Os12g0178633

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Revision as of 10:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0178633| Description = Quinonprotein alcohol dehydrogenase-like domain containing protein| Version = NM_001189889.1 GI:297728908 GeneID:9267...")
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Gene Name

Os12g0178633

Description

Quinonprotein alcohol dehydrogenase-like domain containing protein

Version

NM_001189889.1 GI:297728908 GeneID:9267200

Length

2600 bp

Definition

Oryza sativa Japonica Group Os12g0178633, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3982252..3984851

Sequence Coding Region

3982252..3982799,3983093..3983158,3983286..3983337,3983533..3983690,3983792..3984851

Expression

GEO Profiles:Os12g0178633

Genome Context

<gbrowseImage1> name=NC_008405:3982252..3984851 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3982252..3984851 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctaaacgtgatctccccaccgccgccgtgcccccgacgacgccgccgccggcggcggcagcggcggcggcagcgccggtggataaaggccgcaccgacgacggcggcggcaaggaccgcgacgacgcgaccaagaaccaggagagcagcaaggaggtcgccgtcgtcgcggcgcccaaggatgccgcccccgcgtcgaacacccagaccggcgtgcagctggggctagaggagatcgagaagttcatcggcaacacccccatcgtgaagcacctgatgcggcgcggccagagccagcatcacagcggccagctcgcgtcgccctccggcggcgcgccgcccaaggccgagaagccggcgggcggcaagaagaagggaggctggctcaagaacatcaagtccgtcgccatcggcttcatcgacagcggcggcaacagcaagtcgaccacatccacgaccacctcctccgccggcgccaacgccacctcgtcgtcgtcatcctcggcgtcgtcgacggagcggctcaaggtgcaccaatccggcaagtcgtgcaaggagctcaccgggctgtacatgtgccaggagatcatggcgcacgaggggtcgatctggagcatcaagttcagcaccgacggccggtggctggccagcgccggcgaggaccacgtggtgcgcatctggcaggtggtggaggcgaactccccggcgtgcctgccgaacgacggccactcgggccccctcccgccgcatccccccggcgccgcgccggcggacgggacgtcgtcgtcgtcgacgccagcgctgtcccagctgtccaagaagtcggtgaaggggaagagcggcagggacacgctgccggagcacctcgtcgtccccgacaaggtgttcgcgctcgccgaccagccggcgtgcgtcctcgagggccaccaggacgacgtgctcgacctcacctggtccaagaccgaccagcttctctcctcctccatggacaagacggtgaggctttgggacaccaccaccaaggcctgcctcaaggtgttcgcccacaacgactacgtgacttgcatccagttcaacccggcggacgacaggttcttcatcagtggatcgctggacgccaaggtgcggctatggagtatccctgatcggcaggtcgtcgactggaccgacctcaacgagatggtcaccgccgcctcctacacccccgatggccagggcgccatcatcggctcgcacaagggtagctgccggttctacaagacaacaggaggcgcagatcgacatcgagacgaagaagcgcaagtcgcaggcgaagaagatcaccggcttccaggtttcaagaacacgagcagccagatctcggcggcgtacacgtcggacgggcggtacgtggtgtgcccgagcgaggactcgcacgtctacctgtggcgcgcggcgcgcggcgcgccgccggcggcggcggccatcggcagcatcggcggcatcggcatgaagcccaagacgtggtgcaccatccgctccttcgagaacttctactgcaaggacgtctccgccgccgtgccgtggccgctggccccctccggcgccggcggcgacgggtcgacctccggcagctcgccgtcgcggcggcagggcggcgtgtcgtgcaccgacgacgtgtgcagcatgccggcgaagagcggcgagctgggcagcgccgggacgccgctgacgcactccggccagctaggctcgccggcgccaggaggcggcaagggcggcgccgacggcaatgcgtggggattggtggtggtgacggcgagcttacagggcgagattagggtttatcaaaactttggaatgccgttcaggataagaggccagggtaacctgttctactga</cdnaseq>

Protein Sequence

<aaseq>MAKRDLPTAAVPPTTPPPAAAAAAAAPVDKGRTDDGGGKDRDDA TKNQESSKEVAVVAAPKDAAPASNTQTGVQLGLEEIEKFIGNTPIVKHLMRRGQSQHH SGQLASPSGGAPPKAEKPAGGKKKGGWLKNIKSVAIGFIDSGGNSKSTTSTTTSSAGA NATSSSSSSASSTERLKVHQSGKSCKELTGLYMCQEIMAHEGSIWSIKFSTDGRWLAS AGEDHVVRIWQVVEANSPACLPNDGHSGPLPPHPPGAAPADGTSSSSTPALSQLSKKS VKGKSGRDTLPEHLVVPDKVFALADQPACVLEGHQDDVLDLTWSKTDQLLSSSMDKTV RLWDTTTKACLKVFAHNDYVTCIQFNPADDRFFISGSLDAKVRLWSIPDRQVVDWTDL NEMVTAASYTPDGQGAIIGSHKGSCRFYKTTGGADRHRDEEAQVAGEEDHRLPGFKNT SSQISAAYTSDGRYVVCPSEDSHVYLWRAARGAPPAAAAIGSIGGIGMKPKTWCTIRS FENFYCKDVSAAVPWPLAPSGAGGDGSTSGSSPSRRQGGVSCTDDVCSMPAKSGELGS AGTPLTHSGQLGSPAPGGGKGGADGNAWGLVVVTASLQGEIRVYQNFGMPFRIRGQGN LFY</aaseq>

