Os12g0170600

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Revision as of 10:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0170600| Description = Similar to Alpha-1,4-fucosyltransferase| Version = NM_001072804.1 GI:115487569 GeneID:4351626| Length = 3926 bp| De...")
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Gene Name

Os12g0170600

Description

Similar to Alpha-1,4-fucosyltransferase

Version

NM_001072804.1 GI:115487569 GeneID:4351626

Length

3926 bp

Definition

Oryza sativa Japonica Group Os12g0170600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3582480..3586405

Sequence Coding Region

3582527..3582997,3583044..3583163,3584691..3584864,3585412..3585981

Expression

GEO Profiles:Os12g0170600

Genome Context

<gbrowseImage1> name=NC_008405:3582480..3586405 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3582480..3586405 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atcctcctacctatcgcctccccctcctccgagaccgagatctcgcgctccggcgaggaggcgaagcttccagaagcttccggaggaggaggaggggcgcgccacctcgatgctcttcccgaagcggatcaactacatggccccgatgctggcctccgccgtcatcctcctcctcctcgtctccggctacttcgagctcccgtccatctcctcctactccgccgcgccggcgccgccgctcttcgccacggcgctggacgccgtcggcacccgcgagcggtcgccgttcacgtcgcttctctcggccttcgccgactgggacgccgccgtcgggtgcccgcgcatccgcgccaagctcgacgccgtgggggcgcccgggtacggcgccaactcgaccgcggcggcggccgcgtcgatcaccggcggggccgggtggggcggcggcggcggcgggaggtgcgagggcgtgaggacgcgctcgacggggtgtacacgtgccggtgcggggtgagctgcgtgtggagcaagtccgccgccgccgtcgaccggcccgacgcgctgctcttcgagggcgccacgccgccgccgcagagaatgaaaggcctgcctcttcgtgtatatctggatctggaggctgctaggaaaccaactggtttcgaggacatttttataggttaccatgctaaagatgatgtgcaagtaacatatgctggaaaatcattccacactagccgaagttaccatgtatcaactgaaaagagaaatgatgcacttatttactggtcatcttcaaggtgtcttcctcatagagacaaggttgcaaaagatttcctgtcattggttccgcaccactctttcgggaaatgcttgaataatgttgatggtcctgacatggcattatccatgtatccagtttgttcaaccaatgataatggaaaaccacactggtgggatcatcttcactgcgcaatgtcacattacaagtttgttcttgcaattgagaatactaagacagaaagctatgtgaccgagaaattgttctatgccttggaggctgggtcagtgccaatatacttcggggcacccaatgtctgggacttcattcctcccaattctattatagatgcctcaaaattcagctcactccgtgagttggcatcatatgtgaaagctgttgcaaatgatcccgtagcctatgcagaataccatgcatggaggaggtgtggtaccctgggtaactttggaaggtcgcgtgaaatgagccttgacacactgccttgccgactttgtgaactagttagtaagagaggtggtagaaatgcagatgcattgtga</cdnaseq>

Protein Sequence

<aaseq>ILLPIASPSSETEISRSGEEAKLPEASGGGGGARHLDALPEADQ LHGPDAGLRRHPPPPRLRLLRAPVHLLLLRRAGAAALRHGAGRRRHPRAVAVHVASLG LRRLGRRRRVPAHPRQARRRGGARVRRQLDRGGGRVDHRRGRVGRRRRREVRGREDAL DGVYTCRCGVSCVWSKSAAAVDRPDALLFEGATPPPQRMKGLPLRVYLDLEAARKPTG FEDIFIGYHAKDDVQVTYAGKSFHTSRSYHVSTEKRNDALIYWSSSRCLPHRDKVAKD FLSLVPHHSFGKCLNNVDGPDMALSMYPVCSTNDNGKPHWWDHLHCAMSHYKFVLAIE NTKTESYVTEKLFYALEAGSVPIYFGAPNVWDFIPPNSIIDASKFSSLRELASYVKAV ANDPVAYAEYHAWRRCGTLGNFGRSREMSLDTLPCRLCELVSKRGGRNADAL</aaseq>

