Os12g0182200

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Revision as of 10:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0182200| Description = Similar to Dihydrolipoamide S-acetyltransferase| Version = NM_001072851.1 GI:115487663 GeneID:4351678| Length = 4915...")
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Gene Name

Os12g0182200

Description

Similar to Dihydrolipoamide S-acetyltransferase

Version

NM_001072851.1 GI:115487663 GeneID:4351678

Length

4915 bp

Definition

Oryza sativa Japonica Group Os12g0182200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:4171047..4175961

Sequence Coding Region

4171360..4171464,4171561..4171644,4171735..4171805,4174529..4174616,4174706..4174897
,4174986..4175849

Expression

GEO Profiles:Os12g0182200

Genome Context

<gbrowseImage1> name=NC_008405:4171047..4175961 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:4171047..4175961 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccctcctccacctccagtcctccgccaccgccgccgcggcgccctccttcctcctcctccgccgccgcggcggcggcgtcacggcgccggcagggagcagccggcggcggcgggcgtgcttccgcgtggaggcgaagatccgggagatcttcatgccggcgctgagctcgaccatgacggaggggaagatcgtgtcgtggacggcctccgagggggaccgcctcgccaagggcgaccccgtcgtcgtcgtcgagtccgacaaggccgacatggacgtcgagaccttccacgacggcttcctcgccgccgtcctcgtccccgccggcgagtccgcccccgtcggctccgccatcgcgctcctcgccgagtccgaggacgagatccccgccgcccagtccaaggccgcctccctctcctcctcctcctcctcctctccaccacctccgcctccccaagaatcaacccctccccctcccccgccacctcctccagcgccagtagcagcagcagtctccgctcccgcgcctccatccccagcctcgcaaggcggcttgcgcgtggtcgcgtcgccgtacgccaggaagctagccaaggacctcaacgtcgatctcaactccattaccggctctggccctggcgggcggatagtggccaaggacgtcgaggcggcggcggctgcgccaaagaaggcggcgcccgtggcggctgctcggcccgatgtgccgctgggttcgacggtgccattcacgacaatgcagggtgccgtcagcaagaacatggtggagagcctcgccgtgccgacgttcagagtcggttacaccttcacaaccgatgctctggatgcactctacaagaagattaagccgaagggtgtgacaatgtcggccctgttggcgaaggcgactgcaatggcgctcgtgcaacacccggttataaactccagctgcagagatgggaagagcttcacttacaacagcagcataaacatcgctgtggcagtggccatcgatggtgggttgattacgccagtgcttcctgatgctgataagctcgacatttattctttgtcgaggaaatggaaggagttagtcgataaggctcgagcgaagcagctacagccccatgaatacaattctggcacctttactatttcaaaccttggtatgtttggagttgacagatttgatgcaatcttgccacctggaactggtgcaatcatggccgttggatcatcacaaccaacacttgttggtacaaaagatggtagtattgggatcaagaaccaaatgcaggtcaatgttactgctgatcatcgggttatttacggagctgatcttgccgcttttctgcaaactctttccaagataattgaggatcccaaggaccttacattttag</cdnaseq>

Protein Sequence

<aaseq>MAALLHLQSSATAAAAPSFLLLRRRGGGVTAPAGSSRRRRACFR VEAKIREIFMPALSSTMTEGKIVSWTASEGDRLAKGDPVVVVESDKADMDVETFHDGF LAAVLVPAGESAPVGSAIALLAESEDEIPAAQSKAASLSSSSSSSPPPPPPQESTPPP PPPPPPAPVAAAVSAPAPPSPASQGGLRVVASPYARKLAKDLNVDLNSITGSGPGGRI VAKDVEAAAAAPKKAAPVAAARPDVPLGSTVPFTTMQGAVSKNMVESLAVPTFRVGYT FTTDALDALYKKIKPKGVTMSALLAKATAMALVQHPVINSSCRDGKSFTYNSSINIAV AVAIDGGLITPVLPDADKLDIYSLSRKWKELVDKARAKQLQPHEYNSGTFTISNLGMF GVDRFDAILPPGTGAIMAVGSSQPTLVGTKDGSIGIKNQMQVNVTADHRVIYGADLAA FLQTLSKIIEDPKDLTF</aaseq>

