcacgatcatgaacatatttgagaaagagcccagagtccacaaggatgtttttgttgctcccagtgcagctgtgattggcgatgttgagatcggacatggatcctcaatctggtacggctccattttaagaggtgatgtcaacagcattcatattggatctggatcaaatatacaagacaattcccttgtacatgttgcaaaagctaacatcagcgggaaggttctcccaaccataattggaaacaatgttacaataggtcatagtgctgttctgcacgcatgcaccgtcgaggatgaagcttttgttggtatgggtgccactctgcttgatggagtggtcgttgaaaagcacagcatggttggtgcaggatcgcttgttaagcagaacacaaggattccttctggagaggtctgggtcggtaatcctgccaagttcctaagaaagcttactgaagaggagatagcgttcattgctcagtcagcaacgaactacatcaatctggcccaagtccatgctgccgagaattccaagaccttcgacgagatcgagctcgagaagatgctgaggaaaaagtatgcccacaaagacgaggagtatgattcgatgctcggcgtggtccgtgagatcccgccggagctcatcctcccggacaacatcctcccaaacaaggctcagaaggctgttgctcactga</cdnaseq>

Protein Sequence

<aaseq>MGTLGRAIYTVGKWIRGTGQAMDRLGSTIQGGLRVEEQLSRHRT IMNIFEKEPRVHKDVFVAPSAAVIGDVEIGHGSSIWYGSILRGDVNSIHIGSGSNIQD NSLVHVAKANISGKVLPTIIGNNVTIGHSAVLHACTVEDEAFVGMGATLLDGVVVEKH SMVGAGSLVKQNTRIPSGEVWVGNPAKFLRKLTEEEIAFIAQSATNYINLAQVHAAEN SKTFDEIELEKMLRKKYAHKDEEYDSMLGVVREIPPELILPDNILPNKAQKAVAH</aaseq>

Gene Sequence

<dnaseqindica>172..286#1065..1208#1870..1995#2251..2402#2901..3185#gggctcatctctctctctctcactcttctccctcttctcaccaccagacgccatcaaacccctacctcccgcggcggcggcggcggcggcggccggcggcgagctccggacagacagaggagggcgcgagcggagagggcgaggagggaaggagggagggaggcgacaggcatggggaccctcgggcgcgcgatctacacggtggggaagtggatccgcggcacggggcaggccatggaccgcctcggatccaccatccagggcggcctccgcgtcgaggagcagcgtaagcaccagcatcttcccccccgctctcccttcccccctcgttaactaccgcgcaccacctgctcgtcttcgttttcctcctcctccggagaggagaggaggaggatcgggcctgcgaggtcgaaatcgtttcgatttcgttgtcaaagtctttggcccaatattgggagagttcgtcgctctagttgttgattaattggtactagcagccgtacacattcttcacaacccctttgtggtttggttgttattgggaaggggaaacgggttccttccttcgtgtgtattcaagtatcgtcgtcggtgattcgtcaagtgctgcatttgaagttttcgattagtgattctcgtctgtgtatcgaaacagcagcaagtaaatcaaagatttcacttgcacataattgttattattgtggttatactgaccaattggaatgtcgcattggcatgccgatttcgagtgtttattttctgttccctagcatcatgaagaatgccattttcccctctagctctagttggggtgtgttgctgtagttggttctgattaatcatcaccattctgcaacaggcaaatggccagaaattagcgtagatatgaatataggcacattatgacgagggggggcatcttttgttattttttcgggtgttgtgcatttagcttgatagatcagtttacaacttcgctaagtgtatgacttcttcacttagatacatgaattttatgcctgatcctgagtaacatgttagcgttttttgtatgccattgtcagtttcaaggcatcgcacgatcatgaacatatttgagaaagagcccagagtccacaaggatgtttttgttgctcccagtgcagctgtgattggcgatgttgagatcggacatggatcctcaatctggtacggctccattttaagaggtaagctctttgtcaataaacactagtattgatacatgtgctactaataagcatgggctttgtcttgataattatatatctcacctttcttcttggcaacaagtatgtttactgtgcattttgttttcagagtaaacttgcttctaactgcacttcatctattgctatggtatatagaaaactgacataactgccagttgtcaggagatgcacagttttatcaaagcacaccatgttttcattgttagactctcaatcgacacttcgcatgaaacttcagttttttacctttattcgacgaagtgtcaatcagggtttatcctaccgctagtagactatttactgacctccggcagtagcacgattaccgcaacaaattcgtattccaaattttgaactccctgcagtaatacacggttacgtgcggtaaccactgtgtgtcgaagctggaagaaaaagaatgcaggaaaaattgtaaaacgtagtaagaagtaatagacttgtatcgtagtgttaagtatttgtgctgtcatacttacttggttaacccaagcatattgatatttttaagtttcagtaattataatgttgaagttgtactgtagatatttccagtgttcagtgataaccattttagctccttttcgttgtttgtcctcaggtgatgtcaacagcattcatattggatctggatcaaatatacaagacaattcccttgtacatgttgcaaaagctaacatcagcgggaaggttctcccaaccataattggaaacaatgttacaataggtcagtagagcacttcctatcttatttcgtaataattttggtacacagtttacactgtgatatgctattgatattgcgatttggtttttctggaagacattaatcacgtggcatcgtttatacatgatagaatcggatataaattgttttcattgcagcgttgtgattgattcattaactaaaattctgaacttcatttttccttggactactcactgtgttatgctcccaactaaactaataagcctccaccaggtcatagtgctgttctgcacgcatgcaccgtcgaggatgaagcttttgttggtatgggtgccactctgcttgatggagtggtcgttgaaaagcacagcatggttggtgcaggatcgcttgttaagcagaacacaaggattccttctggagaggttaccttcttattctcttgctaagcaagttttcttttttttttctttttcacttgctatatgggaaatatgcactcaactgccagcattttgtaatgagggaattctcagacactgatatacgatgcttacaatcgttctttgttccacaacatatctaatcgtttggataatggaattgagtgattccaaggtagaggtttagtctacatatttatttttccaaagaacaattactttaaagttacaatgcattgatgacatatttacatgaatctgtgtagtttttctttccttatttcaaaacctgtaattggggactggaggataaccaaagtaccaaacaacgctgcatgtttatactgatgtccatattttacgttccatgctattgctatgaacagctgcgagacttgaatatcttttggtatttatattgtatataacttaatatattacatgactttattgaaccatatggtttcttgacactgctaggtctgggtcggtaatcctgccaagttcctaagaaagcttactgaagaggagatagcgttcattgctcagtcagcaacgaactacatcaatctggcccaagtccatgctgccgagaattccaagaccttcgacgagatcgagctcgagaagatgctgaggaaaaagtatgcccacaaagacgaggagtatgattcgatgctcggcgtggtccgtgagatcccgccggagctcatcctcccggacaacatcctcccaaacaaggctcagaaggctgttgctcactgaatgttttgtcaagctcccgcttgggaaaagcttggtttttttgttacgtgttttgacctggaacaacatttgacacatgtcttttgatctcattgtctgtttttcaagcccaataagaatttgggtcgagcattgttttaggatcgaccatatacagtacctctctttgcattacaatgaagagcagttaatttgggtcactttttacatctttactgaagtagaaacgcgtcctctgtctgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0169700, RefSeq:Os12g0169700