Gene Sequence

<dnaseqindica>48..518#565..684#2212..2385#2933..3502#aaaagagcccctcgaaaaacttttaattccactccacctaatcctgaatcctcctacctatcgcctccccctcctccgagaccgagatctcgcgctccggcgaggaggcgaagcttccagaagcttccggaggaggaggaggggcgcgccacctcgatgctcttcccgaagcggatcaactacatggccccgatgctggcctccgccgtcatcctcctcctcctcgtctccggctacttcgagctcccgtccatctcctcctactccgccgcgccggcgccgccgctcttcgccacggcgctggacgccgtcggcacccgcgagcggtcgccgttcacgtcgcttctctcggccttcgccgactgggacgccgccgtcgggtgcccgcgcatccgcgccaagctcgacgccgtgggggcgcccgggtacggcgccaactcgaccgcggcggcggccgcgtcgatcaccggcggggccgggtggggcggcggcggcggcgggaggtgcgagggcgtgaggacgcgccacgtcggggtgctcgtcaaggggtggacgtggatccccgacgcgctcgacggggtgtacacgtgccggtgcggggtgagctgcgtgtggagcaagtccgccgccgccgtcgaccggcccgacgcgctgctcttcgagggcgccacgccgccgccgcaggtagccactgggattctcacttcgctggtcaattcctgtgaattccatactttcctgttaattatggacaaattcatacacttctttatctggtaagggttgtgtggcggaattgaagaattcgcgaatgcaatttttcactttcagtgttataggtgtaaaagggcaatgctcgagtgtgatgatagttcagctggactaacaagttccttaggtcatgttcggttaatccccatgagagagggattggagaggatttattccacacctactgtggtgtgaaattattccccctcaatcccctccaatcctcttcaatcccctccaaaccgaacaaggccttaataaaattcttcgagtgttaatgcatatctggaagtactatcagttagagaaacaaccttacttaattgtgccagttttttttaattcctatagattgcttgcccccttttctgcttttgtatcttagtggcattgccaagtaataacttggtagttttcagagggtcatacatcctcagctagacttgaaacaggtcgcttgttgcgtgggctatagccgcaggcagttattttttgctggctaggcaatgcgtctcactgatccaaaagcacccttagtttgtaaatattgcgtactcttggattgcgttgctaactattgaaatatggacatattgctgttcattctcccagagttatccctcaaacacatgatgaacggagtaatcttgtatggtatccaggttacgtgaaatcagcaacatttggttgatgttcccttctctcataaagtcagaagcaacagcatggtattcctctctgttttcgttttgggcttggtgtttaggagcctcatgccaccgaagtggttcatcctgtagtgttggctgtgttgcagcccctgccttcatcacttctttgacattcgctccctgaaggcctgtccaaaattccaggaatgaaaaagcacaatgtcctcagcaggagatcagatcatcttattccgaagacatgctcagttttgatgcttccttattacccagcaaatggttgtatgtcgtgctaatgaaccttgtagccatatggcaaatgatgtctaatgcaccacatatatttcctaaaagactctagccgttgacctgcctggcccaaatggaagtgccaacaactgcctaggcacatatagccaccatacaataaaaaaacccaatgattgttagtttcatcttgtcgaaaacagcatgaagagtctccacgaaaatatttgtggattcacatatatagtgccagtattgagtggcatgagttacaggcttacaattctgacaaaacttaatcatggaatcaaatacaattggtttttttactaaccattacataccatttccgttagtagtttagttctctttttcctgaggatactgtatttcattacttatgtaaggatgctgttttaaacaaagtaaatgttaacatctttctgatttccaagtttaacatattcttgaacatgttttgcagagaatgaaaggcctgcctcttcgtgtatatctggatctggaggctgctaggaaaccaactggtttcgaggacatttttataggttaccatgctaaagatgatgtgcaagtaacatatgctggaaaatcattccacactagccgaagttaccatgtatcaactgaaaagagaaatgtaagcccaacatgatgcttaactttccattcattgcgtattgccaataatatattatgtaaacatggcgcatgacatcattgttcctgactctgctagctcactgctcatcatagcatgataggattaagtgtgcgtagttgactgtagaagtataatattaagactttagcaggcaccagtgcaccacagctgcacaacctcacacatttaggtcgagctgttcccttcgatacttttttttttctgtatttcattttttctcatatttttattttaaacttcatacaattttcaactgccaacaagatccgattgtgtgtagtgttcaaaacaagttaacaacataactcagcgggggctaaggtgctcctgttacttaccggtatacctgaatgctttttgtaaatatgaaattgtggatgtctattgctttgttatttttgcacactctgagacacaatcagttctgctgtagtagtacttttttttttttaaaaaaagtttatttaatcatctcaatgtctgatctcctgtatggtgtcaggatgcacttatttactggtcatcttcaaggtgtcttcctcatagagacaaggttgcaaaagatttcctgtcattggttccgcaccactctttcgggaaatgcttgaataatgttgatggtcctgacatggcattatccatgtatccagtttgttcaaccaatgataatggaaaaccacactggtgggatcatcttcactgcgcaatgtcacattacaagtttgttcttgcaattgagaatactaagacagaaagctatgtgaccgagaaattgttctatgccttggaggctgggtcagtgccaatatacttcggggcacccaatgtctgggacttcattcctcccaattctattatagatgcctcaaaattcagctcactccgtgagttggcatcatatgtgaaagctgttgcaaatgatcccgtagcctatgcagaataccatgcatggaggaggtgtggtaccctgggtaactttggaaggtcgcgtgaaatgagccttgacacactgccttgccgactttgtgaactagttagtaagagaggtggtagaaatgcagatgcattgtgaattgtgatagactggttagtatcctgacttgcatactaatgttcactttgttgttaacatagtctgataaaactttcgtactacgaggtgatatttttgtggctatacttttgacgataatcaaatgacttgaactcaaatgcaggacatgtacctagttggtatgtcaatgaagatgaagtgctcggatatcagaagaaaatagtttgatattgttgtcataacacactttgtttcttttgcgttttttgaatttctttttgtctccagagttgagagatgtatacagtagttagggattcatgtttgtaggaaaaaaaaaaggtatgaatgcacattatatcgctaatattatacggtctttatgaccatctgtcatactgatgtcttgaagaaatgtgataatacagaatcagcattaact</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0170600, RefSeq:Os12g0170600