Gene Sequence

<dnaseqindica>4498..4602#4318..4401#4157..4227#1346..1433#1065..1256#113..976#actcccgaggcacccgcgactcctcaaagcctcgcctcgcgtcgcgccgcggcgcaccacccctccctccccctctccgccccgccccaccccacccccgcgcgacctcgcaatggccgccctcctccacctccagtcctccgccaccgccgccgcggcgccctccttcctcctcctccgccgccgcggcggcggcgtcacggcgccggcagggagcagccggcggcggcgggcgtgcttccgcgtggaggcgaagatccgggagatcttcatgccggcgctgagctcgaccatgacggaggggaagatcgtgtcgtggacggcctccgagggggaccgcctcgccaagggcgaccccgtcgtcgtcgtcgagtccgacaaggccgacatggacgtcgagaccttccacgacggcttcctcgccgccgtcctcgtccccgccggcgagtccgcccccgtcggctccgccatcgcgctcctcgccgagtccgaggacgagatccccgccgcccagtccaaggccgcctccctctcctcctcctcctcctcctctccaccacctccgcctccccaagaatcaacccctccccctcccccgccacctcctccagcgccagtagcagcagcagtctccgctcccgcgcctccatccccagcctcgcaaggcggcttgcgcgtggtcgcgtcgccgtacgccaggaagctagccaaggacctcaacgtcgatctcaactccattaccggctctggccctggcgggcggatagtggccaaggacgtcgaggcggcggcggctgcgccaaagaaggcggcgcccgtggcggctgctcggcccgatgtgccgctgggttcgacggtgccattcacgacaatgcagggtgccgtcagcaagaacatggtggagagcctcgccgtgccgacgttcagagtcggttacaccttcacaaccgatgctctggatgcactctacaagaaggtgactgcctctgcaattcttgtttctcttagattagtactattatgcagtggtgggatggttgtgtaaatgagtgatgttttgacagattaagccgaagggtgtgacaatgtcggccctgttggcgaaggcgactgcaatggcgctcgtgcaacacccggttataaactccagctgcagagatgggaagagcttcacttacaacagcagcataaacatcgctgtggcagtggccatcgatggtgggttgattacgccagtgcttcctgatgctgataaggtacagtgcttgtaattgttgcatatacttaaaattggtgtttatgatggcgtctcttgatgaaaatggttaattgttggtttatgcagctcgacatttattctttgtcgaggaaatggaaggagttagtcgataaggctcgagcgaagcagctacagccccatgaatacaattctggtactttctttgtccgtacacaaaattaaatgtgtagctcattgatattcaattttctatatattatctgagatggttataaggaatcaactgttcttggtgaatccatgccaatgaggcctgaacaacagaatgtggtataggttcctttagttgtgtccttaattttatttgttggatcaaaactattccattccatacaaattttttggtaaggtttttaaaagttagcagcctccacatagaacttggtaacttgcttagagttgtatgttgaagttcaaaatgcagctcacagcatatacagtttttttgtaagaaataaatactaccatttctaaaacatgtcattgccttatttcaggtacttattgtattcatttttttttacacttctagtttgccttcctgccatactgtcctattttagattcttatggagcacttgcaattctgaatataggagaatttcatgtgctccatggaacacgggagcacctaagcttcaaaccaacaaaaatacatgtaaatgtttaggaaaaaaaatcagaaattatttcgtggcatccatcacagtatcaccacattcgctagttcacaccacaaaatttaaaatctacatccaatctacatatggataaacacttacacaggtgctctagtacctgaaattctcccatattggtatccattgtcttagttgtgtcatgatatccggaggagtacctgttggttacttggtttccatagctgtgctcatttgatattgtaatgcactaataatcctgaaaaaaatcatccatttgctgtagttctaggattgttcctagagtaatagataggttgatccctggacctttggtatgacacctgtgagcatgctccatactagaatactatcttgttggaggtatgtgccaaggtttagtttttttttaattgtgaaccaagtaacaaaccatataattttattcaaccagtttttttttagctctcatccaagacatttttaatcacaacctgtgtggaaacatatagggtcatttttttaaaaaaaggaattcggaatacaaaaggggccatttttgtgggactaaattggctggtttcaacttcaccctgaagataggttccctaaaacctggcatgtactgactattgagatatcacattccataccaccatttgtttacgtgggagtatgagaccttgaatgaacctaatttcaatttattatatgacctggcacttagctgtaatttgcttaatactgtcttaaatctcgtgtcactccctcctgtcataaatatatgttattttagtccccttcgtaaatatacaacgttctttgctaccaaggacagtattttacaagaactcctgttataccgtcactttcatgaatctcttaaatactcgtacccaccccaatagatgctcttcaggtacttacatttgtcatccaggcatttaagcaacctaattgacacactgtgagctgggagcttaggagctacttcctccgtgccaaaatgtaaacatttttttgaggttggcacgagtattaagaaagtaggtgagtatgattggagcaagtgtgtgattggttgagaagaggaagtagatgaaagggaatggttatgattggttgagaggaggaggtaggtggagaaatagctttattttgagacaaggttttgtgctagaaataactacattttgggacggcggtagtatatctttgcctgtatatgcatgtatggatgcattagaccaatgctctcactcatgaaataatatgggcctgtgaaaattaagagggctagagtgggtctctcttttttcttgaggggaaaacaattagggaagagtttgtctacatattaattcttgtgccacatgctaaaacatgaaggaatgtcaaacggagtgagtggaattttgcgtggctgtaaattcccccttctttctaattcattacaatttttaaaagaaaatgaaaacacctaggaagaactactatgcgtcctttttattaagaagaaaaggcacccaaattcaagctggagaggatcccaacctgggtactcaattcccaaaaactttttccctgatttgtatgaaatttggaaagttaagttattttcacaggatatgcccctgagagaagggcaagcagcgcgatgcactgcatcacatgtgccagactttattaatagtgcttgtacttttgactgagcttctttcagtgctccttcttgttataagcatttgtacattttaaagcaaaagacgtaatgttcccatctaatggtagtccttgattctttcatttggtatggctgttagttctatcgcctgctctagaatctaaatcttaaaataatatgatgctgctatgctgatgacggagacatgcacaccttttttttttttcatttttgtttatggtgattctggcttagtttttttttcattcaactcagcatagaaagtattggaaccatgcatattcatattttgatgagcaaatgttttagaatttcattaattttgagttttcagatcatgtgtttcctcatgtttttagtgtatgtgaaaattgacagcgtattgattaaactacagactcattatagtgcatttgatgaaatgcagaagaaaacatgtatgtatgaactatctaacatctatgctaatggttgttcatattcaaattgcaggcacctttactatttcaaaccttggtatgtttggagttgacagatttgatgcaatcttgccacctggaactgtaagacgaaatttccatcttttaatttctattatcattcaatgctgcttgctgcatgatttatgttattatctttattgctgaaaacagggtgcaatcatggccgttggatcatcacaaccaacacttgttggtacaaaagatggtagtattgggatcaagaaccaaatgcaggtaaatttaatcatagctgtgccacactttctttctcacaagccaattatgaagtttttttttggcttaatttctcacctgaccaatacatcttaggtcaatgttactgctgatcatcgggttatttacggagctgatcttgccgcttttctgcaaactctttccaagataattgaggatcccaaggaccttacattttagacacatccagcaattgtttttccctgaggcaattgcgataggatatgcttccccgtagatgtgtagcatgtgtttctggtcatgtaagttagttgtttaagctgtcacctatgttggtatggggtaacttcactggctggttaccttcttatcattggtttgttcaataagcttttacaattttattgggataggggccgagtatgatacatattgcctttcaccggaagactgattttttattttgtcgagctcgatgtacaatggatccatgccctgaatacaacgaaatgaaacagtgttacagcttgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0182200, RefSeq:Os12g0182200