Os12g0180400

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Revision as of 10:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0180400| Description = Similar to DNA-directed RNA polymerase II 7.6 kDa polypeptide (EC 2.7.7.6) (RPB10) (RPB7.6)| Version = NM_001072844.1...")
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Gene Name

Os12g0180400

Description

Similar to DNA-directed RNA polymerase II 7.6 kDa polypeptide (EC 2.7.7.6) (RPB10) (RPB7.6)

Version

NM_001072844.1 GI:115487649 GeneID:4351671

Length

2605 bp

Definition

Oryza sativa Japonica Group Os12g0180400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:4050823..4053427

Sequence Coding Region

4050917..4050952,4051353..4051411,4052990..4053084,4053162..4053190

Expression

GEO Profiles:Os12g0180400

Genome Context

<gbrowseImage1> name=NC_008405:4050823..4053427 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:4050823..4053427 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcatcccggtgcggtgcttcacctgcgggaaggtgattgggaacaagtgggatctgtacctggatctcctccaggctgactacacagagggggatgctctggatgcattgggtttggtccgttactgctgccggcgaatgctcatgacccatgttgacctcatcgagaagttactcaactacaacacgctggagaagaccgagacagcaggttaa</cdnaseq>

Protein Sequence

<aaseq>MIIPVRCFTCGKVIGNKWDLYLDLLQADYTEGDALDALGLVRYC CRRMLMTHVDLIEKLLNYNTLEKTETAG</aaseq>

Gene Sequence

<dnaseqindica>95..130#531..589#2168..2262#2340..2368#ctccctttcgaaacgcgcaaaaaccctctccgactctccccttctcccactcttctccggcggcggcggcggcggcggcgggagcgcatcggagatgatcatcccggtgcggtgcttcacctgcgggaaggtagaaaatctcccagacatgacgtcctccacgtattttacctcccccaccgtttcccatctagggctaccggctaacggcccccgcttcgccgccggcggagaaggcggcggcggcggcgggcggttgggctgctttttctcttgcggttccgtccgattcgatgcgttccctgatgcctccgcggctccgctgccgctacttcgcgcctccgttagggcacgctgctcgttagggtttcggtcgcttctagattctgcagtgtagcttttgctctcgtgagattccctagttgtttaatttgtgtggccagtggtttgtacgcatgagattggttggttggttggattagggtttagtggtaaggaagtgctcatatttttttccccatatttcgcaggtgattgggaacaagtgggatctgtacctggatctcctccaggctgactacacagaggggtaatgatgatttgcatctcatctctgggagcatgcatttgtgatgttggtttgattacttaatacttttttaagtgattttggatatagtcaagttaatgttgatatatattttggtgaaagcaatccaatttagcagacctgagcatctgtacctattcagttcctcgagtcagaagtacaagtgactgggaaaatttattgtttttctgctcaaaatgattgcttctatgggatatgatattatagaaatctgttgtaattgatcatttgcagtgcaaacatataagaagtgaacacttgctgctttatttatgcgtgtattctccactttattacccctgcaatttgtttgtgaaaatcatcctccttccccccttctctttcccaagcttacctagcagttttggttaagaggtgagtggaagtgagggaaaaaaaagagtcaagactgtgttgtttgtagggaatatgggggaaaacaaatacggaaataagtcagagtacaatgtaacatgaagctgttatctcttaatgttgtcacatttagagtgggaaatcatcaatctttctgattctataagaccttgacctatgcattccaacctgcaagctttatttgttcatatcttggaaactgatgatccaaggggtgtttacctttgtttagataagccaattcatttctactttccctacgagttaatctgtttgtttacctctggcttgtctgtgcaaatcatgattgttaaggtgtagctatggcgtcgctgtagcgtcaccatagtggtaaggcggtggcaagtgtcaaggcatacgcccgccttaccagcaaaaccagtggagaaagggaaaggagacggcaaaaccagtagaaaaagagaaagtagaaggggataagctcatcgcctcatcctggaaccctagaatcctagatagcttgtggtcaccttcttccacgtcgcagccagcttgctgttgtagatcccatgtccctgccataagatctagctccagatccaagctgctgctgcttgctgcggttcttatctcttgcagtggcagtggaagacagcgaggggaggagaggtattggggtctaatggccgcgacagagatggtctgctatgggggaggtggccgccggctggcggatggagatgctgatctcagcgtgcacatgtggtgctctccttcgtcaactagccgcgcacgatgcgtcgatgcctcttagggcacaagagatgtgggggtagttgatgttggttttttgtggactggcagcctggcctggtgggcttttctccttttcctttctattttctttgcaaatctctcccttaatcacgcctcagccacctcgtattgcgtcgccttgccttacaccttgctcgctatagcgctgaggtgtacactcgtctccataaacgccttagcgccttaacaacactggtgcaagtacatatgtatctttggaaatgattatgagctgttattagtttttgacatgctgttgactctatctatgtacatgttattaattttttttacatactttctacgactttctgttgtcagggatgctctggatgcattgggtttggtccgttactgctgccggcgaatgctcatgacccatgttgacctcatcgagaagttactcaactacaacagtaagtttacactgctatagaagctatagtttgctttctttcctgttcccttatcaagtgacaattttgaatttcagcgctggagaagaccgagacagcaggttaagttgacccagcatgctccagaactcttgttccttattgcctttgttcacgaatgttccaaggaatttgtgtgatgatccatgctgcatttcaactatgtaactgttaccgtgatgtcagatgatggaagtgatataactagtgggcagagtacctctggttgtgtgtgaacttgttttcaagacttttatatcaaggggggtatgttcctgcagtaattttcttattgtgatttgct</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0180400, RefSeq:Os12g0180400