Os12g0173333

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Revision as of 10:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0173333| Description = TCP transcription factor family protein| Version = NM_001189882.1 GI:297728894 GeneID:9271589| Length = 2030 bp| De...")
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Gene Name

Os12g0173333

Description

TCP transcription factor family protein

Version

NM_001189882.1 GI:297728894 GeneID:9271589

Length

2030 bp

Definition

Oryza sativa Japonica Group Os12g0173333, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3708557..3710586

Sequence Coding Region

3708804..3710060

Expression

GEO Profiles:Os12g0173333

Genome Context

<gbrowseImage1> name=NC_008405:3708557..3710586 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3708557..3710586 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaccatggcggcggcggcggtggtgggggagcggcgccgtcgagcagtaatattggtggagggagcggcggcggtggtggtggtggtggcagggagaaccacccgcaccacccgttctactactccggtccggctgccgccgccgcggcggcggcggcggcgcagcagcagcagcagacgttcatgggcgcgctggcgataacgccggtggtcgctgagcagccgcaggggtcgtctggtggtggggagaagaaggtggtggcgccgacgaccccggcggcggcgggggcggcggcgacgacgacgctggcgaagcggccgtcgaaggaccggcacacgaaggtggatgggagggggaggaggatacggatgccggcgctgtgcgcggcgcgggtgttccagctgacgcgggagctggggcacaagtccgacggcgagaccatcgagtggctgctgcagcaggcggagccggccatcatcgcggcgaccggcacgggcaccatcccggccaacttctcctctctcaacatctccatccgctccggcgccgcctccgcctcctccgcctccaaccccaaccgcgcctcccccttcccggcgctggctcttcacccgcaccaccagcagcacgacgtgtccgccatgctcggctaccaccaccacctcctcccgccgccgcagcagcagcaggagtcgccccaggatcccggcggcgcgggcgcgttcatgaggaagcgatacagggaggacctcttcaaggaggacgacgaccgccaagatcccagcgcgcccaaggcgcgcgagcagcagccgacgacgccgcaggcggcggcggccgccgccgcggcggcggcaatgtgggccgtcgcgccgaacaccgcggcgcccggcggcgcgttctggatgctgccggtgtccgccagctcggccgctgccgcgcgccccaccgagcagcccatgtggtccttcgccggcggcggcggcggcgccgccacggtgcaggcgccgctccagttcatgtcgacgcgtgtcaactaccccggcagcgccggcgccggcatgtcggacaccaacctcggcatgctcgccgcgctcaatgcgtacaaccgcggcggcgccggagaccagcagccgcagcagcaaccggagatggaccagcagggccgcaacgacgacgacgacgatgacggcgacgacagcggcgacgaagacaacggcggcgcaaacaacaacaacaacaacagctcgcagtaa</cdnaseq>

Protein Sequence

<aaseq>MDHGGGGGGGGAAPSSSNIGGGSGGGGGGGGRENHPHHPFYYSG PAAAAAAAAAAQQQQQTFMGALAITPVVAEQPQGSSGGGEKKVVAPTTPAAAGAAATT TLAKRPSKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAI IAATGTGTIPANFSSLNISIRSGAASASSASNPNRASPFPALALHPHHQQHDVSAMLG YHHHLLPPPQQQQESPQDPGGAGAFMRKRYREDLFKEDDDRQDPSAPKAREQQPTTPQ AAAAAAAAAAMWAVAPNTAAPGGAFWMLPVSASSAAAARPTEQPMWSFAGGGGGAATV QAPLQFMSTRVNYPGSAGAGMSDTNLGMLAALNAYNRGGAGDQQPQQQPEMDQQGRND DDDDDGDDSGDEDNGGANNNNNNSSQ</aaseq>

Gene Sequence

<dnaseqindica>248..1504#aggcaaccccacctctccctgtctctctctctttctctctcctccctcctctcctctccaaccccaccggcggccaccaccaccccccccccccagccccatctccggccaccaccaccgtgtcctccacgtgttcccggaggcctccaactccggcgaccactcggaccacccgtgcggcggaaggactcgccgtattttccacttgcgggcttgggtggcggcggtttcttggtttcttgggaggatggaccatggcggcggcggcggtggtgggggagcggcgccgtcgagcagtaatattggtggagggagcggcggcggtggtggtggtggtggcagggagaaccacccgcaccacccgttctactactccggtccggctgccgccgccgcggcggcggcggcggcgcagcagcagcagcagacgttcatgggcgcgctggcgataacgccggtggtcgctgagcagccgcaggggtcgtctggtggtggggagaagaaggtggtggcgccgacgaccccggcggcggcgggggcggcggcgacgacgacgctggcgaagcggccgtcgaaggaccggcacacgaaggtggatgggagggggaggaggatacggatgccggcgctgtgcgcggcgcgggtgttccagctgacgcgggagctggggcacaagtccgacggcgagaccatcgagtggctgctgcagcaggcggagccggccatcatcgcggcgaccggcacgggcaccatcccggccaacttctcctctctcaacatctccatccgctccggcgccgcctccgcctcctccgcctccaaccccaaccgcgcctcccccttcccggcgctggctcttcacccgcaccaccagcagcacgacgtgtccgccatgctcggctaccaccaccacctcctcccgccgccgcagcagcagcaggagtcgccccaggatcccggcggcgcgggcgcgttcatgaggaagcgatacagggaggacctcttcaaggaggacgacgaccgccaagatcccagcgcgcccaaggcgcgcgagcagcagccgacgacgccgcaggcggcggcggccgccgccgcggcggcggcaatgtgggccgtcgcgccgaacaccgcggcgcccggcggcgcgttctggatgctgccggtgtccgccagctcggccgctgccgcgcgccccaccgagcagcccatgtggtccttcgccggcggcggcggcggcgccgccacggtgcaggcgccgctccagttcatgtcgacgcgtgtcaactaccccggcagcgccggcgccggcatgtcggacaccaacctcggcatgctcgccgcgctcaatgcgtacaaccgcggcggcgccggagaccagcagccgcagcagcaaccggagatggaccagcagggccgcaacgacgacgacgacgatgacggcgacgacagcggcgacgaagacaacggcggcgcaaacaacaacaacaacaacagctcgcagtaagctcgcaccatcaccatcacctctgaattcgccatgatcgtccattcatatcttggtaatggtgctagtggtttagaagcaagcatcaccttagggtttagaacttcttttgctgccattggattgggcaaaggaggaatcaatcaagaaaatggatcactacactagtgtcaatttgtgcaagaagcagagcaagacaaagcttatgttgagcaaagccaagagaagccaatgcaatgcaatgcaagagcaacacttcttgctagttcaattagccttgttaattaaatttttttgggggtattgtttttatttttgtattgtttgtttttttttttggattgatctatcaagattcaagaaccatttgtcttgttgagacgggtgtttgatgatgattagtagtgggtccaaattaggagggccaagaaaaaaggagtttgagagagaaggggaggatttgtacagttgatcatcttgatttatgctgttgcactgttaattaattctagtttatttttcattc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0173333, RefSeq:Os12g0173333