Gene Sequence

<dnaseqindica>2053..2600#1694..1759#1515..1566#1162..1319#1..1060#atggctaaacgtgatctccccaccgccgccgtgcccccgacgacgccgccgccggcggcggcagcggcggcggcagcgccggtggataaaggccgcaccgacgacggcggcggcaaggaccgcgacgacgcgaccaagaaccaggagagcagcaaggaggtcgccgtcgtcgcggcgcccaaggatgccgcccccgcgtcgaacacccagaccggcgtgcagctggggctagaggagatcgagaagttcatcggcaacacccccatcgtgaagcacctgatgcggcgcggccagagccagcatcacagcggccagctcgcgtcgccctccggcggcgcgccgcccaaggccgagaagccggcgggcggcaagaagaagggaggctggctcaagaacatcaagtccgtcgccatcggcttcatcgacagcggcggcaacagcaagtcgaccacatccacgaccacctcctccgccggcgccaacgccacctcgtcgtcgtcatcctcggcgtcgtcgacggagcggctcaaggtgcaccaatccggcaagtcgtgcaaggagctcaccgggctgtacatgtgccaggagatcatggcgcacgaggggtcgatctggagcatcaagttcagcaccgacggccggtggctggccagcgccggcgaggaccacgtggtgcgcatctggcaggtggtggaggcgaactccccggcgtgcctgccgaacgacggccactcgggccccctcccgccgcatccccccggcgccgcgccggcggacgggacgtcgtcgtcgtcgacgccagcgctgtcccagctgtccaagaagtcggtgaaggggaagagcggcagggacacgctgccggagcacctcgtcgtccccgacaaggtgttcgcgctcgccgaccagccggcgtgcgtcctcgagggccaccaggacgacgtgctcgacctcacctggtccaagaccgaccagcttctctcctcctccatggacaagacggtgaggctttgggacaccaccaccaaggcctgcctcaaggtgttcgcccacaacgactacggtcagcgtcgccattgattcgtttctttgtttcgaaatcgatatctcttgacaataatccatctcaagaattgaattgaattgatttgatcgatcttgcagtgacttgcatccagttcaacccggcggacgacaggttcttcatcagtggatcgctggacgccaaggtgcggctatggagtatccctgatcggcaggtcgtcgactggaccgacctcaacgagatggtcaccgccgcctcctacacccccgatggccaggtatctactctcgctagtctaatataaagtgaattgtccgttttttctcatcagcttaagctttttaagttgaactagttggtgcatacaactcaatattcactgtcatttcatcttccatagctcaacaattccgtatccattttacttctctttttttctctgaattctgatgtgtgaacaattcgaatcaagggcgccatcatcggctcgcacaagggtagctgccggttctacaagacaacaggtagtacagtacattctctgttcttcattgactcatcagatgatcagactgacatccagttgcactgaagtgatcaatttgattgcggatttttttgggttttgttgcagattgcaagctggatcaggaggcgcagatcgacatcgagacgaagaagcgcaagtcgcaggcgaagaagatcaccggcttccaggtacatgaacacaatgcatcacactttgactagctgctgaaatttaagagcttggcaagaacatggcctaattgttcatcttggccatggccatggacacctcagtttgctccggggaacccctccgaggtgctggtcacctccgccgactcgcagatccgcgtcttcgacggcgtcaccatggtccaaaaattcagaggtgcgctggcggcggccatggatgagaaaatctcagctctaattgaaaatcagagagatcaattaatggtggtggtgtccgtggtggatgtcaggtttcaagaacacgagcagccagatctcggcggcgtacacgtcggacgggcggtacgtggtgtgcccgagcgaggactcgcacgtctacctgtggcgcgcggcgcgcggcgcgccgccggcggcggcggccatcggcagcatcggcggcatcggcatgaagcccaagacgtggtgcaccatccgctccttcgagaacttctactgcaaggacgtctccgccgccgtgccgtggccgctggccccctccggcgccggcggcgacgggtcgacctccggcagctcgccgtcgcggcggcagggcggcgtgtcgtgcaccgacgacgtgtgcagcatgccggcgaagagcggcgagctgggcagcgccgggacgccgctgacgcactccggccagctaggctcgccggcgccaggaggcggcaagggcggcgccgacggcaatgcgtggggattggtggtggtgacggcgagcttacagggcgagattagggtttatcaaaactttggaatgccgttcaggataagaggccagggtaacctgttctactga</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0178633, RefSeq:Os12g0178633